RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 KSR2Q6VAB6 950 aa15.8■□□□□ 0.12
SLC28A1-201ENST00000286749 PXDNQ92626 1479 aa15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 PRAMEF22A3QJZ6 481 aa15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 LARP1BQ659C4 914 aaKnown RBP15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 FERMT3Q86UX7 667 aa15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 THEMISQ8N1K5 641 aaPredicted RBP15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 JARID2Q92833 1246 aaPredicted RBP15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 MTERF4Q7Z6M4 381 aaKnown RBP15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 CCDC8Q9H0W5 538 aaPredicted RBP15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 CHMP3Q9Y3E7 222 aa15.79■□□□□ 0.12
SLC28A1-201ENST00000286749 SLC27A2O14975 620 aa15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 SASH1O94885 1247 aa15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 PLEKHO1Q53GL0 409 aaPredicted RBP15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 CDC37L1Q7L3B6 337 aa15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 TTC6Q86TZ1 520 aa15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 MAP4K1Q92918 833 aa15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 EAF2Q96CJ1 260 aaPredicted RBP15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 SUCLG2Q96I99 432 aa15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 TCEANC2Q96MN5 208 aa15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 RNMTO43148 476 aaKnown RBP15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 GIGYF1O75420 1035 aaPredicted RBP15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 FAM173BQ6P4H8 233 aa15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 TLR7Q9NYK1 1049 aaKnown RBP15.78■□□□□ 0.12
SLC28A1-201ENST00000286749 A0A0D9SFI3 127 aa15.77■□□□□ 0.12
SLC28A1-201ENST00000286749 CCDC192P0DO97 292 aa15.77■□□□□ 0.12
SLC28A1-201ENST00000286749 KRT85P78386 507 aa15.77■□□□□ 0.12
SLC28A1-201ENST00000286749 TSC1Q92574 1164 aa15.77■□□□□ 0.12
SLC28A1-201ENST00000286749 PRIMPOLQ96LW4 560 aa15.77■□□□□ 0.12
SLC28A1-201ENST00000286749 SPTLC3Q9NUV7 552 aa15.77■□□□□ 0.12
SLC28A1-201ENST00000286749 KAZALD1Q96I82 304 aa15.77■□□□□ 0.11
SLC28A1-201ENST00000286749 BICC1Q9H694 974 aaKnown RBP15.77■□□□□ 0.11
SLC28A1-201ENST00000286749 HDAC5Q9UQL6 1122 aa15.77■□□□□ 0.11
SLC28A1-201ENST00000286749 GRM8O00222 908 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 HIP1O00291 1037 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 PSMA5P28066 241 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 G3BP1Q13283 466 aaKnown RBP eCLIP15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 C1orf141Q5JVX7 400 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 KLHL34Q8N239 644 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 SPC24Q8NBT2 197 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 SIL1Q9H173 461 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 TAF6LQ9Y6J9 622 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 LIG1P18858 919 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 FSD1Q9BTV5 496 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 BOLA2Q9H3K6 86 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 KCNF1Q9H3M0 494 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 FER1L4A9Z1Z3 1794 aa15.76■□□□□ 0.11
SLC28A1-201ENST00000286749 HMGN5P82970 282 aaKnown RBP15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 CAMK4Q16566 473 aa15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 BLOC1S2Q6QNY1 142 aa15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 RBM33Q96EV2 1170 aaKnown RBP15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 NUP62CLQ9H1M0 184 aa15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 PYCARDQ9ULZ3 195 aa15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 ADGRL3Q9HAR2 1447 aa15.75■□□□□ 0.11
SLC28A1-201ENST00000286749 MAP3K11Q16584 847 aa15.74■□□□□ 0.11
SLC28A1-201ENST00000286749 NCAPD2Q15021 1401 aa15.74■□□□□ 0.11
SLC28A1-201ENST00000286749 PHRF1Q9P1Y6 1649 aaKnown RBP15.74■□□□□ 0.11
SLC28A1-201ENST00000286749 SIPA1L3O60292 1781 aaPredicted RBP15.74■□□□□ 0.11
SLC28A1-201ENST00000286749 PDCP20941 246 aa15.74■□□□□ 0.11
SLC28A1-201ENST00000286749 AMOTQ4VCS5 1084 aa15.74■□□□□ 0.11
SLC28A1-201ENST00000286749 SNRKQ9NRH2 765 aa15.74■□□□□ 0.11
SLC28A1-201ENST00000286749 HEG1Q9ULI3 1381 aa15.74■□□□□ 0.11
SLC28A1-201ENST00000286749 RPS6KB1P23443 525 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 PSME1Q06323 249 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 RNF20Q5VTR2 975 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 KCNH5Q8NCM2 988 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 KLHDC4Q8TBB5 520 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 KIAA1524Q8TCG1 905 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 ELP1O95163 1332 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 MED23Q9ULK4 1368 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 TYRO3Q06418 890 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 STK3Q13188 491 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 TOB2Q14106 344 aaPredicted RBP15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 FAM200AQ8TCP9 573 aa15.73■□□□□ 0.11
SLC28A1-201ENST00000286749 UTYO14607 1347 aa15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 FAM177BA6PVY3 158 aa15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 GTF2F1P35269 517 aaKnown RBP eCLIP15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 ANKRD1Q15327 319 aa15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 LARP1Q6PKG0 1096 aaKnown RBP15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 ZNF589Q86UQ0 364 aaPredicted RBP15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 CKAP2LQ8IYA6 745 aa15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 LUZP1Q86V48 1076 aa15.72■□□□□ 0.11
SLC28A1-201ENST00000286749 DDX58O95786 925 aaKnown RBP15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 TPM3P06753 285 aa15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 ESCO1Q5FWF5 840 aa15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 SPATA32Q96LK8 384 aa15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 DACT1Q9NYF0 836 aa15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 OVOS2A0A0G2JMS6 1433 aa15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 GOLGA6L6A8MZA4 724 aa15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 PDIA4P13667 645 aaKnown RBP15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 EDC3Q96F86 508 aaKnown RBP15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 TNMDQ9H2S6 317 aa15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.11
SLC28A1-201ENST00000286749 GOLGA6L4A6NEF3 574 aa15.7■□□□□ 0.1
SLC28A1-201ENST00000286749 IGKV5-2P06315 115 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms