RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
VPS26B-201ENST00000281187 HDAC5Q9UQL6 1122 aa16.66■□□□□ 0.26
VPS26B-201ENST00000281187 HDGFP51858 240 aaKnown RBP16.66■□□□□ 0.26
VPS26B-201ENST00000281187 CCDC34Q96HJ3 373 aa16.66■□□□□ 0.26
VPS26B-201ENST00000281187 ST7Q9NRC1 585 aa16.66■□□□□ 0.26
VPS26B-201ENST00000281187 RIC3Q7Z5B4 369 aa16.65■□□□□ 0.26
VPS26B-201ENST00000281187 MYOM1P52179 1685 aa16.65■□□□□ 0.26
VPS26B-201ENST00000281187 POLR3DP05423 398 aaPredicted RBP16.65■□□□□ 0.26
VPS26B-201ENST00000281187 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
VPS26B-201ENST00000281187 LMOD1P29536 600 aaPredicted RBP16.65■□□□□ 0.26
VPS26B-201ENST00000281187 CHPF2Q9P2E5 772 aa16.65■□□□□ 0.26
VPS26B-201ENST00000281187 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
VPS26B-201ENST00000281187 USP27XA6NNY8 438 aa16.64■□□□□ 0.25
VPS26B-201ENST00000281187 HIP1O00291 1037 aa16.64■□□□□ 0.25
VPS26B-201ENST00000281187 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
VPS26B-201ENST00000281187 CLSTN2Q9H4D0 955 aa16.64■□□□□ 0.25
VPS26B-201ENST00000281187 CTNNA3Q9UI47 895 aa16.64■□□□□ 0.25
VPS26B-201ENST00000281187 EVI5LQ96CN4 794 aa16.64■□□□□ 0.25
VPS26B-201ENST00000281187 NEMFO60524 1076 aa16.64■□□□□ 0.25
VPS26B-201ENST00000281187 NDUFB9Q9Y6M9 179 aa16.64■□□□□ 0.25
VPS26B-201ENST00000281187 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
VPS26B-201ENST00000281187 MED14O60244 1454 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 CCDC144BQ3MJ40 725 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 CCDC144CPQ8IYA2 1237 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 KIF24Q5T7B8 1368 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 IFNKQ9P0W0 207 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 ATP2B1P20020 1258 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 FBXO38Q6PIJ6 1188 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 LRRC8AQ8IWT6 810 aa16.63■□□□□ 0.25
VPS26B-201ENST00000281187 SPHKAPQ2M3C7 1700 aa16.62■□□□□ 0.25
VPS26B-201ENST00000281187 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
VPS26B-201ENST00000281187 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
VPS26B-201ENST00000281187 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
VPS26B-201ENST00000281187 RPAP1Q9BWH6 1393 aaPredicted RBP16.62■□□□□ 0.25
VPS26B-201ENST00000281187 MYL6BP14649 208 aa16.62■□□□□ 0.25
VPS26B-201ENST00000281187 GOLGA6L1Q8N7Z2 621 aa16.62■□□□□ 0.25
VPS26B-201ENST00000281187 FTOQ9C0B1 505 aaKnown RBP eCLIP16.62■□□□□ 0.25
VPS26B-201ENST00000281187 KIF2AO00139 706 aaPredicted RBP16.61■□□□□ 0.25
VPS26B-201ENST00000281187 LMAN1P49257 510 aa16.61■□□□□ 0.25
VPS26B-201ENST00000281187 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
VPS26B-201ENST00000281187 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
VPS26B-201ENST00000281187 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
VPS26B-201ENST00000281187 ACEP12821 1306 aa16.61■□□□□ 0.25
VPS26B-201ENST00000281187 Q6ZUG5 572 aa16.61■□□□□ 0.25
VPS26B-201ENST00000281187 A0A1B0GVL5 298 aa16.61■□□□□ 0.25
VPS26B-201ENST00000281187 CWF19L2Q2TBE0 894 aaKnown RBP16.61■□□□□ 0.25
VPS26B-201ENST00000281187 KMT5BQ4FZB7 885 aa16.61■□□□□ 0.25
VPS26B-201ENST00000281187 NEK11Q8NG66 645 aa16.61■□□□□ 0.25
VPS26B-201ENST00000281187 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
VPS26B-201ENST00000281187 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 KLHDC4Q8TBB5 520 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 ANKRD7Q92527 254 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 MAP3K19Q56UN5 1328 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 TERF2Q15554 542 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 C11orf57Q6ZUT1 292 aaPredicted RBP16.6■□□□□ 0.25
VPS26B-201ENST00000281187 PES1O00541 588 aaKnown RBP16.6■□□□□ 0.25
VPS26B-201ENST00000281187 SLC27A2O14975 620 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 GSDMDP57764 484 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 C10orf67Q8IYJ2 551 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 ABTB2Q8N961 1025 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 STAP2Q9UGK3 403 aa16.6■□□□□ 0.25
VPS26B-201ENST00000281187 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
VPS26B-201ENST00000281187 PTPN21Q16825 1174 aa16.59■□□□□ 0.25
VPS26B-201ENST00000281187 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
VPS26B-201ENST00000281187 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.59■□□□□ 0.25
VPS26B-201ENST00000281187 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
VPS26B-201ENST00000281187 CTAGE5O15320 804 aa16.59■□□□□ 0.25
VPS26B-201ENST00000281187 EYA1Q99502 592 aa16.59■□□□□ 0.25
VPS26B-201ENST00000281187 TTC21BQ7Z4L5 1316 aa16.59■□□□□ 0.25
VPS26B-201ENST00000281187 GNG11P61952 73 aa16.58■□□□□ 0.25
VPS26B-201ENST00000281187 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.25
VPS26B-201ENST00000281187 CCDC129Q6ZRS4 1044 aa16.58■□□□□ 0.25
VPS26B-201ENST00000281187 CWC15Q9P013 229 aaKnown RBP16.58■□□□□ 0.25
VPS26B-201ENST00000281187 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
VPS26B-201ENST00000281187 DDX58O95786 925 aaKnown RBP16.58■□□□□ 0.24
VPS26B-201ENST00000281187 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
VPS26B-201ENST00000281187 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.24
VPS26B-201ENST00000281187 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
VPS26B-201ENST00000281187 AK7Q96M32 723 aa16.58■□□□□ 0.24
VPS26B-201ENST00000281187 KIF1BO60333 1816 aa16.58■□□□□ 0.24
VPS26B-201ENST00000281187 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.24
VPS26B-201ENST00000281187 NCOA5Q9HCD5 579 aaKnown RBP16.58■□□□□ 0.24
VPS26B-201ENST00000281187 SSH2Q76I76 1423 aa16.58■□□□□ 0.24
VPS26B-201ENST00000281187 KRT32Q14532 448 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 HSP90B2PQ58FF3 399 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 TTC14Q96N46 770 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 MCM6Q14566 821 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 OTUD7BQ6GQQ9 843 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 SSH3Q8TE77 659 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 ZSWIM6Q9HCJ5 1215 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 SHPRHQ149N8 1683 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 QRICH2Q9H0J4 1663 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 TULP4Q9NRJ4 1543 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
VPS26B-201ENST00000281187 CERS3Q8IU89 383 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 CARD6Q9BX69 1037 aa16.57■□□□□ 0.24
VPS26B-201ENST00000281187 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms