RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 RGL2O15211 777 aa28.29■■■□□ 2.12
UFD1-201ENST00000263202 ARHGEF1Q92888 912 aaKnown RBP28.29■■■□□ 2.12
UFD1-201ENST00000263202 ZNF652Q9Y2D9 606 aa28.29■■■□□ 2.12
UFD1-201ENST00000263202 UBN2Q6ZU65 1347 aa28.29■■■□□ 2.12
UFD1-201ENST00000263202 CLEC4GQ6UXB4 293 aa28.29■■■□□ 2.12
UFD1-201ENST00000263202 SKAP1Q86WV1 359 aa28.29■■■□□ 2.12
UFD1-201ENST00000263202 SSH3Q8TE77 659 aa28.29■■■□□ 2.12
UFD1-201ENST00000263202 POLA2Q14181 598 aa28.28■■■□□ 2.12
UFD1-201ENST00000263202 PDZRN3Q9UPQ7 1066 aa28.28■■■□□ 2.12
UFD1-201ENST00000263202 PCCAP05165 728 aaPredicted RBP28.27■■■□□ 2.12
UFD1-201ENST00000263202 EPHA10Q5JZY3 1008 aa28.27■■■□□ 2.12
UFD1-201ENST00000263202 TRAPPC3LQ5T215 181 aa28.27■■■□□ 2.12
UFD1-201ENST00000263202 SRGAP3O43295 1099 aa28.27■■■□□ 2.12
UFD1-201ENST00000263202 PHF14O94880 888 aa28.27■■■□□ 2.12
UFD1-201ENST00000263202 RTL5Q5HYW3 569 aaPredicted RBP28.27■■■□□ 2.12
UFD1-201ENST00000263202 ZBTB38Q8NAP3 1195 aaPredicted RBP28.27■■■□□ 2.12
UFD1-201ENST00000263202 ADRA2BP18089 450 aa28.26■■■□□ 2.11
UFD1-201ENST00000263202 BCL2L12Q9HB09 334 aa28.26■■■□□ 2.11
UFD1-201ENST00000263202 SRP68Q9UHB9 627 aaKnown RBP28.26■■■□□ 2.11
UFD1-201ENST00000263202 USPL1Q5W0Q7 1092 aa28.25■■■□□ 2.11
UFD1-201ENST00000263202 TUBGCP6Q96RT7 1819 aa28.25■■■□□ 2.11
UFD1-201ENST00000263202 ZPR1O75312 459 aa28.25■■■□□ 2.11
UFD1-201ENST00000263202 RABL6Q3YEC7 729 aaPredicted RBP28.24■■■□□ 2.11
UFD1-201ENST00000263202 FAM89AQ96GI7 184 aa28.24■■■□□ 2.11
UFD1-201ENST00000263202 NIP7Q9Y221 180 aaKnown RBP eCLIP28.24■■■□□ 2.11
UFD1-201ENST00000263202 USP42Q9H9J4 1324 aaKnown RBP28.24■■■□□ 2.11
UFD1-201ENST00000263202 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.23■■■□□ 2.11
UFD1-201ENST00000263202 SSFA2P28290 1259 aa28.23■■■□□ 2.11
UFD1-201ENST00000263202 RFC4P35249 363 aa28.23■■■□□ 2.11
UFD1-201ENST00000263202 FOXO4P98177 505 aa28.23■■■□□ 2.11
UFD1-201ENST00000263202 NUCB1Q02818 461 aa28.23■■■□□ 2.11
UFD1-201ENST00000263202 PARP10Q53GL7 1025 aa28.23■■■□□ 2.11
UFD1-201ENST00000263202 CAMKK2Q96RR4 588 aa28.22■■■□□ 2.11
UFD1-201ENST00000263202 MYH3P11055 1940 aa28.22■■■□□ 2.11
UFD1-201ENST00000263202 SUSD4Q5VX71 490 aa28.22■■■□□ 2.11
UFD1-201ENST00000263202 PELP1Q8IZL8 1130 aaKnown RBP28.22■■■□□ 2.11
UFD1-201ENST00000263202 AKT1S1Q96B36 256 aa28.22■■■□□ 2.11
UFD1-201ENST00000263202 TRMT112Q9UI30 125 aaKnown RBP28.22■■■□□ 2.11
UFD1-201ENST00000263202 CDHR2Q9BYE9 1310 aa28.22■■■□□ 2.11
UFD1-201ENST00000263202 ZNF827Q17R98 1081 aa28.21■■■□□ 2.11
UFD1-201ENST00000263202 COL24A1Q17RW2 1714 aa28.2■■■□□ 2.11
UFD1-201ENST00000263202 EN1Q05925 392 aaPredicted RBP28.2■■■□□ 2.11
UFD1-201ENST00000263202 ANKRD45Q5TZF3 282 aa28.2■■■□□ 2.11
UFD1-201ENST00000263202 EZH2Q15910 746 aaKnown RBP28.2■■■□□ 2.1
UFD1-201ENST00000263202 SYNE4Q8N205 404 aa28.2■■■□□ 2.1
UFD1-201ENST00000263202 EXOC6BQ9Y2D4 811 aa28.2■■■□□ 2.1
UFD1-201ENST00000263202 TBC1D9BQ66K14 1250 aa28.19■■■□□ 2.1
UFD1-201ENST00000263202 CHD1LQ86WJ1 897 aa28.19■■■□□ 2.1
UFD1-201ENST00000263202 PLA2G12BQ9BX93 195 aa28.19■■■□□ 2.1
UFD1-201ENST00000263202 LAMB2P55268 1798 aa28.18■■■□□ 2.1
UFD1-201ENST00000263202 SF3B2Q13435 895 aaKnown RBP28.18■■■□□ 2.1
UFD1-201ENST00000263202 UTP14AQ9BVJ6 771 aaKnown RBP28.18■■■□□ 2.1
UFD1-201ENST00000263202 DDX60Q8IY21 1712 aaKnown RBP28.18■■■□□ 2.1
UFD1-201ENST00000263202 LMBR1LQ6UX01 489 aa28.18■■■□□ 2.1
UFD1-201ENST00000263202 NTSR2O95665 410 aa28.17■■■□□ 2.1
UFD1-201ENST00000263202 RGS3P49796 1198 aa28.16■■■□□ 2.1
UFD1-201ENST00000263202 LNPKQ9C0E8 428 aa28.16■■■□□ 2.1
UFD1-201ENST00000263202 TFCP2L1Q9NZI6 479 aa28.16■■■□□ 2.1
UFD1-201ENST00000263202 FAM177BA6PVY3 158 aa28.15■■■□□ 2.1
UFD1-201ENST00000263202 SURF6O75683 361 aaKnown RBP28.15■■■□□ 2.1
UFD1-201ENST00000263202 NOP58Q9Y2X3 529 aaKnown RBP28.15■■■□□ 2.1
UFD1-201ENST00000263202 IRS4O14654 1257 aaPredicted RBP28.15■■■□□ 2.1
UFD1-201ENST00000263202 PDE4AP27815 886 aa28.15■■■□□ 2.1
UFD1-201ENST00000263202 BAG6P46379 1132 aa28.15■■■□□ 2.1
UFD1-201ENST00000263202 SH3TC1Q8TE82 1336 aa28.15■■■□□ 2.1
UFD1-201ENST00000263202 APBB1O00213 710 aa28.14■■■□□ 2.1
UFD1-201ENST00000263202 BICDL1Q6ZP65 573 aa28.14■■■□□ 2.1
UFD1-201ENST00000263202 RFX5P48382 616 aaPredicted RBP28.13■■■□□ 2.09
UFD1-201ENST00000263202 PA2G4Q9UQ80 394 aaKnown RBP28.13■■■□□ 2.09
UFD1-201ENST00000263202 SETDB2Q96T68 719 aa28.13■■■□□ 2.09
UFD1-201ENST00000263202 CSF1RP07333 972 aa28.12■■■□□ 2.09
UFD1-201ENST00000263202 CASZ1Q86V15 1759 aa28.12■■■□□ 2.09
UFD1-201ENST00000263202 PDE8AO60658 829 aa28.11■■■□□ 2.09
UFD1-201ENST00000263202 RAB11FIP3O75154 756 aa28.11■■■□□ 2.09
UFD1-201ENST00000263202 GYS1P13807 737 aa28.11■■■□□ 2.09
UFD1-201ENST00000263202 DEFB132Q7Z7B7 95 aa28.11■■■□□ 2.09
UFD1-201ENST00000263202 CHMP3Q9Y3E7 222 aa28.11■■■□□ 2.09
UFD1-201ENST00000263202 QSER1Q2KHR3 1735 aa28.11■■■□□ 2.09
UFD1-201ENST00000263202 SMARCA5O60264 1052 aaPredicted RBP28.11■■■□□ 2.09
UFD1-201ENST00000263202 HSP90AB4PQ58FF6 505 aa28.11■■■□□ 2.09
UFD1-201ENST00000263202 LRRCC1Q9C099 1032 aa28.11■■■□□ 2.09
UFD1-201ENST00000263202 NUTM1Q86Y26 1132 aa28.1■■■□□ 2.09
UFD1-201ENST00000263202 KLHDC4Q8TBB5 520 aa28.1■■■□□ 2.09
UFD1-201ENST00000263202 COPRSQ9NQ92 184 aa28.1■■■□□ 2.09
UFD1-201ENST00000263202 ZBTB47Q9UFB7 747 aaPredicted RBP28.1■■■□□ 2.09
UFD1-201ENST00000263202 CTSWP56202 376 aa28.09■■■□□ 2.09
UFD1-201ENST00000263202 PTPN12Q05209 780 aaKnown RBP28.09■■■□□ 2.09
UFD1-201ENST00000263202 FLAD1Q8NFF5 587 aa28.09■■■□□ 2.09
UFD1-201ENST00000263202 COL23A1Q86Y22 540 aaPredicted RBP28.08■■■□□ 2.09
UFD1-201ENST00000263202 CCDC125Q86Z20 511 aa28.08■■■□□ 2.09
UFD1-201ENST00000263202 TTLL11Q8NHH1 800 aa28.08■■■□□ 2.09
UFD1-201ENST00000263202 HCLS1P14317 486 aaPredicted RBP28.08■■■□□ 2.09
UFD1-201ENST00000263202 NFIXQ14938 502 aa28.08■■■□□ 2.09
UFD1-201ENST00000263202 NYXQ9GZU5 481 aa28.08■■■□□ 2.09
UFD1-201ENST00000263202 ANO8Q9HCE9 1232 aaPredicted RBP28.08■■■□□ 2.09
UFD1-201ENST00000263202 PNPLA7Q6ZV29 1317 aa28.07■■■□□ 2.08
UFD1-201ENST00000263202 ERFEQ4G0M1 354 aa28.06■■■□□ 2.08
UFD1-201ENST00000263202 RHPN1Q8TCX5 695 aa28.06■■■□□ 2.08
UFD1-201ENST00000263202 CARMIL3Q8ND23 1372 aa28.06■■■□□ 2.08
UFD1-201ENST00000263202 HSP90B1P14625 803 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms