RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 TMX1Q9H3N1 280 aa19.84■□□□□ 0.77
CTDP1-201ENST00000075430 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
CTDP1-201ENST00000075430 BLOC1S2Q6QNY1 142 aa19.84■□□□□ 0.77
CTDP1-201ENST00000075430 DNAJC2Q99543 621 aaKnown RBP19.84■□□□□ 0.77
CTDP1-201ENST00000075430 USP27XA6NNY8 438 aa19.83■□□□□ 0.77
CTDP1-201ENST00000075430 FAM177A1Q8N128 213 aaPredicted RBP19.83■□□□□ 0.77
CTDP1-201ENST00000075430 CACTINQ8WUQ7 758 aaKnown RBP19.83■□□□□ 0.77
CTDP1-201ENST00000075430 RUFY2Q8WXA3 655 aa19.83■□□□□ 0.77
CTDP1-201ENST00000075430 CLTCQ00610 1675 aaKnown RBP19.83■□□□□ 0.77
CTDP1-201ENST00000075430 CPSF1Q10570 1443 aaKnown RBP19.83■□□□□ 0.76
CTDP1-201ENST00000075430 CCT2P78371 535 aaKnown RBP19.82■□□□□ 0.76
CTDP1-201ENST00000075430 CHST3Q7LGC8 479 aa19.82■□□□□ 0.76
CTDP1-201ENST00000075430 TTC14Q96N46 770 aa19.82■□□□□ 0.76
CTDP1-201ENST00000075430 BIN1O00499 593 aa19.82■□□□□ 0.76
CTDP1-201ENST00000075430 CCDC144BQ3MJ40 725 aa19.82■□□□□ 0.76
CTDP1-201ENST00000075430 CCDC129Q6ZRS4 1044 aa19.82■□□□□ 0.76
CTDP1-201ENST00000075430 CCDC144CPQ8IYA2 1237 aa19.82■□□□□ 0.76
CTDP1-201ENST00000075430 ST7Q9NRC1 585 aa19.82■□□□□ 0.76
CTDP1-201ENST00000075430 TLR7Q9NYK1 1049 aaKnown RBP19.81■□□□□ 0.76
CTDP1-201ENST00000075430 PLEKHG3A1L390 1219 aa19.81■□□□□ 0.76
CTDP1-201ENST00000075430 NCBP1Q09161 790 aaKnown RBP19.81■□□□□ 0.76
CTDP1-201ENST00000075430 CREB3L3Q68CJ9 461 aa19.81■□□□□ 0.76
CTDP1-201ENST00000075430 SALL3Q9BXA9 1300 aa19.81■□□□□ 0.76
CTDP1-201ENST00000075430 PRAMEF22A3QJZ6 481 aa19.81■□□□□ 0.76
CTDP1-201ENST00000075430 SLFNL1Q499Z3 407 aa19.81■□□□□ 0.76
CTDP1-201ENST00000075430 GLRX3O76003 335 aaKnown RBP19.8■□□□□ 0.76
CTDP1-201ENST00000075430 ZNF530Q6P9A1 599 aaPredicted RBP19.8■□□□□ 0.76
CTDP1-201ENST00000075430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.8■□□□□ 0.76
CTDP1-201ENST00000075430 AATKQ6ZMQ8 1374 aa19.8■□□□□ 0.76
CTDP1-201ENST00000075430 DNAAF4Q8WXU2 420 aa19.8■□□□□ 0.76
CTDP1-201ENST00000075430 STAP2Q9UGK3 403 aa19.8■□□□□ 0.76
CTDP1-201ENST00000075430 MYL6BP14649 208 aa19.79■□□□□ 0.76
CTDP1-201ENST00000075430 ZSCAN25Q6NSZ9 544 aa19.79■□□□□ 0.76
CTDP1-201ENST00000075430 HOXC9P31274 260 aa19.79■□□□□ 0.76
CTDP1-201ENST00000075430 ST3GAL1Q11201 340 aa19.79■□□□□ 0.76
CTDP1-201ENST00000075430 ECHDC1Q9NTX5 307 aa19.79■□□□□ 0.76
CTDP1-201ENST00000075430 G3BP1Q13283 466 aaKnown RBP eCLIP19.79■□□□□ 0.76
CTDP1-201ENST00000075430 HSP90AA4PQ58FG1 418 aa19.79■□□□□ 0.76
CTDP1-201ENST00000075430 SSH3Q8TE77 659 aa19.79■□□□□ 0.76
CTDP1-201ENST00000075430 BRF1Q92994 677 aa19.79■□□□□ 0.76
CTDP1-201ENST00000075430 A0A0D9SFI3 127 aa19.78■□□□□ 0.76
CTDP1-201ENST00000075430 ZC3H6P61129 1189 aaKnown RBP19.78■□□□□ 0.76
CTDP1-201ENST00000075430 ZRSR1Q15695 479 aaKnown RBP19.78■□□□□ 0.76
CTDP1-201ENST00000075430 RICTORQ6R327 1708 aa19.78■□□□□ 0.76
CTDP1-201ENST00000075430 CEP135Q66GS9 1140 aa19.78■□□□□ 0.76
CTDP1-201ENST00000075430 SEC62Q99442 399 aaKnown RBP19.78■□□□□ 0.76
CTDP1-201ENST00000075430 ZNF215Q9UL58 517 aaPredicted RBP19.78■□□□□ 0.76
CTDP1-201ENST00000075430 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
CTDP1-201ENST00000075430 CDK12Q9NYV4 1490 aaPredicted RBP19.78■□□□□ 0.76
CTDP1-201ENST00000075430 KIF24Q5T7B8 1368 aa19.78■□□□□ 0.76
CTDP1-201ENST00000075430 GPATCH3Q96I76 525 aa19.77■□□□□ 0.76
CTDP1-201ENST00000075430 SPTLC3Q9NUV7 552 aa19.77■□□□□ 0.76
CTDP1-201ENST00000075430 PHF8Q9UPP1 1060 aa19.77■□□□□ 0.76
CTDP1-201ENST00000075430 SETD1BQ9UPS6 1966 aaKnown RBP19.77■□□□□ 0.76
CTDP1-201ENST00000075430 FLT4P35916 1363 aa19.77■□□□□ 0.76
CTDP1-201ENST00000075430 SKILP12757 684 aa19.77■□□□□ 0.75
CTDP1-201ENST00000075430 ZNF75DP51815 510 aa19.77■□□□□ 0.75
CTDP1-201ENST00000075430 ELF2Q15723 593 aa19.77■□□□□ 0.75
CTDP1-201ENST00000075430 BBXQ8WY36 941 aaPredicted RBP19.77■□□□□ 0.75
CTDP1-201ENST00000075430 ZFP91Q96JP5 570 aaPredicted RBP19.77■□□□□ 0.75
CTDP1-201ENST00000075430 KIAA0232Q92628 1395 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 PROSER3Q2NL68 480 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 FUCA2Q9BTY2 467 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 LEO1Q8WVC0 666 aaPredicted RBP19.76■□□□□ 0.75
CTDP1-201ENST00000075430 SDF4Q9BRK5 362 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 SMC2O95347 1197 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 CSB-PGBD3P0DP91 1061 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 ME1P48163 572 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 OTUD7BQ6GQQ9 843 aa19.76■□□□□ 0.75
CTDP1-201ENST00000075430 PTPN14Q15678 1187 aa19.75■□□□□ 0.75
CTDP1-201ENST00000075430 C1orf141Q5JVX7 400 aa19.75■□□□□ 0.75
CTDP1-201ENST00000075430 C11orf57Q6ZUT1 292 aaPredicted RBP19.75■□□□□ 0.75
CTDP1-201ENST00000075430 NCOA5Q9HCD5 579 aaKnown RBP19.75■□□□□ 0.75
CTDP1-201ENST00000075430 CDK11BP21127 795 aaKnown RBP19.75■□□□□ 0.75
CTDP1-201ENST00000075430 ZNF589Q86UQ0 364 aaPredicted RBP19.75■□□□□ 0.75
CTDP1-201ENST00000075430 GTF3C6Q969F1 213 aa19.75■□□□□ 0.75
CTDP1-201ENST00000075430 USP6P35125 1406 aa19.75■□□□□ 0.75
CTDP1-201ENST00000075430 HOMER1Q86YM7 354 aa19.75■□□□□ 0.75
CTDP1-201ENST00000075430 CCDC171Q6TFL3 1326 aa19.75■□□□□ 0.75
CTDP1-201ENST00000075430 SLC27A2O14975 620 aa19.74■□□□□ 0.75
CTDP1-201ENST00000075430 BTBD11A6QL63 1104 aa19.74■□□□□ 0.75
CTDP1-201ENST00000075430 VPS53Q5VIR6 699 aa19.74■□□□□ 0.75
CTDP1-201ENST00000075430 EAF2Q96CJ1 260 aaPredicted RBP19.73■□□□□ 0.75
CTDP1-201ENST00000075430 PGBD1Q96JS3 809 aa19.73■□□□□ 0.75
CTDP1-201ENST00000075430 NBPF6Q5VWK0 638 aa19.73■□□□□ 0.75
CTDP1-201ENST00000075430 ZSCAN31Q96LW9 406 aaPredicted RBP19.73■□□□□ 0.75
CTDP1-201ENST00000075430 NBPF4Q96M43 638 aa19.73■□□□□ 0.75
CTDP1-201ENST00000075430 POLR3GO15318 223 aaPredicted RBP19.72■□□□□ 0.75
CTDP1-201ENST00000075430 DDX46Q7L014 1031 aaKnown RBP19.72■□□□□ 0.75
CTDP1-201ENST00000075430 SH2B1Q9NRF2 756 aaPredicted RBP19.72■□□□□ 0.75
CTDP1-201ENST00000075430 SF3A1Q15459 793 aaKnown RBP19.72■□□□□ 0.75
CTDP1-201ENST00000075430 CCAR2Q8N163 923 aaKnown RBP19.72■□□□□ 0.75
CTDP1-201ENST00000075430 AOPEPQ8N6M6 819 aa19.72■□□□□ 0.75
CTDP1-201ENST00000075430 NEUROD6Q96NK8 337 aa19.72■□□□□ 0.75
CTDP1-201ENST00000075430 CRB1P82279 1406 aa19.72■□□□□ 0.75
CTDP1-201ENST00000075430 CCAR1Q8IX12 1150 aaKnown RBP19.72■□□□□ 0.75
CTDP1-201ENST00000075430 TMEM87AQ8NBN3 555 aa19.72■□□□□ 0.75
CTDP1-201ENST00000075430 CCDC69A6NI79 296 aa19.71■□□□□ 0.75
CTDP1-201ENST00000075430 POLR3DP05423 398 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms