RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
LSM8-201ENST00000249299 TNS1Q9HBL0 1735 aaKnown RBP16.21■□□□□ 0.19
LSM8-201ENST00000249299 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
LSM8-201ENST00000249299 KCNQ4P56696 695 aa16.2■□□□□ 0.18
LSM8-201ENST00000249299 CWF19L2Q2TBE0 894 aaKnown RBP16.2■□□□□ 0.18
LSM8-201ENST00000249299 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
LSM8-201ENST00000249299 ZNF34Q8IZ26 560 aa16.2■□□□□ 0.18
LSM8-201ENST00000249299 TBC1D2BQ9UPU7 963 aa16.2■□□□□ 0.18
LSM8-201ENST00000249299 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
LSM8-201ENST00000249299 H7C1W4 665 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 ZPR1O75312 459 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 HMMRO75330 724 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 MTX1Q13505 466 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 TAF1LQ8IZX4 1826 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 ANKRD44Q8N8A2 993 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
LSM8-201ENST00000249299 ARXQ96QS3 562 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 PCCAP05165 728 aaPredicted RBP16.19■□□□□ 0.18
LSM8-201ENST00000249299 RFC4P35249 363 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 HLFQ16534 295 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 NLRP10Q86W26 655 aa16.19■□□□□ 0.18
LSM8-201ENST00000249299 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
LSM8-201ENST00000249299 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
LSM8-201ENST00000249299 ATP5J2-PTCD1G3V325 749 aa16.18■□□□□ 0.18
LSM8-201ENST00000249299 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
LSM8-201ENST00000249299 B4GALNT3Q6L9W6 998 aa16.18■□□□□ 0.18
LSM8-201ENST00000249299 CEP85Q6P2H3 762 aa16.18■□□□□ 0.18
LSM8-201ENST00000249299 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
LSM8-201ENST00000249299 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
LSM8-201ENST00000249299 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
LSM8-201ENST00000249299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
LSM8-201ENST00000249299 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
LSM8-201ENST00000249299 CASP7P55210 303 aa16.17■□□□□ 0.18
LSM8-201ENST00000249299 ATP8B2P98198 1209 aa16.17■□□□□ 0.18
LSM8-201ENST00000249299 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
LSM8-201ENST00000249299 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
LSM8-201ENST00000249299 GCC1Q96CN9 775 aa16.16■□□□□ 0.18
LSM8-201ENST00000249299 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
LSM8-201ENST00000249299 EN1Q05925 392 aaPredicted RBP16.15■□□□□ 0.18
LSM8-201ENST00000249299 RABL6Q3YEC7 729 aaPredicted RBP16.15■□□□□ 0.18
LSM8-201ENST00000249299 SMC5Q8IY18 1101 aa16.15■□□□□ 0.18
LSM8-201ENST00000249299 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
LSM8-201ENST00000249299 EZH2Q15910 746 aaKnown RBP16.14■□□□□ 0.17
LSM8-201ENST00000249299 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
LSM8-201ENST00000249299 SIRT2Q8IXJ6 389 aa16.14■□□□□ 0.17
LSM8-201ENST00000249299 SSH3Q8TE77 659 aa16.14■□□□□ 0.17
LSM8-201ENST00000249299 UTP14AQ9BVJ6 771 aaKnown RBP16.14■□□□□ 0.17
LSM8-201ENST00000249299 NYXQ9GZU5 481 aa16.14■□□□□ 0.17
LSM8-201ENST00000249299 BCL2L12Q9HB09 334 aa16.14■□□□□ 0.17
LSM8-201ENST00000249299 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
LSM8-201ENST00000249299 IGHDP01880 384 aa16.13■□□□□ 0.17
LSM8-201ENST00000249299 UBE3BQ7Z3V4 1068 aa16.13■□□□□ 0.17
LSM8-201ENST00000249299 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
LSM8-201ENST00000249299 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
LSM8-201ENST00000249299 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
LSM8-201ENST00000249299 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
LSM8-201ENST00000249299 SCN7AQ01118 1682 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 SH3TC1Q8TE82 1336 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 SLC15A2Q16348 729 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 NLGN1Q8N2Q7 840 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 KAZALD1Q96I82 304 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 SUCLG2Q96I99 432 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 DCTPP1Q9H773 170 aa16.12■□□□□ 0.17
LSM8-201ENST00000249299 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
LSM8-201ENST00000249299 UBR3Q6ZT12 1888 aa16.11■□□□□ 0.17
LSM8-201ENST00000249299 GPTP24298 496 aa16.11■□□□□ 0.17
LSM8-201ENST00000249299 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
LSM8-201ENST00000249299 HSP90AB4PQ58FF6 505 aa16.11■□□□□ 0.17
LSM8-201ENST00000249299 AMIGO3Q86WK7 504 aa16.11■□□□□ 0.17
LSM8-201ENST00000249299 PHF14O94880 888 aa16.1■□□□□ 0.17
LSM8-201ENST00000249299 NTSR2O95665 410 aa16.1■□□□□ 0.17
LSM8-201ENST00000249299 GYS1P13807 737 aa16.1■□□□□ 0.17
LSM8-201ENST00000249299 SLC10A5Q5PT55 438 aa16.1■□□□□ 0.17
LSM8-201ENST00000249299 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
LSM8-201ENST00000249299 BICC1Q9H694 974 aaKnown RBP16.1■□□□□ 0.17
LSM8-201ENST00000249299 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
LSM8-201ENST00000249299 ANKRD36CQ5JPF3 1778 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 SRGAP3O43295 1099 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 PDE8AO60658 829 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 CSF1RP07333 972 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 FOXO4P98177 505 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 TPTE2Q6XPS3 522 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 NOP58Q9Y2X3 529 aaKnown RBP16.09■□□□□ 0.17
LSM8-201ENST00000249299 CARMIL3Q8ND23 1372 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 NUP98P52948 1817 aa16.09■□□□□ 0.17
LSM8-201ENST00000249299 IRS4O14654 1257 aaPredicted RBP16.08■□□□□ 0.16
LSM8-201ENST00000249299 RAB11FIP3O75154 756 aa16.08■□□□□ 0.16
LSM8-201ENST00000249299 TM4SF1P30408 202 aa16.08■□□□□ 0.16
LSM8-201ENST00000249299 DEFB132Q7Z7B7 95 aa16.08■□□□□ 0.16
LSM8-201ENST00000249299 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.16
LSM8-201ENST00000249299 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
LSM8-201ENST00000249299 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
LSM8-201ENST00000249299 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
LSM8-201ENST00000249299 PNMA6EA0A0J9YXQ4 647 aa16.07■□□□□ 0.16
LSM8-201ENST00000249299 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms