RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CEMIPQ8WUJ3 1361 aa32.72■■■□□ 2.83
CBX4-201ENST00000269397 BTBD11A6QL63 1104 aa32.72■■■□□ 2.83
CBX4-201ENST00000269397 EVI5LQ96CN4 794 aa32.72■■■□□ 2.83
CBX4-201ENST00000269397 NUP62CLQ9H1M0 184 aa32.72■■■□□ 2.83
CBX4-201ENST00000269397 DIP2AQ14689 1571 aa32.72■■■□□ 2.83
CBX4-201ENST00000269397 STK3Q13188 491 aa32.72■■■□□ 2.83
CBX4-201ENST00000269397 MRVI1Q9Y6F6 885 aa32.72■■■□□ 2.83
CBX4-201ENST00000269397 TEFQ10587 303 aa32.71■■■□□ 2.83
CBX4-201ENST00000269397 MAP3K11Q16584 847 aa32.71■■■□□ 2.83
CBX4-201ENST00000269397 SMAP1Q8IYB5 467 aaPredicted RBP32.71■■■□□ 2.83
CBX4-201ENST00000269397 CBX1P83916 185 aa32.71■■■□□ 2.83
CBX4-201ENST00000269397 TYRO3Q06418 890 aa32.71■■■□□ 2.83
CBX4-201ENST00000269397 KCNB2Q92953 911 aa32.71■■■□□ 2.83
CBX4-201ENST00000269397 CRYBG1Q9Y4K1 1723 aa32.7■■■□□ 2.83
CBX4-201ENST00000269397 RIOK3O14730 519 aaKnown RBP32.7■■■□□ 2.83
CBX4-201ENST00000269397 DACT1Q9NYF0 836 aa32.7■■■□□ 2.83
CBX4-201ENST00000269397 TLR7Q9NYK1 1049 aaKnown RBP32.7■■■□□ 2.83
CBX4-201ENST00000269397 SLC27A2O14975 620 aa32.7■■■□□ 2.82
CBX4-201ENST00000269397 FAM200AQ8TCP9 573 aa32.7■■■□□ 2.82
CBX4-201ENST00000269397 PRAMEF22A3QJZ6 481 aa32.69■■■□□ 2.82
CBX4-201ENST00000269397 PPP4R3BQ5MIZ7 849 aa32.69■■■□□ 2.82
CBX4-201ENST00000269397 A0A0D9SFI3 127 aa32.69■■■□□ 2.82
CBX4-201ENST00000269397 EAF2Q96CJ1 260 aaPredicted RBP32.69■■■□□ 2.82
CBX4-201ENST00000269397 MTX1Q13505 466 aa32.68■■■□□ 2.82
CBX4-201ENST00000269397 MAP4K1Q92918 833 aa32.68■■■□□ 2.82
CBX4-201ENST00000269397 SIL1Q9H173 461 aa32.68■■■□□ 2.82
CBX4-201ENST00000269397 BOLA2Q9H3K6 86 aa32.68■■■□□ 2.82
CBX4-201ENST00000269397 LARP1Q6PKG0 1096 aaKnown RBP32.67■■■□□ 2.82
CBX4-201ENST00000269397 GOLGA6L6A8MZA4 724 aa32.66■■■□□ 2.82
CBX4-201ENST00000269397 SASH1O94885 1247 aa32.66■■■□□ 2.82
CBX4-201ENST00000269397 ANO6Q4KMQ2 910 aa32.66■■■□□ 2.82
CBX4-201ENST00000269397 TNMDQ9H2S6 317 aa32.66■■■□□ 2.82
CBX4-201ENST00000269397 LRMPQ12912 555 aa32.66■■■□□ 2.82
CBX4-201ENST00000269397 LRRC59Q96AG4 307 aaKnown RBP32.66■■■□□ 2.82
CBX4-201ENST00000269397 GOLGA6L4A6NEF3 574 aa32.65■■■□□ 2.82
CBX4-201ENST00000269397 ATP2B3Q16720 1220 aa32.65■■■□□ 2.82
CBX4-201ENST00000269397 NRBP1Q9UHY1 535 aa32.65■■■□□ 2.82
CBX4-201ENST00000269397 ZNF530Q6P9A1 599 aaPredicted RBP32.65■■■□□ 2.82
CBX4-201ENST00000269397 BLOC1S2Q6QNY1 142 aa32.65■■■□□ 2.82
CBX4-201ENST00000269397 DBF4Q9UBU7 674 aaPredicted RBP32.65■■■□□ 2.82
CBX4-201ENST00000269397 CHAF1AQ13111 956 aaPredicted RBP32.64■■■□□ 2.82
CBX4-201ENST00000269397 CCDC186Q7Z3E2 898 aa32.64■■■□□ 2.82
CBX4-201ENST00000269397 DRC7Q8IY82 874 aa32.64■■■□□ 2.82
CBX4-201ENST00000269397 SPATA32Q96LK8 384 aa32.64■■■□□ 2.82
CBX4-201ENST00000269397 HOXB7P09629 217 aa32.64■■■□□ 2.82
CBX4-201ENST00000269397 KLHDC4Q8TBB5 520 aa32.64■■■□□ 2.82
CBX4-201ENST00000269397 FSD1Q9BTV5 496 aa32.64■■■□□ 2.82
CBX4-201ENST00000269397 CBX8Q9HC52 389 aa32.64■■■□□ 2.82
CBX4-201ENST00000269397 SUCLG2Q96I99 432 aa32.64■■■□□ 2.81
CBX4-201ENST00000269397 ERC1Q8IUD2 1116 aa32.63■■■□□ 2.81
CBX4-201ENST00000269397 AIMP1Q12904 312 aaKnown RBP32.63■■■□□ 2.81
CBX4-201ENST00000269397 PSMA5P28066 241 aa32.62■■■□□ 2.81
CBX4-201ENST00000269397 EDC3Q96F86 508 aaKnown RBP32.62■■■□□ 2.81
CBX4-201ENST00000269397 BICC1Q9H694 974 aaKnown RBP32.62■■■□□ 2.81
CBX4-201ENST00000269397 TPM3P06753 285 aa32.62■■■□□ 2.81
CBX4-201ENST00000269397 ZNF589Q86UQ0 364 aaPredicted RBP32.62■■■□□ 2.81
CBX4-201ENST00000269397 ZHX1Q9UKY1 873 aaPredicted RBP32.62■■■□□ 2.81
CBX4-201ENST00000269397 SPDYE4A6NLX3 237 aa32.61■■■□□ 2.81
CBX4-201ENST00000269397 TOB2Q14106 344 aaPredicted RBP32.61■■■□□ 2.81
CBX4-201ENST00000269397 KAZALD1Q96I82 304 aa32.61■■■□□ 2.81
CBX4-201ENST00000269397 G3BP1Q13283 466 aaKnown RBP eCLIP32.61■■■□□ 2.81
CBX4-201ENST00000269397 MARF1Q9Y4F3 1742 aaKnown RBP32.61■■■□□ 2.81
CBX4-201ENST00000269397 KSR2Q6VAB6 950 aa32.6■■■□□ 2.81
CBX4-201ENST00000269397 TBX22Q9Y458 520 aa32.6■■■□□ 2.81
CBX4-201ENST00000269397 PDCP20941 246 aa32.6■■■□□ 2.81
CBX4-201ENST00000269397 NR1I2O75469 434 aa32.59■■■□□ 2.81
CBX4-201ENST00000269397 RPS6KB1P23443 525 aa32.59■■■□□ 2.81
CBX4-201ENST00000269397 LEO1Q8WVC0 666 aaPredicted RBP32.59■■■□□ 2.81
CBX4-201ENST00000269397 TRIM5Q9C035 493 aa32.59■■■□□ 2.81
CBX4-201ENST00000269397 ELP1O95163 1332 aa32.59■■■□□ 2.81
CBX4-201ENST00000269397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP32.58■■■□□ 2.81
CBX4-201ENST00000269397 JAK2O60674 1132 aa32.58■■■□□ 2.81
CBX4-201ENST00000269397 ALDH1L1O75891 902 aa32.58■■■□□ 2.81
CBX4-201ENST00000269397 KCNA6P17658 529 aa32.58■■■□□ 2.81
CBX4-201ENST00000269397 PDCL2Q8N4E4 241 aa32.58■■■□□ 2.81
CBX4-201ENST00000269397 IP6K1Q92551 441 aa32.58■■■□□ 2.81
CBX4-201ENST00000269397 DDX11Q96FC9 970 aa32.58■■■□□ 2.81
CBX4-201ENST00000269397 C16orf45Q96MC5 204 aaPredicted RBP32.58■■■□□ 2.81
CBX4-201ENST00000269397 ZSCAN20P17040 1043 aaPredicted RBP32.57■■■□□ 2.8
CBX4-201ENST00000269397 RBM33Q96EV2 1170 aaKnown RBP32.57■■■□□ 2.8
CBX4-201ENST00000269397 BICD2Q8TD16 824 aa32.57■■■□□ 2.8
CBX4-201ENST00000269397 SCAND2PQ9GZW5 306 aaPredicted RBP32.57■■■□□ 2.8
CBX4-201ENST00000269397 NPHP4O75161 1426 aaPredicted RBP32.56■■■□□ 2.8
CBX4-201ENST00000269397 DNAJC25Q9H1X3 360 aa32.56■■■□□ 2.8
CBX4-201ENST00000269397 GRM8O00222 908 aa32.56■■■□□ 2.8
CBX4-201ENST00000269397 RNF20Q5VTR2 975 aa32.56■■■□□ 2.8
CBX4-201ENST00000269397 PGBD1Q96JS3 809 aa32.56■■■□□ 2.8
CBX4-201ENST00000269397 NDUFB9Q9Y6M9 179 aa32.56■■■□□ 2.8
CBX4-201ENST00000269397 GIGYF1O75420 1035 aaPredicted RBP32.55■■■□□ 2.8
CBX4-201ENST00000269397 HIP1O00291 1037 aa32.54■■■□□ 2.8
CBX4-201ENST00000269397 CHGBP05060 677 aa32.54■■■□□ 2.8
CBX4-201ENST00000269397 BCL11BQ9C0K0 894 aaPredicted RBP32.54■■■□□ 2.8
CBX4-201ENST00000269397 NPHP3Q7Z494 1330 aa32.54■■■□□ 2.8
CBX4-201ENST00000269397 AKAP4Q5JQC9 854 aa32.54■■■□□ 2.8
CBX4-201ENST00000269397 U2AF2P26368 475 aaKnown RBP eCLIP32.54■■■□□ 2.87e-10■■□□□ 13.4
CBX4-201ENST00000269397 ANKRD1Q15327 319 aa32.54■■■□□ 2.8
CBX4-201ENST00000269397 CEBPZQ03701 1054 aaKnown RBP32.53■■■□□ 2.8
CBX4-201ENST00000269397 KLHL34Q8N239 644 aa32.53■■■□□ 2.8
CBX4-201ENST00000269397 CHMP4AQ9BY43 222 aa32.53■■■□□ 2.8
CBX4-201ENST00000269397 CLSTN2Q9H4D0 955 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms