RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 TNS2Q63HR2 1409 aa23.36■■□□□ 1.33
BRAF-201ENST00000288602 FOXO4P98177 505 aa23.36■■□□□ 1.33
BRAF-201ENST00000288602 DNAJC10Q8IXB1 793 aa23.36■■□□□ 1.33
BRAF-201ENST00000288602 EDC3Q96F86 508 aaKnown RBP23.36■■□□□ 1.33
BRAF-201ENST00000288602 CCDC9Q9Y3X0 531 aaKnown RBP23.36■■□□□ 1.33
BRAF-201ENST00000288602 NDUFB9Q9Y6M9 179 aa23.36■■□□□ 1.33
BRAF-201ENST00000288602 H7C1W4 665 aa23.35■■□□□ 1.33
BRAF-201ENST00000288602 FAM227BQ96M60 508 aa23.35■■□□□ 1.33
BRAF-201ENST00000288602 SNX14Q9Y5W7 946 aa23.35■■□□□ 1.33
BRAF-201ENST00000288602 ATG3Q9NT62 314 aa23.34■■□□□ 1.33
BRAF-201ENST00000288602 ROBO1Q9Y6N7 1651 aa23.34■■□□□ 1.33
BRAF-201ENST00000288602 TNNI3KQ59H18 835 aa23.34■■□□□ 1.33
BRAF-201ENST00000288602 SYTL4Q96C24 671 aaPredicted RBP23.34■■□□□ 1.33
BRAF-201ENST00000288602 DBNLQ9UJU6 430 aaKnown RBP23.34■■□□□ 1.33
BRAF-201ENST00000288602 FPGT-TNNI3KV9GXZ4 949 aa23.34■■□□□ 1.33
BRAF-201ENST00000288602 LARP6Q9BRS8 491 aaKnown RBP23.33■■□□□ 1.32
BRAF-201ENST00000288602 NUP188Q5SRE5 1749 aa23.33■■□□□ 1.32
BRAF-201ENST00000288602 RUFY2Q8WXA3 655 aa23.32■■□□□ 1.32
BRAF-201ENST00000288602 CPA1P15085 419 aa23.32■■□□□ 1.32
BRAF-201ENST00000288602 NMIQ13287 307 aaPredicted RBP23.32■■□□□ 1.32
BRAF-201ENST00000288602 FOXD4L5Q5VV16 416 aaPredicted RBP23.32■■□□□ 1.32
BRAF-201ENST00000288602 FOXD4L4Q8WXT5 416 aaPredicted RBP23.32■■□□□ 1.32
BRAF-201ENST00000288602 FSD1Q9BTV5 496 aa23.32■■□□□ 1.32
BRAF-201ENST00000288602 BRPF3Q9ULD4 1205 aa23.32■■□□□ 1.32
BRAF-201ENST00000288602 BAG4O95429 457 aaKnown RBP23.31■■□□□ 1.32
BRAF-201ENST00000288602 ZNF594Q96JF6 807 aaPredicted RBP23.31■■□□□ 1.32
BRAF-201ENST00000288602 CWC22Q9HCG8 908 aaKnown RBP23.31■■□□□ 1.32
BRAF-201ENST00000288602 ADAMTS2O95450 1211 aa23.31■■□□□ 1.32
BRAF-201ENST00000288602 NUCB2P80303 420 aa23.31■■□□□ 1.32
BRAF-201ENST00000288602 IL17RAQ96F46 866 aa23.31■■□□□ 1.32
BRAF-201ENST00000288602 DBNDD2Q9BQY9 259 aa23.31■■□□□ 1.32
BRAF-201ENST00000288602 EPB41L2O43491 1005 aaKnown RBP23.3■■□□□ 1.32
BRAF-201ENST00000288602 CYP2E1P05181 493 aaPredicted RBP23.3■■□□□ 1.32
BRAF-201ENST00000288602 CHAMP1Q96JM3 812 aa23.3■■□□□ 1.32
BRAF-201ENST00000288602 ZDHHC9Q9Y397 364 aa23.3■■□□□ 1.32
BRAF-201ENST00000288602 COL15A1P39059 1388 aa23.3■■□□□ 1.32
BRAF-201ENST00000288602 MCM2P49736 904 aa23.3■■□□□ 1.32
BRAF-201ENST00000288602 PRPF40BQ6NWY9 871 aaKnown RBP23.3■■□□□ 1.32
BRAF-201ENST00000288602 CCDC191Q8NCU4 936 aa23.3■■□□□ 1.32
BRAF-201ENST00000288602 A0A0D9SFI3 127 aa23.29■■□□□ 1.32
BRAF-201ENST00000288602 TJP1Q07157 1748 aa23.28■■□□□ 1.32
BRAF-201ENST00000288602 CHGBP05060 677 aa23.28■■□□□ 1.32
BRAF-201ENST00000288602 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
BRAF-201ENST00000288602 SLC4A9Q96Q91 983 aa23.28■■□□□ 1.32
BRAF-201ENST00000288602 ITGB4P16144 1822 aa23.28■■□□□ 1.32
BRAF-201ENST00000288602 EXOC5O00471 708 aa23.27■■□□□ 1.32
BRAF-201ENST00000288602 ADCK5Q3MIX3 580 aa23.27■■□□□ 1.32
BRAF-201ENST00000288602 MCTP1Q6DN14 999 aa23.27■■□□□ 1.32
BRAF-201ENST00000288602 LRRC24Q50LG9 513 aa23.27■■□□□ 1.32
BRAF-201ENST00000288602 ATG9AQ7Z3C6 839 aa23.27■■□□□ 1.32
BRAF-201ENST00000288602 DNAJC2Q99543 621 aaKnown RBP23.27■■□□□ 1.32
BRAF-201ENST00000288602 DISP2A7MBM2 1401 aa23.27■■□□□ 1.32
BRAF-201ENST00000288602 COL14A1Q05707 1796 aaKnown RBP23.26■■□□□ 1.31
BRAF-201ENST00000288602 CASTP20810 708 aaKnown RBP23.26■■□□□ 1.31
BRAF-201ENST00000288602 A0A0G2JS52 829 aa23.26■■□□□ 1.31
BRAF-201ENST00000288602 TCIRG1Q13488 830 aa23.26■■□□□ 1.31
BRAF-201ENST00000288602 CUL4AQ13619 759 aa23.26■■□□□ 1.31
BRAF-201ENST00000288602 NEUROD6Q96NK8 337 aa23.26■■□□□ 1.31
BRAF-201ENST00000288602 IL27Q8NEV9 243 aa23.25■■□□□ 1.31
BRAF-201ENST00000288602 FAM89AQ96GI7 184 aa23.25■■□□□ 1.31
BRAF-201ENST00000288602 CCDC171Q6TFL3 1326 aa23.25■■□□□ 1.31
BRAF-201ENST00000288602 COL16A1Q07092 1604 aaPredicted RBP23.25■■□□□ 1.31
BRAF-201ENST00000288602 AK2P54819 239 aa23.25■■□□□ 1.31
BRAF-201ENST00000288602 TIMM10P62072 90 aa23.25■■□□□ 1.31
BRAF-201ENST00000288602 ISCA1Q9BUE6 129 aa23.25■■□□□ 1.31
BRAF-201ENST00000288602 STARD3NLO95772 234 aa23.24■■□□□ 1.31
BRAF-201ENST00000288602 ATP5JP18859 108 aa23.24■■□□□ 1.31
BRAF-201ENST00000288602 CLEC17AQ6ZS10 378 aa23.24■■□□□ 1.31
BRAF-201ENST00000288602 ZNF589Q86UQ0 364 aaPredicted RBP23.24■■□□□ 1.31
BRAF-201ENST00000288602 SYNE4Q8N205 404 aa23.24■■□□□ 1.31
BRAF-201ENST00000288602 PUS3Q9BZE2 481 aaKnown RBP23.24■■□□□ 1.31
BRAF-201ENST00000288602 HLFQ16534 295 aa23.24■■□□□ 1.31
BRAF-201ENST00000288602 VSIG10Q8N0Z9 540 aa23.24■■□□□ 1.31
BRAF-201ENST00000288602 TTC14Q96N46 770 aa23.24■■□□□ 1.31
BRAF-201ENST00000288602 RBM8AQ9Y5S9 174 aaKnown RBP23.24■■□□□ 1.31
BRAF-201ENST00000288602 KCNJ4P48050 445 aa23.23■■□□□ 1.31
BRAF-201ENST00000288602 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
BRAF-201ENST00000288602 KIF6Q6ZMV9 814 aa23.23■■□□□ 1.31
BRAF-201ENST00000288602 JAKMIP1Q96N16 626 aaKnown RBP23.23■■□□□ 1.31
BRAF-201ENST00000288602 DTNBO60941 627 aa23.23■■□□□ 1.31
BRAF-201ENST00000288602 GPTP24298 496 aa23.23■■□□□ 1.31
BRAF-201ENST00000288602 COL9A3Q14050 684 aaPredicted RBP23.23■■□□□ 1.31
BRAF-201ENST00000288602 NECTIN1Q15223 517 aa23.23■■□□□ 1.31
BRAF-201ENST00000288602 TEX13AQ9BXU3 409 aaPredicted RBP23.23■■□□□ 1.31
BRAF-201ENST00000288602 BCL9O00512 1426 aa23.23■■□□□ 1.31
BRAF-201ENST00000288602 GOLGA6L22H0YM25 854 aa23.22■■□□□ 1.31
BRAF-201ENST00000288602 HIP1O00291 1037 aa23.22■■□□□ 1.31
BRAF-201ENST00000288602 NUTM2BA6NNL0 878 aaPredicted RBP23.22■■□□□ 1.31
BRAF-201ENST00000288602 NUTM2EB1AL46 878 aaPredicted RBP23.22■■□□□ 1.31
BRAF-201ENST00000288602 DDX46Q7L014 1031 aaKnown RBP23.22■■□□□ 1.31
BRAF-201ENST00000288602 NUTM2AQ8IVF1 878 aaPredicted RBP23.22■■□□□ 1.31
BRAF-201ENST00000288602 RUFY3Q7L099 469 aa23.21■■□□□ 1.31
BRAF-201ENST00000288602 CREB3L3Q68CJ9 461 aa23.21■■□□□ 1.31
BRAF-201ENST00000288602 MAP4K1Q92918 833 aa23.21■■□□□ 1.31
BRAF-201ENST00000288602 ZBTB1Q9Y2K1 713 aa23.21■■□□□ 1.31
BRAF-201ENST00000288602 CYP19A1P11511 503 aaPredicted RBP23.2■■□□□ 1.3
BRAF-201ENST00000288602 GOLGA6L3A6NEY3 463 aa23.2■■□□□ 1.3
BRAF-201ENST00000288602 INTS4Q96HW7 963 aaKnown RBP23.2■■□□□ 1.3
BRAF-201ENST00000288602 SEC62Q99442 399 aaKnown RBP23.2■■□□□ 1.3
BRAF-201ENST00000288602 TAF6LQ9Y6J9 622 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms