RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 GIGYF1O75420 1035 aaPredicted RBP22.86■■□□□ 1.25
LSM12-201ENST00000293406 KRT85P78386 507 aa22.86■■□□□ 1.25
LSM12-201ENST00000293406 C17orf53Q8N3J3 647 aaPredicted RBP22.86■■□□□ 1.25
LSM12-201ENST00000293406 LRRC59Q96AG4 307 aaKnown RBP22.86■■□□□ 1.25
LSM12-201ENST00000293406 SPTLC3Q9NUV7 552 aa22.86■■□□□ 1.25
LSM12-201ENST00000293406 NFAT5O94916 1531 aa22.86■■□□□ 1.25
LSM12-201ENST00000293406 LMO7Q8WWI1 1683 aa22.85■■□□□ 1.25
LSM12-201ENST00000293406 SLC27A2O14975 620 aa22.85■■□□□ 1.25
LSM12-201ENST00000293406 RNMTO43148 476 aaKnown RBP22.85■■□□□ 1.25
LSM12-201ENST00000293406 G3BP1Q13283 466 aaKnown RBP eCLIP22.85■■□□□ 1.25
LSM12-201ENST00000293406 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
LSM12-201ENST00000293406 PKNOX2Q96KN3 472 aa22.85■■□□□ 1.25
LSM12-201ENST00000293406 AP5Z1O43299 807 aa22.84■■□□□ 1.25
LSM12-201ENST00000293406 SASH1O94885 1247 aa22.84■■□□□ 1.25
LSM12-201ENST00000293406 AMOTQ4VCS5 1084 aa22.84■■□□□ 1.25
LSM12-201ENST00000293406 EAF2Q96CJ1 260 aaPredicted RBP22.84■■□□□ 1.25
LSM12-201ENST00000293406 ADGRL3Q9HAR2 1447 aa22.84■■□□□ 1.25
LSM12-201ENST00000293406 GRM8O00222 908 aa22.83■■□□□ 1.25
LSM12-201ENST00000293406 PDCP20941 246 aa22.83■■□□□ 1.25
LSM12-201ENST00000293406 TTC6Q86TZ1 520 aa22.83■■□□□ 1.25
LSM12-201ENST00000293406 SUCLG2Q96I99 432 aa22.83■■□□□ 1.25
LSM12-201ENST00000293406 CCDC8Q9H0W5 538 aaPredicted RBP22.83■■□□□ 1.25
LSM12-201ENST00000293406 RNF20Q5VTR2 975 aa22.83■■□□□ 1.25
LSM12-201ENST00000293406 CDC37L1Q7L3B6 337 aa22.83■■□□□ 1.25
LSM12-201ENST00000293406 KCNH5Q8NCM2 988 aa22.83■■□□□ 1.25
LSM12-201ENST00000293406 LINS1Q8NG48 757 aa22.83■■□□□ 1.25
LSM12-201ENST00000293406 ANKRD1Q15327 319 aa22.82■■□□□ 1.24
LSM12-201ENST00000293406 BLOC1S2Q6QNY1 142 aa22.82■■□□□ 1.24
LSM12-201ENST00000293406 FERMT3Q86UX7 667 aa22.82■■□□□ 1.24
LSM12-201ENST00000293406 BICC1Q9H694 974 aaKnown RBP22.82■■□□□ 1.24
LSM12-201ENST00000293406 SNRKQ9NRH2 765 aa22.82■■□□□ 1.24
LSM12-201ENST00000293406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.82■■□□□ 1.24
LSM12-201ENST00000293406 SETD1BQ9UPS6 1966 aaKnown RBP22.82■■□□□ 1.24
LSM12-201ENST00000293406 TPM3P06753 285 aa22.82■■□□□ 1.24
LSM12-201ENST00000293406 ELP1O95163 1332 aa22.82■■□□□ 1.24
LSM12-201ENST00000293406 KAZALD1Q96I82 304 aa22.81■■□□□ 1.24
LSM12-201ENST00000293406 FSD1Q9BTV5 496 aa22.81■■□□□ 1.24
LSM12-201ENST00000293406 NCAPD2Q15021 1401 aa22.81■■□□□ 1.24
LSM12-201ENST00000293406 A0A0D9SFI3 127 aa22.81■■□□□ 1.24
LSM12-201ENST00000293406 PRAMEF22A3QJZ6 481 aa22.81■■□□□ 1.24
LSM12-201ENST00000293406 MAP3K11Q16584 847 aa22.81■■□□□ 1.24
LSM12-201ENST00000293406 NUP62CLQ9H1M0 184 aa22.81■■□□□ 1.24
LSM12-201ENST00000293406 CHMP3Q9Y3E7 222 aa22.81■■□□□ 1.24
LSM12-201ENST00000293406 CHD2O14647 1828 aaKnown RBP22.81■■□□□ 1.24
LSM12-201ENST00000293406 DDX58O95786 925 aaKnown RBP22.8■■□□□ 1.24
LSM12-201ENST00000293406 COL9A3Q14050 684 aaPredicted RBP22.8■■□□□ 1.24
LSM12-201ENST00000293406 BOLA2Q9H3K6 86 aa22.8■■□□□ 1.24
LSM12-201ENST00000293406 TLR7Q9NYK1 1049 aaKnown RBP22.8■■□□□ 1.24
LSM12-201ENST00000293406 UTYO14607 1347 aa22.8■■□□□ 1.24
LSM12-201ENST00000293406 GOLGA6L6A8MZA4 724 aa22.8■■□□□ 1.24
LSM12-201ENST00000293406 GTF2F1P35269 517 aaKnown RBP eCLIP22.8■■□□□ 1.249e-10■■■■■ 30.7
LSM12-201ENST00000293406 PSME1Q06323 249 aa22.8■■□□□ 1.24
LSM12-201ENST00000293406 FAM200AQ8TCP9 573 aa22.8■■□□□ 1.24
LSM12-201ENST00000293406 HEG1Q9ULI3 1381 aa22.8■■□□□ 1.24
LSM12-201ENST00000293406 RGPD2P0DJD1 1756 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 PXDNQ92626 1479 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 RPS6KB1P23443 525 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 FAM173BQ6P4H8 233 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 SPC24Q8NBT2 197 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 TCEANC2Q96MN5 208 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 LIG1P18858 919 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 KIAA1524Q8TCG1 905 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 ARID3AQ99856 593 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 SIL1Q9H173 461 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 KCNF1Q9H3M0 494 aa22.79■■□□□ 1.24
LSM12-201ENST00000293406 AIMP1Q12904 312 aaKnown RBP22.78■■□□□ 1.24
LSM12-201ENST00000293406 CAMK4Q16566 473 aa22.78■■□□□ 1.24
LSM12-201ENST00000293406 OVOS2A0A0G2JMS6 1433 aa22.78■■□□□ 1.24
LSM12-201ENST00000293406 NPHP4O75161 1426 aaPredicted RBP22.78■■□□□ 1.24
LSM12-201ENST00000293406 SCAND2PQ9GZW5 306 aaPredicted RBP22.77■■□□□ 1.24
LSM12-201ENST00000293406 ALDH8A1Q9H2A2 487 aaPredicted RBP22.77■■□□□ 1.24
LSM12-201ENST00000293406 GOLGA6L4A6NEF3 574 aa22.77■■□□□ 1.24
LSM12-201ENST00000293406 TYRO3Q06418 890 aa22.77■■□□□ 1.24
LSM12-201ENST00000293406 JARID2Q92833 1246 aaPredicted RBP22.77■■□□□ 1.24
LSM12-201ENST00000293406 MED23Q9ULK4 1368 aa22.77■■□□□ 1.23
LSM12-201ENST00000293406 DDX21Q9NR30 783 aaKnown RBP eCLIP22.76■■□□□ 1.23
LSM12-201ENST00000293406 PYCARDQ9ULZ3 195 aa22.76■■□□□ 1.23
LSM12-201ENST00000293406 MRVI1Q9Y6F6 885 aa22.76■■□□□ 1.23
LSM12-201ENST00000293406 TOB2Q14106 344 aaPredicted RBP22.76■■□□□ 1.23
LSM12-201ENST00000293406 SPATA32Q96LK8 384 aa22.76■■□□□ 1.23
LSM12-201ENST00000293406 TNMDQ9H2S6 317 aa22.76■■□□□ 1.23
LSM12-201ENST00000293406 HMG20BQ9P0W2 317 aa22.76■■□□□ 1.23
LSM12-201ENST00000293406 TAF6LQ9Y6J9 622 aa22.76■■□□□ 1.23
LSM12-201ENST00000293406 LARP1Q6PKG0 1096 aaKnown RBP22.75■■□□□ 1.23
LSM12-201ENST00000293406 TSC1Q92574 1164 aa22.75■■□□□ 1.23
LSM12-201ENST00000293406 DACT1Q9NYF0 836 aa22.75■■□□□ 1.23
LSM12-201ENST00000293406 KIF3AQ9Y496 699 aa22.75■■□□□ 1.23
LSM12-201ENST00000293406 ESCO1Q5FWF5 840 aa22.75■■□□□ 1.23
LSM12-201ENST00000293406 STK3Q13188 491 aa22.74■■□□□ 1.23
LSM12-201ENST00000293406 ZNF589Q86UQ0 364 aaPredicted RBP22.74■■□□□ 1.23
LSM12-201ENST00000293406 TFIP11Q9UBB9 837 aaKnown RBP22.74■■□□□ 1.23
LSM12-201ENST00000293406 NPHP3Q7Z494 1330 aa22.74■■□□□ 1.23
LSM12-201ENST00000293406 RIC3Q7Z5B4 369 aa22.74■■□□□ 1.23
LSM12-201ENST00000293406 LUZP1Q86V48 1076 aa22.74■■□□□ 1.23
LSM12-201ENST00000293406 CKAP2LQ8IYA6 745 aa22.74■■□□□ 1.23
LSM12-201ENST00000293406 PHRF1Q9P1Y6 1649 aaKnown RBP22.74■■□□□ 1.23
LSM12-201ENST00000293406 IGKV5-2P06315 115 aa22.73■■□□□ 1.23
LSM12-201ENST00000293406 TSGA10IPQ3SY00 556 aa22.73■■□□□ 1.23
LSM12-201ENST00000293406 KLHDC4Q8TBB5 520 aa22.73■■□□□ 1.23
LSM12-201ENST00000293406 DDX19AQ9NUU7 478 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms