RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 MYH16Q9H6N6 1097 aa27.31■■□□□ 1.96
CCNE1-201ENST00000262643 ZNF521Q96K83 1311 aa27.31■■□□□ 1.96
CCNE1-201ENST00000262643 STYK1Q6J9G0 422 aa27.31■■□□□ 1.96
CCNE1-201ENST00000262643 UTP14AQ9BVJ6 771 aaKnown RBP27.31■■□□□ 1.96
CCNE1-201ENST00000262643 STK31Q9BXU1 1019 aa27.31■■□□□ 1.96
CCNE1-201ENST00000262643 CACNA1SQ13698 1873 aa27.3■■□□□ 1.96
CCNE1-201ENST00000262643 RIC3Q7Z5B4 369 aa27.3■■□□□ 1.96
CCNE1-201ENST00000262643 NLRP10Q86W26 655 aa27.3■■□□□ 1.96
CCNE1-201ENST00000262643 TNRC6CQ9HCJ0 1690 aaKnown RBP27.3■■□□□ 1.96
CCNE1-201ENST00000262643 CNKSR1Q969H4 720 aa27.29■■□□□ 1.96
CCNE1-201ENST00000262643 KLRG2A4D1S0 409 aaPredicted RBP27.29■■□□□ 1.96
CCNE1-201ENST00000262643 ATP5J2-PTCD1G3V325 749 aa27.28■■□□□ 1.96
CCNE1-201ENST00000262643 NPR1P16066 1061 aa27.28■■□□□ 1.96
CCNE1-201ENST00000262643 ARFGEF2Q9Y6D5 1785 aa27.28■■□□□ 1.96
CCNE1-201ENST00000262643 C21orf2O43822 256 aa27.28■■□□□ 1.96
CCNE1-201ENST00000262643 PRPF40BQ6NWY9 871 aaKnown RBP27.27■■□□□ 1.96
CCNE1-201ENST00000262643 SLX4Q8IY92 1834 aa27.27■■□□□ 1.96
CCNE1-201ENST00000262643 NEFLP07196 543 aa27.26■■□□□ 1.95
CCNE1-201ENST00000262643 TRMT112Q9UI30 125 aaKnown RBP27.26■■□□□ 1.95
CCNE1-201ENST00000262643 SLC4A2P04920 1241 aa27.26■■□□□ 1.95
CCNE1-201ENST00000262643 VAMP4O75379 141 aa27.25■■□□□ 1.95
CCNE1-201ENST00000262643 RASSF7Q02833 373 aa27.24■■□□□ 1.95
CCNE1-201ENST00000262643 SYNE4Q8N205 404 aa27.24■■□□□ 1.95
CCNE1-201ENST00000262643 ISCA1Q9BUE6 129 aa27.24■■□□□ 1.95
CCNE1-201ENST00000262643 DDX58O95786 925 aaKnown RBP27.24■■□□□ 1.95
CCNE1-201ENST00000262643 CRY2Q49AN0 593 aa27.24■■□□□ 1.95
CCNE1-201ENST00000262643 C3orf67Q6ZVT6 689 aa27.23■■□□□ 1.95
CCNE1-201ENST00000262643 ADCY9O60503 1353 aa27.23■■□□□ 1.95
CCNE1-201ENST00000262643 C9orf131Q5VYM1 1079 aa27.23■■□□□ 1.95
CCNE1-201ENST00000262643 G2E3Q7L622 706 aa27.23■■□□□ 1.95
CCNE1-201ENST00000262643 RPGRQ92834 1020 aaKnown RBP27.23■■□□□ 1.95
CCNE1-201ENST00000262643 RIC1Q4ADV7 1423 aa27.22■■□□□ 1.95
CCNE1-201ENST00000262643 NLRP3Q96P20 1036 aa27.22■■□□□ 1.95
CCNE1-201ENST00000262643 MYD88Q99836 296 aa27.22■■□□□ 1.95
CCNE1-201ENST00000262643 RNF123Q5XPI4 1314 aa27.22■■□□□ 1.95
CCNE1-201ENST00000262643 SH3TC1Q8TE82 1336 aa27.22■■□□□ 1.95
CCNE1-201ENST00000262643 HCLS1P14317 486 aaPredicted RBP27.21■■□□□ 1.95
CCNE1-201ENST00000262643 IRX6P78412 446 aaPredicted RBP27.21■■□□□ 1.95
CCNE1-201ENST00000262643 ZNF526Q8TF50 670 aaPredicted RBP27.21■■□□□ 1.95
CCNE1-201ENST00000262643 SLC10A5Q5PT55 438 aa27.21■■□□□ 1.95
CCNE1-201ENST00000262643 RNF181Q9P0P0 153 aa27.21■■□□□ 1.95
CCNE1-201ENST00000262643 MAP3K2Q9Y2U5 619 aa27.21■■□□□ 1.95
CCNE1-201ENST00000262643 ALDH1B1P30837 517 aa27.2■■□□□ 1.94
CCNE1-201ENST00000262643 RTL5Q5HYW3 569 aaPredicted RBP27.2■■□□□ 1.94
CCNE1-201ENST00000262643 FAM89AQ96GI7 184 aa27.2■■□□□ 1.94
CCNE1-201ENST00000262643 PI4KAP2A4QPH2 592 aa27.19■■□□□ 1.94
CCNE1-201ENST00000262643 PI4KAP1Q8N8J0 262 aa27.19■■□□□ 1.94
CCNE1-201ENST00000262643 SBF1O95248 1867 aa27.19■■□□□ 1.94
CCNE1-201ENST00000262643 NFKBIEO00221 500 aa27.19■■□□□ 1.94
CCNE1-201ENST00000262643 SLFN5Q08AF3 891 aa27.19■■□□□ 1.94
CCNE1-201ENST00000262643 KSR2Q6VAB6 950 aa27.18■■□□□ 1.94
CCNE1-201ENST00000262643 METTL22Q9BUU2 404 aaPredicted RBP27.18■■□□□ 1.94
CCNE1-201ENST00000262643 E9PSI1 815 aa27.17■■□□□ 1.94
CCNE1-201ENST00000262643 TRIM28Q13263 835 aaKnown RBP27.17■■□□□ 1.94
CCNE1-201ENST00000262643 FLIIQ13045 1269 aa27.17■■□□□ 1.94
CCNE1-201ENST00000262643 OLFM4Q6UX06 510 aa27.17■■□□□ 1.94
CCNE1-201ENST00000262643 HOXA10P31260 410 aaPredicted RBP27.16■■□□□ 1.94
CCNE1-201ENST00000262643 C7orf43Q8WVR3 580 aa27.16■■□□□ 1.94
CCNE1-201ENST00000262643 RBM17Q96I25 401 aaKnown RBP27.16■■□□□ 1.94
CCNE1-201ENST00000262643 CACNA1FO60840 1977 aa27.16■■□□□ 1.94
CCNE1-201ENST00000262643 PRELPP51888 382 aa27.16■■□□□ 1.94
CCNE1-201ENST00000262643 SOGA3Q5TF21 947 aa27.16■■□□□ 1.94
CCNE1-201ENST00000262643 FER1L6Q2WGJ9 1857 aa27.15■■□□□ 1.94
CCNE1-201ENST00000262643 LMNB1P20700 586 aa27.15■■□□□ 1.94
CCNE1-201ENST00000262643 FKBP5Q13451 457 aaPredicted RBP27.15■■□□□ 1.94
CCNE1-201ENST00000262643 CCDC88AQ3V6T2 1871 aa27.14■■□□□ 1.94
CCNE1-201ENST00000262643 TRMT2AQ8IZ69 625 aaKnown RBP27.14■■□□□ 1.94
CCNE1-201ENST00000262643 RCAN3Q9UKA8 241 aa27.14■■□□□ 1.94
CCNE1-201ENST00000262643 CCDC191Q8NCU4 936 aa27.14■■□□□ 1.93
CCNE1-201ENST00000262643 TAOK3Q9H2K8 898 aa27.14■■□□□ 1.93
CCNE1-201ENST00000262643 GPBP1L1Q9HC44 474 aaPredicted RBP27.14■■□□□ 1.93
CCNE1-201ENST00000262643 LAMB2P55268 1798 aa27.14■■□□□ 1.93
CCNE1-201ENST00000262643 CCDC93Q567U6 631 aa27.13■■□□□ 1.93
CCNE1-201ENST00000262643 CRAMP1Q96RY5 1269 aa27.13■■□□□ 1.93
CCNE1-201ENST00000262643 CWC25Q9NXE8 425 aaPredicted RBP27.13■■□□□ 1.93
CCNE1-201ENST00000262643 NEXNQ0ZGT2 675 aa27.12■■□□□ 1.93
CCNE1-201ENST00000262643 ZBTB38Q8NAP3 1195 aaPredicted RBP27.12■■□□□ 1.93
CCNE1-201ENST00000262643 DDX60Q8IY21 1712 aaKnown RBP27.12■■□□□ 1.93
CCNE1-201ENST00000262643 IRS4O14654 1257 aaPredicted RBP27.11■■□□□ 1.93
CCNE1-201ENST00000262643 JARID2Q92833 1246 aaPredicted RBP27.11■■□□□ 1.93
CCNE1-201ENST00000262643 IGKV5-2P06315 115 aa27.11■■□□□ 1.93
CCNE1-201ENST00000262643 ABCC4O15439 1325 aa27.09■■□□□ 1.93
CCNE1-201ENST00000262643 PPEF1O14829 653 aaPredicted RBP27.09■■□□□ 1.93
CCNE1-201ENST00000262643 CWF19L2Q2TBE0 894 aaKnown RBP27.09■■□□□ 1.93
CCNE1-201ENST00000262643 SLC51AQ86UW1 340 aa27.09■■□□□ 1.93
CCNE1-201ENST00000262643 DDX46Q7L014 1031 aaKnown RBP27.09■■□□□ 1.93
CCNE1-201ENST00000262643 LTBP3Q9NS15 1303 aa27.08■■□□□ 1.93
CCNE1-201ENST00000262643 RTKN2Q8IZC4 609 aa27.07■■□□□ 1.92
CCNE1-201ENST00000262643 DNAAF4Q8WXU2 420 aa27.07■■□□□ 1.92
CCNE1-201ENST00000262643 PCCAP05165 728 aaPredicted RBP27.07■■□□□ 1.92
CCNE1-201ENST00000262643 NEURL1BA8MQ27 555 aa27.06■■□□□ 1.92
CCNE1-201ENST00000262643 TAF1P21675 1872 aa27.06■■□□□ 1.92
CCNE1-201ENST00000262643 F6X3S4 739 aa27.06■■□□□ 1.92
CCNE1-201ENST00000262643 FKBP4Q02790 459 aaKnown RBP eCLIP27.06■■□□□ 1.92
CCNE1-201ENST00000262643 TIAM2Q8IVF5 1701 aa27.04■■□□□ 1.92
CCNE1-201ENST00000262643 SF3B3Q15393 1217 aaKnown RBP27.04■■□□□ 1.92
CCNE1-201ENST00000262643 ZNF277Q9NRM2 450 aaPredicted RBP27.04■■□□□ 1.92
CCNE1-201ENST00000262643 GRAPQ13588 217 aa27.03■■□□□ 1.92
CCNE1-201ENST00000262643 CC2D2BQ6DHV5 1058 aa27.03■■□□□ 1.92
CCNE1-201ENST00000262643 GRAPLQ8TC17 118 aaPredicted RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms