RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 DNAJC10Q8IXB1 793 aa30.16■■■□□ 2.42
RUNDC3A-201ENST00000225441 TRIM44Q96DX7 344 aaPredicted RBP30.15■■■□□ 2.42
RUNDC3A-201ENST00000225441 SLC4A9Q96Q91 983 aa30.15■■■□□ 2.42
RUNDC3A-201ENST00000225441 ANO8Q9HCE9 1232 aaPredicted RBP30.15■■■□□ 2.42
RUNDC3A-201ENST00000225441 NHSQ6T4R5 1651 aa30.15■■■□□ 2.42
RUNDC3A-201ENST00000225441 FAM182BQ5T319 152 aa30.15■■■□□ 2.42
RUNDC3A-201ENST00000225441 ZGPATQ8N5A5 531 aaKnown RBP30.15■■■□□ 2.42
RUNDC3A-201ENST00000225441 RILPL2Q969X0 211 aa30.15■■■□□ 2.42
RUNDC3A-201ENST00000225441 USP42Q9H9J4 1324 aaKnown RBP30.14■■■□□ 2.42
RUNDC3A-201ENST00000225441 ADCY9O60503 1353 aa30.14■■■□□ 2.42
RUNDC3A-201ENST00000225441 PPP1R42Q7Z4L9 355 aa30.14■■■□□ 2.42
RUNDC3A-201ENST00000225441 ZDHHC9Q9Y397 364 aa30.14■■■□□ 2.42
RUNDC3A-201ENST00000225441 PI4KAP2A4QPH2 592 aa30.13■■■□□ 2.41
RUNDC3A-201ENST00000225441 PIP4K2AP48426 406 aaPredicted RBP30.13■■■□□ 2.41
RUNDC3A-201ENST00000225441 PI4KAP1Q8N8J0 262 aa30.13■■■□□ 2.41
RUNDC3A-201ENST00000225441 DNAAF4Q8WXU2 420 aa30.13■■■□□ 2.41
RUNDC3A-201ENST00000225441 ANO2Q9NQ90 1003 aa30.13■■■□□ 2.41
RUNDC3A-201ENST00000225441 NBPF26B4DH59 902 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 BEND3Q5T5X7 828 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 NBPF14Q5TI25 921 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 NBPF10Q6P3W6 841 aaKnown RBP30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 NBPF15Q8N660 670 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 SMARCC1Q92922 1105 aaPredicted RBP30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 TJP1Q07157 1748 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 ESPNB1AK53 854 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 DDX58O95786 925 aaKnown RBP30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 MBD3O95983 291 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 A1BGP04217 495 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 NASPP49321 788 aaPredicted RBP30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 MTX1Q13505 466 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 RHPN1Q8TCX5 695 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 XAGE3Q8WTP9 111 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 PALLDQ8WX93 1383 aa30.12■■■□□ 2.41
RUNDC3A-201ENST00000225441 AIMP1Q12904 312 aaKnown RBP30.11■■■□□ 2.41
RUNDC3A-201ENST00000225441 KSR2Q6VAB6 950 aa30.11■■■□□ 2.41
RUNDC3A-201ENST00000225441 AK9Q5TCS8 1911 aa30.11■■■□□ 2.41
RUNDC3A-201ENST00000225441 SURF6O75683 361 aaKnown RBP30.1■■■□□ 2.41
RUNDC3A-201ENST00000225441 BRD1O95696 1058 aa30.1■■■□□ 2.41
RUNDC3A-201ENST00000225441 STARD3NLO95772 234 aa30.1■■■□□ 2.41
RUNDC3A-201ENST00000225441 HSPA4P34932 840 aa30.1■■■□□ 2.41
RUNDC3A-201ENST00000225441 TTC41PQ6P2S7 1318 aa30.1■■■□□ 2.41
RUNDC3A-201ENST00000225441 ALDH1L1O75891 902 aa30.1■■■□□ 2.41
RUNDC3A-201ENST00000225441 COPS6Q7L5N1 327 aa30.1■■■□□ 2.41
RUNDC3A-201ENST00000225441 BRWD3Q6RI45 1802 aa30.09■■■□□ 2.41
RUNDC3A-201ENST00000225441 PKP1Q13835 747 aa30.08■■■□□ 2.41
RUNDC3A-201ENST00000225441 ZSCAN23Q3MJ62 389 aa30.08■■■□□ 2.41
RUNDC3A-201ENST00000225441 MAP3K2Q9Y2U5 619 aa30.08■■■□□ 2.41
RUNDC3A-201ENST00000225441 CICQ96RK0 1608 aaPredicted RBP30.08■■■□□ 2.41
RUNDC3A-201ENST00000225441 CNTROBQ8N137 903 aa30.08■■■□□ 2.41
RUNDC3A-201ENST00000225441 LOC102724428A0A0B4J2F2 783 aa30.07■■■□□ 2.4
RUNDC3A-201ENST00000225441 CYP19A1P11511 503 aaPredicted RBP30.07■■■□□ 2.4
RUNDC3A-201ENST00000225441 SIK1P57059 783 aa30.07■■■□□ 2.4
RUNDC3A-201ENST00000225441 TSHZ3Q63HK5 1081 aa30.07■■■□□ 2.4
RUNDC3A-201ENST00000225441 PTF1AQ7RTS3 328 aa30.07■■■□□ 2.4
RUNDC3A-201ENST00000225441 KRT27Q7Z3Y8 459 aa30.07■■■□□ 2.4
RUNDC3A-201ENST00000225441 PI4K2BQ8TCG2 481 aa30.07■■■□□ 2.4
RUNDC3A-201ENST00000225441 SRGAP3O43295 1099 aa30.06■■■□□ 2.4
RUNDC3A-201ENST00000225441 BTAF1O14981 1849 aa30.06■■■□□ 2.4
RUNDC3A-201ENST00000225441 SBF2Q86WG5 1849 aa30.06■■■□□ 2.4
RUNDC3A-201ENST00000225441 HS1BP3Q53T59 392 aa30.06■■■□□ 2.4
RUNDC3A-201ENST00000225441 PALD1Q9ULE6 856 aa30.06■■■□□ 2.4
RUNDC3A-201ENST00000225441 PRPF40AO75400 957 aaKnown RBP30.05■■■□□ 2.4
RUNDC3A-201ENST00000225441 CAVIN1Q6NZI2 390 aaKnown RBP30.05■■■□□ 2.4
RUNDC3A-201ENST00000225441 RAD50Q92878 1312 aa30.04■■■□□ 2.4
RUNDC3A-201ENST00000225441 SGSM2O43147 1006 aa30.04■■■□□ 2.4
RUNDC3A-201ENST00000225441 ERC1Q8IUD2 1116 aa30.04■■■□□ 2.4
RUNDC3A-201ENST00000225441 RXRBP28702 533 aa30.03■■■□□ 2.4
RUNDC3A-201ENST00000225441 ATP6V1AP38606 617 aa30.03■■■□□ 2.4
RUNDC3A-201ENST00000225441 RIC3Q7Z5B4 369 aa30.03■■■□□ 2.4
RUNDC3A-201ENST00000225441 ANKRD13DQ6ZTN6 518 aa30.03■■■□□ 2.4
RUNDC3A-201ENST00000225441 IL1RAPL2Q9NP60 686 aa30.03■■■□□ 2.4
RUNDC3A-201ENST00000225441 RGS17Q9UGC6 210 aaPredicted RBP30.03■■■□□ 2.4
RUNDC3A-201ENST00000225441 ZNF831Q5JPB2 1677 aa30.03■■■□□ 2.4
RUNDC3A-201ENST00000225441 GLRX3O76003 335 aaKnown RBP30.02■■■□□ 2.4
RUNDC3A-201ENST00000225441 NCLP19338 710 aaKnown RBP30.01■■■□□ 2.39
RUNDC3A-201ENST00000225441 FAM196AQ6ZSG2 479 aa30.01■■■□□ 2.39
RUNDC3A-201ENST00000225441 NUTM1Q86Y26 1132 aa30.01■■■□□ 2.39
RUNDC3A-201ENST00000225441 KLHL34Q8N239 644 aa30.01■■■□□ 2.39
RUNDC3A-201ENST00000225441 RUFY2Q8WXA3 655 aa30.01■■■□□ 2.39
RUNDC3A-201ENST00000225441 NBPF7P0C2Y1 421 aaPredicted RBP30■■■□□ 2.39
RUNDC3A-201ENST00000225441 ITPK1Q13572 414 aa30■■■□□ 2.39
RUNDC3A-201ENST00000225441 PLBD2Q8NHP8 589 aa30■■■□□ 2.39
RUNDC3A-201ENST00000225441 GPT2Q8TD30 523 aa30■■■□□ 2.39
RUNDC3A-201ENST00000225441 WDR33Q9C0J8 1336 aaKnown RBP29.99■■■□□ 2.39
RUNDC3A-201ENST00000225441 TTLL7Q6ZT98 887 aa29.99■■■□□ 2.39
RUNDC3A-201ENST00000225441 LINS1Q8NG48 757 aa29.99■■■□□ 2.39
RUNDC3A-201ENST00000225441 GPATCH3Q96I76 525 aa29.99■■■□□ 2.39
RUNDC3A-201ENST00000225441 ARFGEF2Q9Y6D5 1785 aa29.98■■■□□ 2.39
RUNDC3A-201ENST00000225441 KIAA1211Q6ZU35 1233 aa29.98■■■□□ 2.39
RUNDC3A-201ENST00000225441 SYAP1Q96A49 352 aaPredicted RBP29.98■■■□□ 2.39
RUNDC3A-201ENST00000225441 METTL22Q9BUU2 404 aaPredicted RBP29.98■■■□□ 2.39
RUNDC3A-201ENST00000225441 BCL11BQ9C0K0 894 aaPredicted RBP29.98■■■□□ 2.39
RUNDC3A-201ENST00000225441 ZBTB1Q9Y2K1 713 aa29.98■■■□□ 2.39
RUNDC3A-201ENST00000225441 LRSAM1Q6UWE0 723 aa29.97■■■□□ 2.39
RUNDC3A-201ENST00000225441 CLASRPQ8N2M8 674 aaKnown RBP29.96■■■□□ 2.39
RUNDC3A-201ENST00000225441 LSG1Q9H089 658 aaKnown RBP29.96■■■□□ 2.39
RUNDC3A-201ENST00000225441 NEXNQ0ZGT2 675 aa29.96■■■□□ 2.39
RUNDC3A-201ENST00000225441 RREB1Q92766 1687 aa29.96■■■□□ 2.39
RUNDC3A-201ENST00000225441 POTEAQ6S8J7 498 aa29.95■■■□□ 2.39
RUNDC3A-201ENST00000225441 CCDC87Q9NVE4 849 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms