RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 SLC4A2P04920 1241 aa32.28■■■□□ 2.76
PDF-201ENST00000288022 ATP5J2-PTCD1G3V325 749 aa32.27■■■□□ 2.76
PDF-201ENST00000288022 CNKSR1Q969H4 720 aa32.27■■■□□ 2.76
PDF-201ENST00000288022 ZNF428Q96B54 188 aa32.27■■■□□ 2.76
PDF-201ENST00000288022 UTRNP46939 3433 aa32.26■■■□□ 2.76
PDF-201ENST00000288022 E9PSI1 815 aa32.26■■■□□ 2.75
PDF-201ENST00000288022 NPR1P16066 1061 aa32.26■■■□□ 2.75
PDF-201ENST00000288022 TRMT112Q9UI30 125 aaKnown RBP32.26■■■□□ 2.75
PDF-201ENST00000288022 KLRG2A4D1S0 409 aaPredicted RBP32.25■■■□□ 2.75
PDF-201ENST00000288022 ZNF219Q9P2Y4 722 aaPredicted RBP32.25■■■□□ 2.75
PDF-201ENST00000288022 CACNA1SQ13698 1873 aa32.25■■■□□ 2.75
PDF-201ENST00000288022 ISCA1Q9BUE6 129 aa32.24■■■□□ 2.75
PDF-201ENST00000288022 RNF123Q5XPI4 1314 aa32.24■■■□□ 2.75
PDF-201ENST00000288022 MYD88Q99836 296 aa32.23■■■□□ 2.75
PDF-201ENST00000288022 RIC1Q4ADV7 1423 aa32.23■■■□□ 2.75
PDF-201ENST00000288022 PRPF40BQ6NWY9 871 aaKnown RBP32.22■■■□□ 2.75
PDF-201ENST00000288022 G2E3Q7L622 706 aa32.22■■■□□ 2.75
PDF-201ENST00000288022 MAP3K2Q9Y2U5 619 aa32.22■■■□□ 2.75
PDF-201ENST00000288022 SLFN5Q08AF3 891 aa32.21■■■□□ 2.75
PDF-201ENST00000288022 KSR2Q6VAB6 950 aa32.21■■■□□ 2.75
PDF-201ENST00000288022 RPGRQ92834 1020 aaKnown RBP32.21■■■□□ 2.75
PDF-201ENST00000288022 SH3TC1Q8TE82 1336 aa32.21■■■□□ 2.75
PDF-201ENST00000288022 C21orf2O43822 256 aa32.2■■■□□ 2.75
PDF-201ENST00000288022 NLRP3Q96P20 1036 aa32.2■■■□□ 2.75
PDF-201ENST00000288022 PI4KAP2A4QPH2 592 aa32.19■■■□□ 2.74
PDF-201ENST00000288022 CRY2Q49AN0 593 aa32.19■■■□□ 2.74
PDF-201ENST00000288022 PI4KAP1Q8N8J0 262 aa32.19■■■□□ 2.74
PDF-201ENST00000288022 CDCA7LQ96GN5 454 aa32.19■■■□□ 2.74
PDF-201ENST00000288022 METTL22Q9BUU2 404 aaPredicted RBP32.19■■■□□ 2.74
PDF-201ENST00000288022 SLX4Q8IY92 1834 aa32.19■■■□□ 2.74
PDF-201ENST00000288022 FLIIQ13045 1269 aa32.18■■■□□ 2.74
PDF-201ENST00000288022 TRIM28Q13263 835 aaKnown RBP32.18■■■□□ 2.74
PDF-201ENST00000288022 SLC10A5Q5PT55 438 aa32.18■■■□□ 2.74
PDF-201ENST00000288022 SYNE4Q8N205 404 aa32.18■■■□□ 2.74
PDF-201ENST00000288022 HCLS1P14317 486 aaPredicted RBP32.17■■■□□ 2.74
PDF-201ENST00000288022 ALDH1B1P30837 517 aa32.17■■■□□ 2.74
PDF-201ENST00000288022 ADCY9O60503 1353 aa32.17■■■□□ 2.74
PDF-201ENST00000288022 FKBP5Q13451 457 aaPredicted RBP32.16■■■□□ 2.74
PDF-201ENST00000288022 C3orf67Q6ZVT6 689 aa32.16■■■□□ 2.74
PDF-201ENST00000288022 ZNF784Q8NCA9 323 aaPredicted RBP32.16■■■□□ 2.74
PDF-201ENST00000288022 FAM89AQ96GI7 184 aa32.16■■■□□ 2.74
PDF-201ENST00000288022 CACNA1FO60840 1977 aa32.16■■■□□ 2.74
PDF-201ENST00000288022 RASSF7Q02833 373 aa32.15■■■□□ 2.74
PDF-201ENST00000288022 NEXNQ0ZGT2 675 aa32.15■■■□□ 2.74
PDF-201ENST00000288022 RTL5Q5HYW3 569 aaPredicted RBP32.15■■■□□ 2.74
PDF-201ENST00000288022 RBM17Q96I25 401 aaKnown RBP32.14■■■□□ 2.74
PDF-201ENST00000288022 C9orf131Q5VYM1 1079 aa32.13■■■□□ 2.73
PDF-201ENST00000288022 CCDC191Q8NCU4 936 aa32.13■■■□□ 2.73
PDF-201ENST00000288022 CWC25Q9NXE8 425 aaPredicted RBP32.13■■■□□ 2.73
PDF-201ENST00000288022 SOGA3Q5TF21 947 aa32.12■■■□□ 2.73
PDF-201ENST00000288022 HOXA10P31260 410 aaPredicted RBP32.11■■■□□ 2.73
PDF-201ENST00000288022 HNRNPUQ00839 825 aaKnown RBP eCLIP32.11■■■□□ 2.73
PDF-201ENST00000288022 RNF181Q9P0P0 153 aa32.11■■■□□ 2.73
PDF-201ENST00000288022 LAMB2P55268 1798 aa32.11■■■□□ 2.73
PDF-201ENST00000288022 DDX60Q8IY21 1712 aaKnown RBP32.09■■■□□ 2.73
PDF-201ENST00000288022 NFKBIEO00221 500 aa32.09■■■□□ 2.73
PDF-201ENST00000288022 ZBTB38Q8NAP3 1195 aaPredicted RBP32.09■■■□□ 2.73
PDF-201ENST00000288022 CRAMP1Q96RY5 1269 aa32.09■■■□□ 2.73
PDF-201ENST00000288022 CCDC93Q567U6 631 aa32.08■■■□□ 2.73
PDF-201ENST00000288022 DNAAF4Q8WXU2 420 aa32.08■■■□□ 2.73
PDF-201ENST00000288022 IRS4O14654 1257 aaPredicted RBP32.07■■■□□ 2.72
PDF-201ENST00000288022 IGKV5-2P06315 115 aa32.07■■■□□ 2.72
PDF-201ENST00000288022 TRMT2AQ8IZ69 625 aaKnown RBP32.07■■■□□ 2.72
PDF-201ENST00000288022 C7orf43Q8WVR3 580 aa32.07■■■□□ 2.72
PDF-201ENST00000288022 SBF1O95248 1867 aa32.06■■■□□ 2.72
PDF-201ENST00000288022 FER1L6Q2WGJ9 1857 aa32.06■■■□□ 2.72
PDF-201ENST00000288022 PCCAP05165 728 aaPredicted RBP32.06■■■□□ 2.72
PDF-201ENST00000288022 LMNB1P20700 586 aa32.06■■■□□ 2.72
PDF-201ENST00000288022 CWF19L2Q2TBE0 894 aaKnown RBP32.06■■■□□ 2.72
PDF-201ENST00000288022 OLFM4Q6UX06 510 aa32.05■■■□□ 2.72
PDF-201ENST00000288022 DDX46Q7L014 1031 aaKnown RBP32.05■■■□□ 2.72
PDF-201ENST00000288022 ZNF526Q8TF50 670 aaPredicted RBP32.05■■■□□ 2.72
PDF-201ENST00000288022 JARID2Q92833 1246 aaPredicted RBP32.05■■■□□ 2.72
PDF-201ENST00000288022 TAOK3Q9H2K8 898 aa32.05■■■□□ 2.72
PDF-201ENST00000288022 NEURL1BA8MQ27 555 aa32.04■■■□□ 2.72
PDF-201ENST00000288022 PPEF1O14829 653 aaPredicted RBP32.04■■■□□ 2.72
PDF-201ENST00000288022 HSP90B1P14625 803 aaKnown RBP32.04■■■□□ 2.72
PDF-201ENST00000288022 ABCC4O15439 1325 aa32.03■■■□□ 2.72
PDF-201ENST00000288022 F6X3S4 739 aa32.02■■■□□ 2.72
PDF-201ENST00000288022 LTBP3Q9NS15 1303 aa32.01■■■□□ 2.72
PDF-201ENST00000288022 PRELPP51888 382 aa32.01■■■□□ 2.71
PDF-201ENST00000288022 RTKN2Q8IZC4 609 aa32.01■■■□□ 2.71
PDF-201ENST00000288022 CCDC88AQ3V6T2 1871 aa32■■■□□ 2.71
PDF-201ENST00000288022 MRPL50Q8N5N7 158 aaKnown RBP32■■■□□ 2.71
PDF-201ENST00000288022 LINS1Q8NG48 757 aa32■■■□□ 2.71
PDF-201ENST00000288022 SSH1Q8WYL5 1049 aa32■■■□□ 2.71
PDF-201ENST00000288022 TMX4Q9H1E5 349 aaPredicted RBP32■■■□□ 2.71
PDF-201ENST00000288022 SF3B3Q15393 1217 aaKnown RBP31.99■■■□□ 2.71
PDF-201ENST00000288022 BCL2L13Q9BXK5 485 aa31.99■■■□□ 2.71
PDF-201ENST00000288022 GPBP1L1Q9HC44 474 aaPredicted RBP31.99■■■□□ 2.71
PDF-201ENST00000288022 CC2D2BQ6DHV5 1058 aa31.98■■■□□ 2.71
PDF-201ENST00000288022 PDE8AO60658 829 aa31.97■■■□□ 2.71
PDF-201ENST00000288022 BBOX1O75936 387 aa31.97■■■□□ 2.71
PDF-201ENST00000288022 FKBP4Q02790 459 aaKnown RBP eCLIP31.97■■■□□ 2.71
PDF-201ENST00000288022 GRAPQ13588 217 aa31.97■■■□□ 2.71
PDF-201ENST00000288022 GCKRQ14397 625 aa31.97■■■□□ 2.71
PDF-201ENST00000288022 GRAPLQ8TC17 118 aaPredicted RBP31.97■■■□□ 2.71
PDF-201ENST00000288022 CDHR2Q9BYE9 1310 aa31.97■■■□□ 2.71
PDF-201ENST00000288022 CT47B1P0C2W7 299 aaPredicted RBP31.96■■■□□ 2.71
PDF-201ENST00000288022 UBE3BQ7Z3V4 1068 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms