RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
NPC1L1-201ENST00000289547 USP25Q9UHP3 1055 aa13.37□□□□□ -0.27
NPC1L1-201ENST00000289547 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
NPC1L1-201ENST00000289547 CCP110O43303 1012 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 VPS53Q5VIR6 699 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 UBXN4Q92575 508 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 CLSTN1O94985 981 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 PARP10Q53GL7 1025 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 CHD1LQ86WJ1 897 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 CHPF2Q9P2E5 772 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 RAI14Q9P0K7 980 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 CPS1P31327 1500 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
NPC1L1-201ENST00000289547 CPLX1O14810 134 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 ANKRD18AQ8IVF6 992 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 FAM177A1Q8N128 213 aaPredicted RBP13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 PRIMPOLQ96LW4 560 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 PHKG2P15735 406 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 PI4KAP2A4QPH2 592 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 ATP5J2-PTCD1G3V325 749 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 GTF2F1P35269 517 aaKnown RBP eCLIP13.35□□□□□ -0.271e-7■■■■■ 30
NPC1L1-201ENST00000289547 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 PI4KAP1Q8N8J0 262 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 CNBD1Q8NA66 436 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 SSH1Q8WYL5 1049 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 OFD1O75665 1012 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 TRIM37O94972 964 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 AACSQ86V21 672 aa13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 PCMTD1Q96MG8 357 aaPredicted RBP13.35□□□□□ -0.27
NPC1L1-201ENST00000289547 PER1O15534 1290 aaPredicted RBP13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 PDCP20941 246 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 HOXB7P09629 217 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 USP8P40818 1118 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 SART3Q15020 963 aaKnown RBP13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 KSR2Q6VAB6 950 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 NFXL1Q6ZNB6 911 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 ZSCAN29Q8IWY8 852 aaPredicted RBP13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 RBM17Q96I25 401 aaKnown RBP13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 IGSF3O75054 1194 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 ERBB3P21860 1342 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 ALDH1L1O75891 902 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 TBC1D32Q96NH3 1257 aa13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 HOOK1Q9UJC3 728 aaKnown RBP13.34□□□□□ -0.27
NPC1L1-201ENST00000289547 JDP2Q8WYK2 163 aa13.33□□□□□ -0.27
NPC1L1-201ENST00000289547 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.27
NPC1L1-201ENST00000289547 POLR3GO15318 223 aaPredicted RBP13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 PTPN14Q15678 1187 aa13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 KLHL40Q2TBA0 621 aa13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 CCDC191Q8NCU4 936 aa13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 DCCP43146 1447 aa13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 BLMP54132 1417 aaPredicted RBP13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 LDHAL6AQ6ZMR3 332 aa13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 DLC1Q96QB1 1528 aa13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 EIF3JO75822 258 aaKnown RBP13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 EYA3Q99504 573 aa13.33□□□□□ -0.28
NPC1L1-201ENST00000289547 ADAMTS13Q76LX8 1427 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 TNNT1P13805 278 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 CDR1P51861 262 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 RARSP54136 660 aaKnown RBP13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 FKBP4Q02790 459 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 OLFM4Q6UX06 510 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 GTPBP4Q9BZE4 634 aaKnown RBP13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 FRMPD1Q5SYB0 1578 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 KIAA0754O94854 1291 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 KRT85P78386 507 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 SMAP1Q8IYB5 467 aaPredicted RBP13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 KIF1BPQ96EK5 621 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 CCDC94Q9BW85 323 aaPredicted RBP13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 F6X3S4 739 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 HDAC9Q9UKV0 1011 aa13.32□□□□□ -0.28
NPC1L1-201ENST00000289547 IKQ13123 557 aaPredicted RBP13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 NUP62CLQ9H1M0 184 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 ERLIN1O75477 346 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 TRIM29Q14134 588 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 GPATCH11Q8N954 259 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 MYO1BO43795 1136 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 DZIP1Q86YF9 867 aaKnown RBP13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 DDX21Q9NR30 783 aaKnown RBP eCLIP13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 ZKSCAN5Q9Y2L8 839 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 KAT6BQ8WYB5 2073 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 TMEM57Q8N5G2 664 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 ABCF2Q9UG63 623 aa13.31□□□□□ -0.28
NPC1L1-201ENST00000289547 H0YIN7 160 aa13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms