RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
DDX39A-201ENST00000242776 GPTP24298 496 aa18.38■□□□□ 0.53
DDX39A-201ENST00000242776 LMOD1P29536 600 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-201ENST00000242776 EPS15P42566 896 aa18.38■□□□□ 0.53
DDX39A-201ENST00000242776 DDX21Q9NR30 783 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDX39A-201ENST00000242776 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
DDX39A-201ENST00000242776 TRAF5O00463 557 aa18.37■□□□□ 0.53
DDX39A-201ENST00000242776 MAP2K1Q02750 393 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-201ENST00000242776 CYP4F22Q6NT55 531 aa18.37■□□□□ 0.53
DDX39A-201ENST00000242776 TRPM7Q96QT4 1865 aa18.37■□□□□ 0.53
DDX39A-201ENST00000242776 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
DDX39A-201ENST00000242776 CCDC85CA6NKD9 419 aa18.36■□□□□ 0.53
DDX39A-201ENST00000242776 LARGE2Q8N3Y3 721 aa18.36■□□□□ 0.53
DDX39A-201ENST00000242776 RPGRQ92834 1020 aaKnown RBP18.36■□□□□ 0.53
DDX39A-201ENST00000242776 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
DDX39A-201ENST00000242776 CAPNS2Q96L46 248 aa18.35■□□□□ 0.53
DDX39A-201ENST00000242776 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
DDX39A-201ENST00000242776 MYL6BP14649 208 aa18.34■□□□□ 0.53
DDX39A-201ENST00000242776 PSMD1Q99460 953 aa18.34■□□□□ 0.53
DDX39A-201ENST00000242776 SCNN1DP51172 638 aa18.33■□□□□ 0.53
DDX39A-201ENST00000242776 TTLL7Q6ZT98 887 aa18.33■□□□□ 0.53
DDX39A-201ENST00000242776 BEGAINQ9BUH8 593 aa18.33■□□□□ 0.53
DDX39A-201ENST00000242776 NYXQ9GZU5 481 aa18.33■□□□□ 0.53
DDX39A-201ENST00000242776 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.53
DDX39A-201ENST00000242776 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.53
DDX39A-201ENST00000242776 SNED1Q8TER0 1413 aa18.33■□□□□ 0.52
DDX39A-201ENST00000242776 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
DDX39A-201ENST00000242776 AOC2O75106 756 aa18.32■□□□□ 0.52
DDX39A-201ENST00000242776 TAF7Q15545 349 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-201ENST00000242776 CRY2Q49AN0 593 aa18.32■□□□□ 0.52
DDX39A-201ENST00000242776 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
DDX39A-201ENST00000242776 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
DDX39A-201ENST00000242776 GPR101Q96P66 508 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-201ENST00000242776 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-201ENST00000242776 AOC3Q16853 763 aa18.31■□□□□ 0.52
DDX39A-201ENST00000242776 SUSD4Q5VX71 490 aa18.31■□□□□ 0.52
DDX39A-201ENST00000242776 CST9Q5W186 159 aa18.31■□□□□ 0.52
DDX39A-201ENST00000242776 C3orf67Q6ZVT6 689 aa18.31■□□□□ 0.52
DDX39A-201ENST00000242776 NIM1KQ8IY84 436 aa18.31■□□□□ 0.52
DDX39A-201ENST00000242776 MAP3K15Q6ZN16 1313 aa18.31■□□□□ 0.52
DDX39A-201ENST00000242776 PPIP5K2O43314 1243 aa18.3■□□□□ 0.52
DDX39A-201ENST00000242776 ECE1P42892 770 aa18.3■□□□□ 0.52
DDX39A-201ENST00000242776 RBM17Q96I25 401 aaKnown RBP18.3■□□□□ 0.52
DDX39A-201ENST00000242776 UBN2Q6ZU65 1347 aa18.3■□□□□ 0.52
DDX39A-201ENST00000242776 CASP8AP2Q9UKL3 1982 aa18.29■□□□□ 0.52
DDX39A-201ENST00000242776 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
DDX39A-201ENST00000242776 ZNF408Q9H9D4 720 aa18.29■□□□□ 0.52
DDX39A-201ENST00000242776 THSD7BQ9C0I4 1608 aa18.29■□□□□ 0.52
DDX39A-201ENST00000242776 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
DDX39A-201ENST00000242776 CC2D2BQ6DHV5 1058 aa18.28■□□□□ 0.52
DDX39A-201ENST00000242776 THUMPD2Q9BTF0 503 aaKnown RBP18.28■□□□□ 0.52
DDX39A-201ENST00000242776 RGL2O15211 777 aa18.27■□□□□ 0.52
DDX39A-201ENST00000242776 USP50Q70EL3 339 aaPredicted RBP18.27■□□□□ 0.52
DDX39A-201ENST00000242776 ERVV-1B6SEH8 477 aa18.26■□□□□ 0.51
DDX39A-201ENST00000242776 CELF2O95319 508 aaKnown RBP18.26■□□□□ 0.51
DDX39A-201ENST00000242776 TLL2Q9Y6L7 1015 aa18.26■□□□□ 0.51
DDX39A-201ENST00000242776 ZNF316A6NFI3 1004 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-201ENST00000242776 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
DDX39A-201ENST00000242776 HOXA10P31260 410 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-201ENST00000242776 MLLT1Q03111 559 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-201ENST00000242776 CRAMP1Q96RY5 1269 aa18.26■□□□□ 0.51
DDX39A-201ENST00000242776 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-201ENST00000242776 TMX4Q9H1E5 349 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-201ENST00000242776 SLC34A2O95436 690 aa18.25■□□□□ 0.51
DDX39A-201ENST00000242776 NTSR2O95665 410 aa18.25■□□□□ 0.51
DDX39A-201ENST00000242776 ZNF428Q96B54 188 aa18.25■□□□□ 0.51
DDX39A-201ENST00000242776 GPRC5DQ9NZD1 345 aa18.25■□□□□ 0.51
DDX39A-201ENST00000242776 TAF1P21675 1872 aa18.24■□□□□ 0.51
DDX39A-201ENST00000242776 GMPSP49915 693 aaPredicted RBP18.24■□□□□ 0.51
DDX39A-201ENST00000242776 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
DDX39A-201ENST00000242776 ADARB2Q9NS39 739 aaKnown RBP18.24■□□□□ 0.51
DDX39A-201ENST00000242776 RIC1Q4ADV7 1423 aa18.24■□□□□ 0.51
DDX39A-201ENST00000242776 CXCL9Q07325 125 aa18.23■□□□□ 0.51
DDX39A-201ENST00000242776 ZNF34Q8IZ26 560 aa18.23■□□□□ 0.51
DDX39A-201ENST00000242776 LAMB2P55268 1798 aa18.23■□□□□ 0.51
DDX39A-201ENST00000242776 RAD17O75943 681 aa18.22■□□□□ 0.51
DDX39A-201ENST00000242776 NEFMP07197 916 aa18.22■□□□□ 0.51
DDX39A-201ENST00000242776 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
DDX39A-201ENST00000242776 NLRP3Q96P20 1036 aa18.22■□□□□ 0.51
DDX39A-201ENST00000242776 BCL2L13Q9BXK5 485 aa18.22■□□□□ 0.51
DDX39A-201ENST00000242776 SHTN1A0MZ66 631 aa18.21■□□□□ 0.51
DDX39A-201ENST00000242776 ANXA1P04083 346 aa18.21■□□□□ 0.51
DDX39A-201ENST00000242776 EIF2S2P20042 333 aaKnown RBP18.21■□□□□ 0.51
DDX39A-201ENST00000242776 GRIPAP1Q4V328 841 aa18.21■□□□□ 0.51
DDX39A-201ENST00000242776 SAPCD2Q86UD0 394 aa18.21■□□□□ 0.51
DDX39A-201ENST00000242776 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.51
DDX39A-201ENST00000242776 MCOLN1Q9GZU1 580 aa18.21■□□□□ 0.51
DDX39A-201ENST00000242776 ZNRF3Q9ULT6 936 aa18.21■□□□□ 0.51
DDX39A-201ENST00000242776 ABCC4O15439 1325 aa18.21■□□□□ 0.51
DDX39A-201ENST00000242776 DLK2Q6UY11 383 aa18.2■□□□□ 0.5
DDX39A-201ENST00000242776 DPP8Q6V1X1 898 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-201ENST00000242776 GIGYF2Q6Y7W6 1299 aaKnown RBP18.2■□□□□ 0.5
DDX39A-201ENST00000242776 ATP6V0A2Q9Y487 856 aa18.2■□□□□ 0.5
DDX39A-201ENST00000242776 IBTKQ9P2D0 1353 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-201ENST00000242776 MAP2K2P36507 400 aa18.2■□□□□ 0.5
DDX39A-201ENST00000242776 CIAPIN1Q6FI81 312 aa18.2■□□□□ 0.5
DDX39A-201ENST00000242776 TRPM4Q8TD43 1214 aa18.2■□□□□ 0.5
DDX39A-201ENST00000242776 NECTIN2Q92692 538 aa18.2■□□□□ 0.5
DDX39A-201ENST00000242776 UTP14AQ9BVJ6 771 aaKnown RBP18.2■□□□□ 0.5
DDX39A-201ENST00000242776 HCLS1P14317 486 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms