RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
SGCE-201ENST00000265735 FAM177BA6PVY3 158 aa16.15■□□□□ 0.18
SGCE-201ENST00000265735 SRGNP10124 158 aa16.15■□□□□ 0.18
SGCE-201ENST00000265735 PPP1R42Q7Z4L9 355 aa16.15■□□□□ 0.18
SGCE-201ENST00000265735 NLRP10Q86W26 655 aa16.15■□□□□ 0.18
SGCE-201ENST00000265735 ISCA1Q9BUE6 129 aa16.15■□□□□ 0.18
SGCE-201ENST00000265735 STK31Q9BXU1 1019 aa16.15■□□□□ 0.18
SGCE-201ENST00000265735 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.18
SGCE-201ENST00000265735 DALRD3Q5D0E6 543 aaKnown RBP16.14■□□□□ 0.18
SGCE-201ENST00000265735 ABCC12Q96J65 1359 aa16.14■□□□□ 0.17
SGCE-201ENST00000265735 SLC4A2P04920 1241 aa16.14■□□□□ 0.17
SGCE-201ENST00000265735 TRIM28Q13263 835 aaKnown RBP16.14■□□□□ 0.17
SGCE-201ENST00000265735 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
SGCE-201ENST00000265735 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
SGCE-201ENST00000265735 TNRC6CQ9HCJ0 1690 aaKnown RBP16.14■□□□□ 0.17
SGCE-201ENST00000265735 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
SGCE-201ENST00000265735 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
SGCE-201ENST00000265735 G2E3Q7L622 706 aa16.13■□□□□ 0.17
SGCE-201ENST00000265735 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
SGCE-201ENST00000265735 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
SGCE-201ENST00000265735 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
SGCE-201ENST00000265735 DDX58O95786 925 aaKnown RBP16.12■□□□□ 0.17
SGCE-201ENST00000265735 STYK1Q6J9G0 422 aa16.12■□□□□ 0.17
SGCE-201ENST00000265735 CRY2Q49AN0 593 aa16.11■□□□□ 0.17
SGCE-201ENST00000265735 KSR2Q6VAB6 950 aa16.11■□□□□ 0.17
SGCE-201ENST00000265735 MASTLQ96GX5 879 aa16.11■□□□□ 0.17
SGCE-201ENST00000265735 ADCY9O60503 1353 aa16.11■□□□□ 0.17
SGCE-201ENST00000265735 ZNF622Q969S3 477 aaKnown RBP eCLIP16.11■□□□□ 0.17
SGCE-201ENST00000265735 METTL22Q9BUU2 404 aaPredicted RBP16.11■□□□□ 0.17
SGCE-201ENST00000265735 PI4KAP2A4QPH2 592 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 ATP5J2-PTCD1G3V325 749 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 NPR1P16066 1061 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 FLIIQ13045 1269 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 PI4KAP1Q8N8J0 262 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 CNKSR1Q969H4 720 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 MAP3K2Q9Y2U5 619 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 CACNA1SQ13698 1873 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 SLX4Q8IY92 1834 aa16.1■□□□□ 0.17
SGCE-201ENST00000265735 YY1P25490 414 aa16.09■□□□□ 0.17
SGCE-201ENST00000265735 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
SGCE-201ENST00000265735 LAMB2P55268 1798 aa16.09■□□□□ 0.17
SGCE-201ENST00000265735 DDX60Q8IY21 1712 aaKnown RBP16.09■□□□□ 0.17
SGCE-201ENST00000265735 SH3TC1Q8TE82 1336 aa16.09■□□□□ 0.17
SGCE-201ENST00000265735 SYNE4Q8N205 404 aa16.08■□□□□ 0.17
SGCE-201ENST00000265735 MYD88Q99836 296 aa16.08■□□□□ 0.17
SGCE-201ENST00000265735 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.17
SGCE-201ENST00000265735 HOXA10P31260 410 aaPredicted RBP16.08■□□□□ 0.16
SGCE-201ENST00000265735 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
SGCE-201ENST00000265735 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
SGCE-201ENST00000265735 ARHGAP27Q6ZUM4 889 aa16.07■□□□□ 0.16
SGCE-201ENST00000265735 C3orf67Q6ZVT6 689 aa16.07■□□□□ 0.16
SGCE-201ENST00000265735 ZNF428Q96B54 188 aa16.07■□□□□ 0.16
SGCE-201ENST00000265735 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
SGCE-201ENST00000265735 SBF1O95248 1867 aa16.06■□□□□ 0.16
SGCE-201ENST00000265735 FER1L6Q2WGJ9 1857 aa16.06■□□□□ 0.16
SGCE-201ENST00000265735 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
SGCE-201ENST00000265735 ALDH1B1P30837 517 aa16.06■□□□□ 0.16
SGCE-201ENST00000265735 FKBP5Q13451 457 aaPredicted RBP16.06■□□□□ 0.16
SGCE-201ENST00000265735 PRPF40BQ6NWY9 871 aaKnown RBP16.06■□□□□ 0.16
SGCE-201ENST00000265735 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
SGCE-201ENST00000265735 FAM89AQ96GI7 184 aa16.06■□□□□ 0.16
SGCE-201ENST00000265735 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
SGCE-201ENST00000265735 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
SGCE-201ENST00000265735 CT47B1P0C2W7 299 aaPredicted RBP16.05■□□□□ 0.16
SGCE-201ENST00000265735 HCLS1P14317 486 aaPredicted RBP16.05■□□□□ 0.16
SGCE-201ENST00000265735 CWC25Q9NXE8 425 aaPredicted RBP16.05■□□□□ 0.16
SGCE-201ENST00000265735 C21orf2O43822 256 aa16.04■□□□□ 0.16
SGCE-201ENST00000265735 NEXNQ0ZGT2 675 aa16.04■□□□□ 0.16
SGCE-201ENST00000265735 MRPL50Q8N5N7 158 aaKnown RBP16.04■□□□□ 0.16
SGCE-201ENST00000265735 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
SGCE-201ENST00000265735 RPGRQ92834 1020 aaKnown RBP16.04■□□□□ 0.16
SGCE-201ENST00000265735 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
SGCE-201ENST00000265735 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
SGCE-201ENST00000265735 PCCAP05165 728 aaPredicted RBP16.03■□□□□ 0.16
SGCE-201ENST00000265735 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
SGCE-201ENST00000265735 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
SGCE-201ENST00000265735 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
SGCE-201ENST00000265735 PLIN1O60240 522 aa16.02■□□□□ 0.16
SGCE-201ENST00000265735 SF3B3Q15393 1217 aaKnown RBP16.02■□□□□ 0.16
SGCE-201ENST00000265735 CWF19L2Q2TBE0 894 aaKnown RBP16.02■□□□□ 0.16
SGCE-201ENST00000265735 NFKBIEO00221 500 aa16.02■□□□□ 0.15
SGCE-201ENST00000265735 IRS4O14654 1257 aaPredicted RBP16.02■□□□□ 0.15
SGCE-201ENST00000265735 SOGA3Q5TF21 947 aa16.02■□□□□ 0.15
SGCE-201ENST00000265735 LINS1Q8NG48 757 aa16.02■□□□□ 0.15
SGCE-201ENST00000265735 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.15
SGCE-201ENST00000265735 SNED1Q8TER0 1413 aa16.01■□□□□ 0.15
SGCE-201ENST00000265735 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
SGCE-201ENST00000265735 F6X3S4 739 aa16.01■□□□□ 0.15
SGCE-201ENST00000265735 RTL5Q5HYW3 569 aaPredicted RBP16.01■□□□□ 0.15
SGCE-201ENST00000265735 CDHR2Q9BYE9 1310 aa16■□□□□ 0.15
SGCE-201ENST00000265735 LTBP3Q9NS15 1303 aa16■□□□□ 0.15
SGCE-201ENST00000265735 H7C1W4 665 aa16■□□□□ 0.15
SGCE-201ENST00000265735 PRELPP51888 382 aa16■□□□□ 0.15
SGCE-201ENST00000265735 GCKRQ14397 625 aa16■□□□□ 0.15
SGCE-201ENST00000265735 BEND3Q5T5X7 828 aa16■□□□□ 0.15
SGCE-201ENST00000265735 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
SGCE-201ENST00000265735 TAF1P21675 1872 aa16■□□□□ 0.15
SGCE-201ENST00000265735 ABCC4O15439 1325 aa16■□□□□ 0.15
SGCE-201ENST00000265735 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
SGCE-201ENST00000265735 BRPF1P55201 1214 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms