RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ATF7IPQ6VMQ6 1270 aa7.52□□□□□ -1.2
TOPBP1-201ENST00000260810 MYH1P12882 1939 aa7.52□□□□□ -1.2
TOPBP1-201ENST00000260810 NEDD4P46934 1319 aa7.52□□□□□ -1.21
TOPBP1-201ENST00000260810 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
TOPBP1-201ENST00000260810 CLUAP1Q96AJ1 413 aa7.52□□□□□ -1.21
TOPBP1-201ENST00000260810 AFF2P51816 1311 aa7.52□□□□□ -1.21
TOPBP1-201ENST00000260810 EDIL3O43854 480 aa7.52□□□□□ -1.21
TOPBP1-201ENST00000260810 MVPQ14764 893 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-201ENST00000260810 SUCLG2Q96I99 432 aa7.52□□□□□ -1.21
TOPBP1-201ENST00000260810 ADGRA1Q86SQ6 560 aa7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 STAG3Q9UJ98 1225 aa7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 BAZ2BQ9UIF8 2168 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 DNAJC10Q8IXB1 793 aa7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 ZNF34Q8IZ26 560 aa7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 EDC3Q96F86 508 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 MYH6P13533 1939 aa7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 PUS3Q9BZE2 481 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 GNAT3A8MTJ3 354 aa7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 E9PSI1 815 aa7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 GJD4Q96KN9 370 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 PGAP2Q9UHJ9 254 aa7.51□□□□□ -1.21
TOPBP1-201ENST00000260810 PRIM1P49642 420 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 SLC35G1Q2M3R5 365 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 HDGFL2Q7Z4V5 671 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 SNRKQ9NRH2 765 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 NBPF19A0A087WUL8 3843 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 PPM1GO15355 546 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 ILDR1Q86SU0 546 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 CSF1RP07333 972 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 PTGER2P43116 358 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 PLEKHM2Q8IWE5 1019 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 DOCK3Q8IZD9 2030 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 H7C1W4 665 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 TWISTNBQ3B726 338 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 SSH3Q8TE77 659 aa7.5□□□□□ -1.21
TOPBP1-201ENST00000260810 RFX7Q2KHR2 1363 aa7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 NTSR2O95665 410 aa7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 FAM98CQ17RN3 349 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 USP42Q9H9J4 1324 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 NEURL1BA8MQ27 555 aa7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 HDAC1Q13547 482 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 ZNF609O15014 1411 aa7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 MYH8P13535 1937 aa7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 MYH4Q9Y623 1939 aa7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 NECTIN2Q92692 538 aa7.49□□□□□ -1.21
TOPBP1-201ENST00000260810 U2SURPO15042 1029 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 PALD1Q9ULE6 856 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 SMARCA5O60264 1052 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 PDE3BQ13370 1112 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 HTATSF1O43719 755 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 ADAMTS2O95450 1211 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 ALDH1L2Q3SY69 923 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 CDCA8Q53HL2 280 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 PI16Q6UXB8 463 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 BCANQ96GW7 911 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 PA2G4Q9UQ80 394 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 FGFR2P21802 821 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 FLIIQ13045 1269 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 ARHGAP45Q92619 1136 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 SIP14410 1827 aa7.48□□□□□ -1.21
TOPBP1-201ENST00000260810 PI4KAP2A4QPH2 592 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 PI4KAP1Q8N8J0 262 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 RBM42Q9BTD8 480 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 SSC5DA1L4H1 1573 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 NUCB1Q02818 461 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 BACH2Q9BYV9 841 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 PCDHAC2Q9Y5I4 1007 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 DCTPP1Q9H773 170 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 KCNH5Q8NCM2 988 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 ZDHHC9Q9Y397 364 aa7.47□□□□□ -1.21
TOPBP1-201ENST00000260810 PLEKHG5O94827 1062 aa7.46□□□□□ -1.21
TOPBP1-201ENST00000260810 TAF7Q15545 349 aaPredicted RBP7.46□□□□□ -1.21
TOPBP1-201ENST00000260810 EAF2Q96CJ1 260 aaPredicted RBP7.46□□□□□ -1.21
TOPBP1-201ENST00000260810 PDE3AQ14432 1141 aa7.46□□□□□ -1.22
TOPBP1-201ENST00000260810 SRP68Q9UHB9 627 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-201ENST00000260810 MYH7BA7E2Y1 1941 aa7.46□□□□□ -1.22
TOPBP1-201ENST00000260810 PIP4K2BP78356 416 aa7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 LRRC24Q50LG9 513 aa7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 KCNQ5Q9NR82 932 aa7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 NOP58Q9Y2X3 529 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 RIPOR2Q9Y4F9 1068 aa7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 SPATA31A6Q5VVP1 1343 aa7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 ASH1LQ9NR48 2969 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 TCRBV5S4A2TA0A5A2 114 aa7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 UBE2Q2LH0YL09 131 aa7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 SUSD4Q5VX71 490 aa7.45□□□□□ -1.22
TOPBP1-201ENST00000260810 SHROOM1Q2M3G4 852 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-201ENST00000260810 DCAF5Q96JK2 942 aa7.44□□□□□ -1.22
TOPBP1-201ENST00000260810 IL2RBP14784 551 aa7.44□□□□□ -1.22
TOPBP1-201ENST00000260810 CRY2Q49AN0 593 aa7.44□□□□□ -1.22
TOPBP1-201ENST00000260810 USP35Q9P2H5 1018 aa7.44□□□□□ -1.22
TOPBP1-201ENST00000260810 PKP1Q13835 747 aa7.44□□□□□ -1.22
TOPBP1-201ENST00000260810 OSBPL3Q9H4L5 887 aa7.44□□□□□ -1.22
TOPBP1-201ENST00000260810 SLC4A2P04920 1241 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 ATF3P18847 181 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 JAG1P78504 1218 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 TBC1D9BQ66K14 1250 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 ACSBG1Q96GR2 724 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms