RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 PCDH11XQ9BZA7 1347 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 PCDH11YQ9BZA8 1340 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 TSPY2A6NKD2 308 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 GPTP24298 496 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 IREB2P48200 963 aaKnown RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 STK38Q15208 465 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 CFAP58Q5T655 872 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 FILIP1Q7Z7B0 1213 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 CCAR2Q8N163 923 aaKnown RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 NAP1L5Q96NT1 182 aaPredicted RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 HINFPQ9BQA5 517 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 PYM1Q9BRP8 204 aaKnown RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 VPS37CA5D8V6 355 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 BACH1O14867 736 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 TLR3O15455 904 aaKnown RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 RANBP6O60518 1105 aaKnown RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 PDE4AP27815 886 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 AMPD3Q01432 767 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 NUTM1Q86Y26 1132 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 ZNF428Q96B54 188 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 COA7Q96BR5 231 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 CCDC77Q9BR77 488 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 TTC12Q9H892 705 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 DBF4Q9UBU7 674 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 U3KPZ7 1027 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 BRD4O60885 1362 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 CCER2I3L3R5 266 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 SRGAP3O43295 1099 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 MAP3K7O43318 606 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 TBCAO75347 108 aaKnown RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 CCDC172P0C7W6 258 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 FERP16591 822 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 CTNNA2P26232 953 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 ZNF449Q6P9G9 518 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 SYCP3Q8IZU3 236 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 SYNCQ9H7C4 482 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 GIGYF1O75420 1035 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 ECM2O94769 699 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 CALML3P27482 149 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 KIF4BQ2VIQ3 1234 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 TWISTNBQ3B726 338 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 RUFY4Q6ZNE9 571 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 CCDC91Q7Z6B0 441 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 DZIP3Q86Y13 1208 aaKnown RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 GSDMBQ8TAX9 411 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 KIAA1524Q8TCG1 905 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 TBC1D22AQ8WUA7 517 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 CNPY2Q9Y2B0 182 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 NFKBIAP25963 317 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 C2CD5Q86YS7 1000 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 MICAL1Q8TDZ2 1067 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 ERCC4Q92889 916 aaPredicted RBP4.67□□□□□ -1.66
RNF38-201ENST00000259605 SIRT1Q96EB6 747 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 GLT8D2Q9H1C3 349 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 TSHZ2Q9NRE2 1034 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 SLC8A2Q9UPR5 921 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 FAM50BQ9Y247 325 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 PLEKHH1Q9ULM0 1364 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 PTPRKQ15262 1439 aa4.67□□□□□ -1.66
RNF38-201ENST00000259605 SPDYE3A6NKU9 549 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 NBPF26B4DH59 902 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 F8W031 263 aaPredicted RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 SLC4A2P04920 1241 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CEP57L1Q8IYX8 460 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CCDC155Q8N6L0 562 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CCDC89Q8N998 374 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 NFATC2IPQ8NCF5 419 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 SREK1Q8WXA9 508 aaKnown RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 SLC10A4Q96EP9 437 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CCDC85AQ96PX6 553 aaPredicted RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 FOXD4L1Q9NU39 408 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 TYW5A2RUC4 315 aaKnown RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 GTPBP6O43824 516 aaPredicted RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 KINO60870 393 aaKnown RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 GAS8O95995 478 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 XRCC6P12956 609 aaKnown RBP eCLIP4.66□□□□□ -1.66
RNF38-201ENST00000259605 KRT10P13645 584 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 MCM2P49736 904 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 DPP9Q86TI2 863 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 MPNDQ8N594 471 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CCDC148Q8NFR7 591 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CALML4Q96GE6 196 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 SIL1Q9H173 461 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 ERBINQ96RT1 1412 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 RAD54L2Q9Y4B4 1467 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CCDC175P0C221 793 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 IRX6P78412 446 aaPredicted RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 TROQ12816 1431 aaPredicted RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 NSMCE1Q8WV22 266 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 DDX12PQ92771 950 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CEP83Q9Y592 693 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 KIAA0586Q9BVV6 1533 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CAPN15O75808 1086 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 CT47B1P0C2W7 299 aaPredicted RBP4.66□□□□□ -1.66
RNF38-201ENST00000259605 TSPY3P0CV98 308 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 TSPY8P0CW00 308 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 RAB3IL1Q8TBN0 382 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 PPM1EQ8WY54 764 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 UBA5Q9GZZ9 404 aa4.66□□□□□ -1.66
RNF38-201ENST00000259605 TCP11L1Q9NUJ3 509 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms