RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
TTC39B-201ENST00000297615 SNAP23O00161 211 aa16.3■□□□□ 0.2
TTC39B-201ENST00000297615 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
TTC39B-201ENST00000297615 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
TTC39B-201ENST00000297615 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
TTC39B-201ENST00000297615 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
TTC39B-201ENST00000297615 ZCRB1Q8TBF4 217 aaKnown RBP16.3■□□□□ 0.2
TTC39B-201ENST00000297615 SLAIN2Q9P270 581 aa16.3■□□□□ 0.2
TTC39B-201ENST00000297615 SGSM2O43147 1006 aa16.29■□□□□ 0.2
TTC39B-201ENST00000297615 FKBP4Q02790 459 aaKnown RBP eCLIP16.29■□□□□ 0.2
TTC39B-201ENST00000297615 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
TTC39B-201ENST00000297615 OSBPL3Q9H4L5 887 aa16.29■□□□□ 0.2
TTC39B-201ENST00000297615 LRRC24Q50LG9 513 aa16.28■□□□□ 0.2
TTC39B-201ENST00000297615 CWC22Q9HCG8 908 aaKnown RBP16.28■□□□□ 0.2
TTC39B-201ENST00000297615 FGD1P98174 961 aa16.28■□□□□ 0.2
TTC39B-201ENST00000297615 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
TTC39B-201ENST00000297615 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
TTC39B-201ENST00000297615 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.2
TTC39B-201ENST00000297615 ARID3AQ99856 593 aa16.27■□□□□ 0.2
TTC39B-201ENST00000297615 BTG4Q9NY30 223 aa16.27■□□□□ 0.2
TTC39B-201ENST00000297615 NALCNQ8IZF0 1738 aa16.27■□□□□ 0.2
TTC39B-201ENST00000297615 RAB11FIP3O75154 756 aa16.27■□□□□ 0.2
TTC39B-201ENST00000297615 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
TTC39B-201ENST00000297615 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
TTC39B-201ENST00000297615 GOLIM4O00461 696 aa16.27■□□□□ 0.19
TTC39B-201ENST00000297615 PI16Q6UXB8 463 aa16.27■□□□□ 0.19
TTC39B-201ENST00000297615 RBM8AQ9Y5S9 174 aaKnown RBP16.27■□□□□ 0.19
TTC39B-201ENST00000297615 MEGF6O75095 1541 aa16.27■□□□□ 0.19
TTC39B-201ENST00000297615 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
TTC39B-201ENST00000297615 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
TTC39B-201ENST00000297615 RUFY3Q7L099 469 aa16.26■□□□□ 0.19
TTC39B-201ENST00000297615 DNAJC10Q8IXB1 793 aa16.26■□□□□ 0.19
TTC39B-201ENST00000297615 DBNLQ9UJU6 430 aaKnown RBP16.26■□□□□ 0.19
TTC39B-201ENST00000297615 TOPAZ1Q8N9V7 1692 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 PTMSP20962 102 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 MSNP26038 577 aaKnown RBP16.25■□□□□ 0.19
TTC39B-201ENST00000297615 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
TTC39B-201ENST00000297615 STAP2Q9UGK3 403 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
TTC39B-201ENST00000297615 METTL22Q9BUU2 404 aaPredicted RBP16.25■□□□□ 0.19
TTC39B-201ENST00000297615 TFIP11Q9UBB9 837 aaKnown RBP16.25■□□□□ 0.19
TTC39B-201ENST00000297615 UTRNP46939 3433 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 CLCN1P35523 988 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 HAND2P61296 217 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 GORABQ5T7V8 394 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 DCAF5Q96JK2 942 aa16.25■□□□□ 0.19
TTC39B-201ENST00000297615 PTMAP06454 111 aaKnown RBP16.24■□□□□ 0.19
TTC39B-201ENST00000297615 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
TTC39B-201ENST00000297615 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
TTC39B-201ENST00000297615 TAF7LQ5H9L4 462 aa16.24■□□□□ 0.19
TTC39B-201ENST00000297615 FAM182BQ5T319 152 aa16.24■□□□□ 0.19
TTC39B-201ENST00000297615 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
TTC39B-201ENST00000297615 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
TTC39B-201ENST00000297615 LTN1O94822 1766 aa16.23■□□□□ 0.19
TTC39B-201ENST00000297615 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
TTC39B-201ENST00000297615 HSPA4P34932 840 aa16.23■□□□□ 0.19
TTC39B-201ENST00000297615 HSP90AB4PQ58FF6 505 aa16.23■□□□□ 0.19
TTC39B-201ENST00000297615 VPS53Q5VIR6 699 aa16.23■□□□□ 0.19
TTC39B-201ENST00000297615 GUCY1B3Q02153 619 aa16.22■□□□□ 0.19
TTC39B-201ENST00000297615 FBXW7Q969H0 707 aa16.22■□□□□ 0.19
TTC39B-201ENST00000297615 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
TTC39B-201ENST00000297615 ALDH1L1O75891 902 aa16.22■□□□□ 0.19
TTC39B-201ENST00000297615 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
TTC39B-201ENST00000297615 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
TTC39B-201ENST00000297615 USP48Q86UV5 1035 aa16.22■□□□□ 0.19
TTC39B-201ENST00000297615 SPATA31A3Q5VYP0 1347 aa16.21■□□□□ 0.19
TTC39B-201ENST00000297615 CCDC173Q0VFZ6 552 aa16.21■□□□□ 0.19
TTC39B-201ENST00000297615 GJB2P29033 226 aa16.21■□□□□ 0.19
TTC39B-201ENST00000297615 CCT2P78371 535 aaKnown RBP16.2■□□□□ 0.18
TTC39B-201ENST00000297615 IQSEC3Q9UPP2 1182 aaPredicted RBP16.2■□□□□ 0.18
TTC39B-201ENST00000297615 FMN2Q9NZ56 1722 aa16.2■□□□□ 0.18
TTC39B-201ENST00000297615 CREB3L3Q68CJ9 461 aa16.2■□□□□ 0.18
TTC39B-201ENST00000297615 TTLL5Q6EMB2 1281 aa16.2■□□□□ 0.18
TTC39B-201ENST00000297615 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
TTC39B-201ENST00000297615 NFAT5O94916 1531 aa16.2■□□□□ 0.18
TTC39B-201ENST00000297615 DNM1Q05193 864 aaKnown RBP16.2■□□□□ 0.18
TTC39B-201ENST00000297615 CAMK4Q16566 473 aa16.2■□□□□ 0.18
TTC39B-201ENST00000297615 ME3Q16798 604 aa16.2■□□□□ 0.18
TTC39B-201ENST00000297615 WASHC4Q2M389 1173 aa16.2■□□□□ 0.18
TTC39B-201ENST00000297615 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
TTC39B-201ENST00000297615 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
TTC39B-201ENST00000297615 BRD1O95696 1058 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 IL2RBP14784 551 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 ZKSCAN1P17029 563 aaPredicted RBP16.19■□□□□ 0.18
TTC39B-201ENST00000297615 ADORA1P30542 326 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 HLFQ16534 295 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 RAD50Q92878 1312 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 SYT1P21579 422 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 TNNI3KQ59H18 835 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 GPHNQ9NQX3 736 aaPredicted RBP16.19■□□□□ 0.18
TTC39B-201ENST00000297615 BABAM1Q9NWV8 329 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 TPCN1Q9ULQ1 816 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 FPGT-TNNI3KV9GXZ4 949 aa16.19■□□□□ 0.18
TTC39B-201ENST00000297615 RGPD5Q99666 1765 aa16.18■□□□□ 0.18
TTC39B-201ENST00000297615 HOXB7P09629 217 aa16.18■□□□□ 0.18
TTC39B-201ENST00000297615 ZNF830Q96NB3 372 aaPredicted RBP16.18■□□□□ 0.18
TTC39B-201ENST00000297615 ISY1Q9ULR0 285 aaKnown RBP16.18■□□□□ 0.18
TTC39B-201ENST00000297615 JAK2O60674 1132 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms