RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
LPCAT1-201ENST00000283415 RHPN1Q8TCX5 695 aa16.48■□□□□ 0.23
LPCAT1-201ENST00000283415 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
LPCAT1-201ENST00000283415 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
LPCAT1-201ENST00000283415 RAB11FIP3O75154 756 aa16.48■□□□□ 0.23
LPCAT1-201ENST00000283415 BRD1O95696 1058 aa16.48■□□□□ 0.23
LPCAT1-201ENST00000283415 UQCRHP07919 91 aa16.48■□□□□ 0.23
LPCAT1-201ENST00000283415 SNRKQ9NRH2 765 aa16.48■□□□□ 0.23
LPCAT1-201ENST00000283415 JCADQ9P266 1359 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 APPP05067 770 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 HSPA4P34932 840 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 CHMP4CQ96CF2 233 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 TCHHQ07283 1943 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 ANKRD24Q8TF21 1146 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 SHANK3Q9BYB0 1731 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 TJP1Q07157 1748 aa16.47■□□□□ 0.23
LPCAT1-201ENST00000283415 WASHC4Q2M389 1173 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 LRRC2Q9BYS8 371 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 TSPY26PQ9H489 355 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 PDLIM2Q96JY6 352 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 TTC14Q96N46 770 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 USP25Q9UHP3 1055 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 KIF1BPQ96EK5 621 aa16.46■□□□□ 0.23
LPCAT1-201ENST00000283415 DDX60Q8IY21 1712 aaKnown RBP16.46■□□□□ 0.22
LPCAT1-201ENST00000283415 MCM2P49736 904 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 CAMK4Q16566 473 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 RPAP1Q9BWH6 1393 aaPredicted RBP16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 XIRP1Q702N8 1843 aaKnown RBP16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 GNL2Q13823 731 aaKnown RBP16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 UBE3BQ7Z3V4 1068 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 ARHGEF25Q86VW2 580 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 PKNOX2Q96KN3 472 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 AFDNP55196 1824 aaKnown RBP16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 CABP4P57796 275 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 ZBTB3Q9H5J0 574 aa16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 TFIP11Q9UBB9 837 aaKnown RBP16.45■□□□□ 0.22
LPCAT1-201ENST00000283415 PHF14O94880 888 aa16.44■□□□□ 0.22
LPCAT1-201ENST00000283415 HSP90AB4PQ58FF6 505 aa16.44■□□□□ 0.22
LPCAT1-201ENST00000283415 NFATC2IPQ8NCF5 419 aa16.44■□□□□ 0.22
LPCAT1-201ENST00000283415 KRT28Q7Z3Y7 464 aa16.44■□□□□ 0.22
LPCAT1-201ENST00000283415 FKBP4Q02790 459 aaKnown RBP eCLIP16.44■□□□□ 0.22
LPCAT1-201ENST00000283415 LSG1Q9H089 658 aaKnown RBP16.44■□□□□ 0.22
LPCAT1-201ENST00000283415 RBSNQ9H1K0 784 aa16.44■□□□□ 0.22
LPCAT1-201ENST00000283415 PRDM11Q9NQV5 511 aa16.43■□□□□ 0.22
LPCAT1-201ENST00000283415 COL15A1P39059 1388 aa16.43■□□□□ 0.22
LPCAT1-201ENST00000283415 UBE2Q2Q8WVN8 375 aa16.43■□□□□ 0.22
LPCAT1-201ENST00000283415 EDC3Q96F86 508 aaKnown RBP16.43■□□□□ 0.22
LPCAT1-201ENST00000283415 RAD50Q92878 1312 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 GUCY1B3Q02153 619 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 MYH15Q9Y2K3 1946 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 SGSM2O43147 1006 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 GCP02774 474 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 FAM173BQ6P4H8 233 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 TMEM87AQ8NBN3 555 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 HDAC5Q9UQL6 1122 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 KDM6AO15550 1401 aaPredicted RBP16.42■□□□□ 0.22
LPCAT1-201ENST00000283415 HSPA2P54652 639 aa16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 PDIA6Q15084 440 aa16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 LARP1BQ659C4 914 aaKnown RBP16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 KCNH5Q8NCM2 988 aa16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 KAZALD1Q96I82 304 aa16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 NPHP4O75161 1426 aaPredicted RBP16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 MBD3O95983 291 aa16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 SF3A1Q15459 793 aaKnown RBP16.41■□□□□ 0.22
LPCAT1-201ENST00000283415 XAGE3Q8WTP9 111 aa16.4■□□□□ 0.22
LPCAT1-201ENST00000283415 TULP1O00294 542 aaPredicted RBP16.4■□□□□ 0.22
LPCAT1-201ENST00000283415 CCDC39Q9UFE4 941 aa16.4■□□□□ 0.22
LPCAT1-201ENST00000283415 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
LPCAT1-201ENST00000283415 TTC41PQ6P2S7 1318 aa16.4■□□□□ 0.22
LPCAT1-201ENST00000283415 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
LPCAT1-201ENST00000283415 LAMA4Q16363 1823 aa16.4■□□□□ 0.22
LPCAT1-201ENST00000283415 A0A087WZG4 1122 aa16.39■□□□□ 0.21
LPCAT1-201ENST00000283415 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
LPCAT1-201ENST00000283415 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
LPCAT1-201ENST00000283415 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
LPCAT1-201ENST00000283415 C17orf53Q8N3J3 647 aaPredicted RBP16.39■□□□□ 0.21
LPCAT1-201ENST00000283415 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
LPCAT1-201ENST00000283415 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.21
LPCAT1-201ENST00000283415 C1orf167Q5SNV9 1468 aa16.39■□□□□ 0.21
LPCAT1-201ENST00000283415 ABCA3Q99758 1704 aa16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 RRP9O43818 475 aaKnown RBP16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 TSC1Q92574 1164 aa16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 TPM2P07951 284 aa16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 GLRX3O76003 335 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms