RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 ECM2O94769 699 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-201ENST00000264640 HSPA8P11142 646 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-201ENST00000264640 PBX2P40425 430 aa9.22□□□□□ -0.93
SMARCE1-201ENST00000264640 RC3H1Q5TC82 1133 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-201ENST00000264640 CARMIL3Q8ND23 1372 aa9.22□□□□□ -0.93
SMARCE1-201ENST00000264640 NUDT7P0C024 238 aa9.21□□□□□ -0.94
SMARCE1-201ENST00000264640 CRKLP46109 303 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-201ENST00000264640 IFNL2Q8IZJ0 200 aa9.21□□□□□ -0.94
SMARCE1-201ENST00000264640 WBP1LQ9NX94 342 aa9.21□□□□□ -0.94
SMARCE1-201ENST00000264640 RBM19Q9Y4C8 960 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-201ENST00000264640 THSD7BQ9C0I4 1608 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 ADAMTSL1Q8N6G6 1762 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 SCN11AQ9UI33 1791 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 ARFGEF2Q9Y6D5 1785 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 SLX4Q8IY92 1834 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 PTCD1O75127 700 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 POTEEQ6S8J3 1075 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 LHX6Q9UPM6 363 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 PCDHGA4Q9Y5G9 962 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 CASP8AP2Q9UKL3 1982 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 PASKQ96RG2 1323 aa9.2□□□□□ -0.94
SMARCE1-201ENST00000264640 DDNO94850 711 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 IRX6P78412 446 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 CNGB1Q14028 1251 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 ERFEQ4G0M1 354 aa9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 USPL1Q5W0Q7 1092 aa9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 C2CD5Q86YS7 1000 aa9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 TTLL6Q8N841 843 aa9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 EYA1Q99502 592 aa9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 RNF123Q5XPI4 1314 aa9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 KIF24Q5T7B8 1368 aa9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 LTBP1Q14766 1721 aa9.19□□□□□ -0.94
SMARCE1-201ENST00000264640 TMEM88BA6NKF7 163 aa9.18□□□□□ -0.94
SMARCE1-201ENST00000264640 RGL2O15211 777 aa9.18□□□□□ -0.94
SMARCE1-201ENST00000264640 TM4SF1P30408 202 aa9.18□□□□□ -0.94
SMARCE1-201ENST00000264640 NFIXQ14938 502 aa9.18□□□□□ -0.94
SMARCE1-201ENST00000264640 TESK2Q96S53 571 aa9.18□□□□□ -0.94
SMARCE1-201ENST00000264640 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
SMARCE1-201ENST00000264640 TRPM7Q96QT4 1865 aa9.17□□□□□ -0.94
SMARCE1-201ENST00000264640 FANCIQ9NVI1 1328 aa9.17□□□□□ -0.94
SMARCE1-201ENST00000264640 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
SMARCE1-201ENST00000264640 PUS7Q96PZ0 661 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-201ENST00000264640 ANP32EQ9BTT0 268 aa9.17□□□□□ -0.94
SMARCE1-201ENST00000264640 PANK3Q9H999 370 aa9.17□□□□□ -0.94
SMARCE1-201ENST00000264640 TSKSQ9UJT2 592 aa9.17□□□□□ -0.94
SMARCE1-201ENST00000264640 SCN7AQ01118 1682 aa9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 C21orf2O43822 256 aa9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 ZPR1O75312 459 aa9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 RGS19P49795 217 aa9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 CABP4P57796 275 aa9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 EAPPQ56P03 285 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 INTS5Q6P9B9 1019 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 LDHDQ86WU2 507 aa9.16□□□□□ -0.94
SMARCE1-201ENST00000264640 NPC1L1Q9UHC9 1359 aa9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 WDR33Q9C0J8 1336 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 ERVV-2B6SEH9 535 aa9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 H0YIN7 160 aa9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 PPP1R37O75864 691 aa9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 SERPINB2P05120 415 aa9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 GRM1Q13255 1194 aa9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 CCDC24Q8N4L8 307 aa9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 ZNF622Q969S3 477 aaKnown RBP eCLIP9.15□□□□□ -0.942e-13■□□□□ 10
SMARCE1-201ENST00000264640 CCDC136Q96JN2 1154 aa9.15□□□□□ -0.94
SMARCE1-201ENST00000264640 COL15A1P39059 1388 aa9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 SOS1Q07889 1333 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 RASSF10A6NK89 507 aa9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 WDR43Q15061 677 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 DEFB115Q30KQ5 88 aa9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 ZNF530Q6P9A1 599 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 BICDL1Q6ZP65 573 aa9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 DNAJC10Q8IXB1 793 aa9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 TAOK3Q9H2K8 898 aa9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 TAF1DQ9H5J8 278 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 ABT1Q9ULW3 272 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-201ENST00000264640 IQCA1LA6NCM1 817 aa9.13□□□□□ -0.95
SMARCE1-201ENST00000264640 MAP2K1Q02750 393 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-201ENST00000264640 MAP1SQ66K74 1059 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-201ENST00000264640 NGEFQ8N5V2 710 aa9.13□□□□□ -0.95
SMARCE1-201ENST00000264640 BCL2L12Q9HB09 334 aa9.13□□□□□ -0.95
SMARCE1-201ENST00000264640 UBR2Q8IWV8 1755 aa9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 ZNF541Q9H0D2 1346 aa9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 HSP90AB1P08238 724 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 RRP1P56182 461 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 EIF4A2Q14240 407 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 CC2D1BQ5T0F9 858 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 NARFQ9UHQ1 456 aa9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 RCAN3Q9UKA8 241 aa9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 ZBTB1Q9Y2K1 713 aa9.12□□□□□ -0.95
SMARCE1-201ENST00000264640 MTHFSP49914 203 aa9.11□□□□□ -0.95
SMARCE1-201ENST00000264640 FMR1Q06787 632 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMARCE1-201ENST00000264640 PTCD2Q8WV60 388 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-201ENST00000264640 CAPNS2Q96L46 248 aa9.11□□□□□ -0.95
SMARCE1-201ENST00000264640 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms