RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 MYCBPQ99417 103 aaPredicted RBP10.37□□□□□ -0.75
VAPB-201ENST00000265619 MIS18AQ9NYP9 233 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 LARGE1O95461 756 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 CPA1P15085 419 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 ZC3H6P61129 1189 aaKnown RBP10.36□□□□□ -0.75
VAPB-201ENST00000265619 ARHGAP29Q52LW3 1261 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 GORABQ5T7V8 394 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 LRRC8AQ8IWT6 810 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 INTS4Q96HW7 963 aaKnown RBP10.36□□□□□ -0.75
VAPB-201ENST00000265619 JRKLQ9Y4A0 524 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 AATKQ6ZMQ8 1374 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 LMOD3Q0VAK6 560 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 USP16Q9Y5T5 823 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 CCDC192P0DO97 292 aa10.36□□□□□ -0.75
VAPB-201ENST00000265619 OAS2P29728 719 aaKnown RBP10.36□□□□□ -0.75
VAPB-201ENST00000265619 MYO3AQ8NEV4 1616 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 FANCGO15287 622 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 VAMP4O75379 141 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 IFIT2P09913 472 aaKnown RBP10.35□□□□□ -0.75
VAPB-201ENST00000265619 MCM10Q7L590 875 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 BANK1Q8NDB2 785 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 CD163L1Q9NR16 1453 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 F13A1P00488 732 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 ATF3P18847 181 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 CCZ1BP86790 482 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 CCZ1P86791 482 aaPredicted RBP10.35□□□□□ -0.75
VAPB-201ENST00000265619 DNAJC25Q9H1X3 360 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 NRXN3Q9Y4C0 1643 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 ABCC4O15439 1325 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 STX6O43752 255 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 SKILP12757 684 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 TICAM2Q86XR7 235 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 TXLNBQ8N3L3 684 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 UBXN6Q9BZV1 441 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 ANO2Q9NQ90 1003 aa10.35□□□□□ -0.75
VAPB-201ENST00000265619 CPS1P31327 1500 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 ALDH1L2Q3SY69 923 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 ZNF526Q8TF50 670 aaPredicted RBP10.34□□□□□ -0.75
VAPB-201ENST00000265619 PIK3R4Q99570 1358 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 PATL2C9JE40 543 aaKnown RBP10.34□□□□□ -0.75
VAPB-201ENST00000265619 CLGNO14967 610 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 RGS12O14924 1447 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 ATP10DQ9P241 1426 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 FAM193AP78312 1265 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 EIF4A2Q14240 407 aaKnown RBP10.34□□□□□ -0.75
VAPB-201ENST00000265619 FILIP1Q7Z7B0 1213 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 TTC6Q86TZ1 520 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 UNC5CLQ8IV45 518 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 CCAR2Q8N163 923 aaKnown RBP10.34□□□□□ -0.75
VAPB-201ENST00000265619 ESYT1Q9BSJ8 1104 aa10.34□□□□□ -0.75
VAPB-201ENST00000265619 PLEKHG2Q9H7P9 1386 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 PTCH1Q13635 1447 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 CREBRFQ8IUR6 639 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 ZNF428Q96B54 188 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 PLEKHA4Q9H4M7 779 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 CEP170BQ9Y4F5 1589 aaPredicted RBP10.33□□□□□ -0.76
VAPB-201ENST00000265619 H3BQF6 201 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 TBC1D8O95759 1140 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 CCDC93Q567U6 631 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 CASC1Q6TDU7 716 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 PUS7Q96PZ0 661 aaKnown RBP10.33□□□□□ -0.76
VAPB-201ENST00000265619 NSD2O96028 1365 aa10.33□□□□□ -0.76
VAPB-201ENST00000265619 LMAN1P49257 510 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 FBXO18Q8NFZ0 1043 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 EDC4Q6P2E9 1401 aaKnown RBP10.32□□□□□ -0.76
VAPB-201ENST00000265619 CCDC69A6NI79 296 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 FERMT3Q86UX7 667 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 A0A0G2JS52 829 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 CLSTN1O94985 981 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 MAP3K11Q16584 847 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 DACT1Q9NYF0 836 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 ATP7BP35670 1465 aa10.32□□□□□ -0.76
VAPB-201ENST00000265619 ATP2B1P20020 1258 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 COL9A3Q14050 684 aaPredicted RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 NBPF6Q5VWK0 638 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 CEP85Q6P2H3 762 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 RUFY3Q7L099 469 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 NBPF4Q96M43 638 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 L2HGDHQ9H9P8 463 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 ORC3Q9UBD5 711 aaPredicted RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 CSB-PGBD3P0DP91 1061 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 CASTP20810 708 aaKnown RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 PDE1AP54750 535 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 E4F1Q66K89 784 aaPredicted RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 DDX54Q8TDD1 881 aaKnown RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 LRRC59Q96AG4 307 aaKnown RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 CARD10Q9BWT7 1032 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 MTMR6Q9Y217 621 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 CCDC171Q6TFL3 1326 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 NPHP4O75161 1426 aaPredicted RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 C11orf57Q6ZUT1 292 aaPredicted RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 C8orf58Q8NAV2 365 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 TDRD7Q8NHU6 1098 aaKnown RBP10.31□□□□□ -0.76
VAPB-201ENST00000265619 PSMD1Q99460 953 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 NUP62CLQ9H1M0 184 aa10.31□□□□□ -0.76
VAPB-201ENST00000265619 ADAM21Q9UKJ8 722 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms