RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ADCY5O95622 1261 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 SKILP12757 684 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 BICD1Q96G01 975 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 DEUP1Q05D60 604 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 TMED1Q13445 227 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 MAP7Q14244 749 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 CCDC73Q6ZRK6 1079 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 HOOK3Q86VS8 718 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 PPFIBP2Q8ND30 876 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 ZNF428Q96B54 188 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 RNF8O76064 485 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 ACTN2P35609 894 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 PDRG1Q9NUG6 133 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 LIMCH1Q9UPQ0 1083 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 FAM135AQ9P2D6 1515 aa7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 PSMC1P62191 440 aaKnown RBP7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 APBB1IPQ7Z5R6 666 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 TNPO1Q92973 898 aaKnown RBP7.76□□□□□ -1.17
PDGFRA-201ENST00000257290 CHUKO15111 745 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 LRSAM1Q6UWE0 723 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 TTC14Q96N46 770 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 ZSCAN12O43309 604 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 OAS2P29728 719 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 GJA8P48165 433 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 NLRP5P59047 1200 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 MTA1Q13330 715 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 CCDC57Q2TAC2 916 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 APBB1O00213 710 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 LUC7LQ9NQ29 371 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 DNMT1P26358 1616 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 SYCP2Q9BX26 1530 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 SMAPO00193 183 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 URI1O94763 535 aaPredicted RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 FBXO18Q8NFZ0 1043 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 PRR29P0C7W0 189 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 CASTP20810 708 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 CAPN7Q9Y6W3 813 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 RPRD2Q5VT52 1461 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 PTPRKQ15262 1439 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 SMG6Q86US8 1419 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 XBP1P17861 261 aa7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 NGDNQ8NEJ9 315 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 TPX2Q9ULW0 747 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-201ENST00000257290 DHX29Q7Z478 1369 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 A6NNZ2 444 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 ATICP31939 592 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 LIG3P49916 1009 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 ZSCAN23Q3MJ62 389 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 TUBB8Q3ZCM7 444 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 TADA2BQ86TJ2 420 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 MINK1Q8N4C8 1332 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 SASH1O94885 1247 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 RAPGEF3O95398 923 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 ARHGAP29Q52LW3 1261 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 CEP57L1Q8IYX8 460 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 CCDC110Q8TBZ0 833 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 TEX14Q8IWB6 1497 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 RAD50Q92878 1312 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 PPFIA3O75145 1194 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 TROVE2P10155 538 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 SFSWAPQ12872 951 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 UBE2Q1Q7Z7E8 422 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 SPATS2Q86XZ4 545 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 OGFOD1Q8N543 542 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 DDX41Q9UJV9 622 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 TBC1D2Q9BYX2 928 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 ITGB1BP2Q9UKP3 347 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 PPP6R1Q9UPN7 881 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 CRYMQ14894 314 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 SNCBQ16143 134 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 TSR1Q2NL82 804 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 OSBPL9Q96SU4 736 aa7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 METTL14Q9HCE5 456 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-201ENST00000257290 BRD4O60885 1362 aaPredicted RBP7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 PCK1P35558 622 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 SLC30A9Q6PML9 568 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 TRIM74Q86UV6 250 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 TRIM73Q86UV7 250 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 COG3Q96JB2 828 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 ANKRD62A6NC57 917 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 LAMB3Q13751 1172 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 OLFML1Q6UWY5 402 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 HYPKQ9NX55 129 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 ZFYVE27Q5T4F4 411 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 GKAP1Q5VSY0 366 aaPredicted RBP7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 BTN2A1Q7KYR7 527 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 ITPRIPQ8IWB1 547 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 CFAP45Q9UL16 551 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 PLIN1O60240 522 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 MECOMQ03112 1051 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 SRLQ86TD4 932 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 SPDL1Q96EA4 605 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 TSPAN18Q96SJ8 248 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 MAPKBP1O60336 1514 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 ZNF518AQ6AHZ1 1483 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 K7ELQ4 463 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms