RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 F6X3S4 739 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 GPTP24298 496 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 SPECC1LQ69YQ0 1117 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 SPATA24Q86W54 205 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 RNF41Q9H4P4 317 aaPredicted RBP16.42■□□□□ 0.22
CUX2-201ENST00000261726 DAPK1P53355 1430 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 C6orf163Q5TEZ5 329 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 FERMT1Q9BQL6 677 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 KIF14Q15058 1648 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 ERBINQ96RT1 1412 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 CTAGE5O15320 804 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 ACTN2P35609 894 aa16.42■□□□□ 0.22
CUX2-201ENST00000261726 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
CUX2-201ENST00000261726 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
CUX2-201ENST00000261726 SYNCQ9H7C4 482 aa16.41■□□□□ 0.22
CUX2-201ENST00000261726 TERF1P54274 439 aa16.41■□□□□ 0.22
CUX2-201ENST00000261726 GJB2P29033 226 aa16.41■□□□□ 0.22
CUX2-201ENST00000261726 TMEM67Q5HYA8 995 aa16.41■□□□□ 0.22
CUX2-201ENST00000261726 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
CUX2-201ENST00000261726 CEP112Q8N8E3 955 aa16.41■□□□□ 0.22
CUX2-201ENST00000261726 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
CUX2-201ENST00000261726 ADAMTS2O95450 1211 aa16.4■□□□□ 0.22
CUX2-201ENST00000261726 HAND2P61296 217 aa16.4■□□□□ 0.22
CUX2-201ENST00000261726 MXRA7P84157 204 aa16.4■□□□□ 0.22
CUX2-201ENST00000261726 STX1AQ16623 288 aa16.4■□□□□ 0.22
CUX2-201ENST00000261726 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
CUX2-201ENST00000261726 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
CUX2-201ENST00000261726 OTUD6BQ8N6M0 293 aa16.4■□□□□ 0.22
CUX2-201ENST00000261726 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
CUX2-201ENST00000261726 FBF1Q8TES7 1133 aa16.4■□□□□ 0.22
CUX2-201ENST00000261726 TSPY2A6NKD2 308 aa16.39■□□□□ 0.22
CUX2-201ENST00000261726 STXBP4Q6ZWJ1 553 aa16.39■□□□□ 0.22
CUX2-201ENST00000261726 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.22
CUX2-201ENST00000261726 CCDC174Q6PII3 467 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 POTEB2H3BUK9 544 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 GOLIM4O00461 696 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
CUX2-201ENST00000261726 MICU3Q86XE3 530 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 CCDC12Q8WUD4 166 aaPredicted RBP16.39■□□□□ 0.21
CUX2-201ENST00000261726 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 TTC21AQ8NDW8 1320 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 HSF2BPO75031 334 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 KIAA0753Q2KHM9 967 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 SLC26A6Q9BXS9 759 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
CUX2-201ENST00000261726 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
CUX2-201ENST00000261726 SKAP1Q86WV1 359 aa16.38■□□□□ 0.21
CUX2-201ENST00000261726 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
CUX2-201ENST00000261726 CALCOCO1Q9P1Z2 691 aa16.38■□□□□ 0.21
CUX2-201ENST00000261726 KIAA0556O60303 1618 aa16.38■□□□□ 0.21
CUX2-201ENST00000261726 ADCY5O95622 1261 aa16.38■□□□□ 0.21
CUX2-201ENST00000261726 RAB3IL1Q8TBN0 382 aa16.38■□□□□ 0.21
CUX2-201ENST00000261726 SNRKQ9NRH2 765 aa16.38■□□□□ 0.21
CUX2-201ENST00000261726 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
CUX2-201ENST00000261726 EXOC1Q9NV70 894 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 UBA7P41226 1012 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 GSDMDP57764 484 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 NUDT16Q96DE0 195 aaKnown RBP16.37■□□□□ 0.21
CUX2-201ENST00000261726 TRIM47Q96LD4 638 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 TBCAO75347 108 aaKnown RBP16.37■□□□□ 0.21
CUX2-201ENST00000261726 GJC1P36383 396 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 KIF5BP33176 963 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 ZBTB3Q9H5J0 574 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 CABP5Q9NP86 173 aa16.37■□□□□ 0.21
CUX2-201ENST00000261726 CAMSAP2Q08AD1 1489 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 PLEKHH1Q9ULM0 1364 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 BBXQ8WY36 941 aaPredicted RBP16.36■□□□□ 0.21
CUX2-201ENST00000261726 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 METAP2P50579 478 aaKnown RBP eCLIP16.36■□□□□ 0.21
CUX2-201ENST00000261726 KCNH5Q8NCM2 988 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 TBC1D5Q92609 795 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 DDX19AQ9NUU7 478 aaKnown RBP16.36■□□□□ 0.21
CUX2-201ENST00000261726 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
CUX2-201ENST00000261726 HSP90AA4PQ58FG1 418 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 CCDC155Q8N6L0 562 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 IQCGQ9H095 443 aaKnown RBP16.36■□□□□ 0.21
CUX2-201ENST00000261726 STX6O43752 255 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 GNG11P61952 73 aa16.36■□□□□ 0.21
CUX2-201ENST00000261726 SLFN5Q08AF3 891 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 SREK1Q8WXA9 508 aaKnown RBP16.35■□□□□ 0.21
CUX2-201ENST00000261726 CEP135Q66GS9 1140 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 VTI1AQ96AJ9 217 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 PDE4BQ07343 736 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 GRM1Q13255 1194 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 CCDC160A6NGH7 325 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 MFSD6Q6ZSS7 791 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
CUX2-201ENST00000261726 TMEM110-MUSTN1A8MSY1 372 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 DPH6Q7L8W6 267 aa16.35■□□□□ 0.21
CUX2-201ENST00000261726 AFMP43652 599 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 CCDC63Q8NA47 563 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 DNAAF4Q8WXU2 420 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
CUX2-201ENST00000261726 PHACTR2O75167 634 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 CKAP4Q07065 602 aaKnown RBP16.34■□□□□ 0.21
CUX2-201ENST00000261726 CCDC6Q16204 474 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 ATAD2Q6PL18 1390 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 N4BP3O15049 544 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms