RNA–Protein interactions for RNA: ENSMUST00000222028.1

Ptpdc1-204, Transcript of Protein tyrosine phosphatase domain-containing protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ptpdc1, Length 3,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1-204ENSMUST00000222028 Ddx27Q921N6 760 aaKnown RBP20.21■□□□□ 0.83
Ptpdc1-204ENSMUST00000222028 Ctdnep1Q3TP92 244 aa20.21■□□□□ 0.83
Ptpdc1-204ENSMUST00000222028 Bin1O08539 588 aaKnown RBP20.2■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Gtpbp4Q99ME9 634 aaKnown RBP20.2■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Foxp4Q9DBY0 795 aaKnown RBP20.2■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Fam228bQ497Q6 232 aa20.2■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Taf5lQ91WQ5 589 aa20.2■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Ercc3P49135 783 aa20.2■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Prdm4Q80V63 803 aa20.2■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Tsen34Q8BMZ5 316 aa20.2■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Yeats2Q3TUF7 1407 aa20.19■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Neurod6P48986 337 aa20.19■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Cct2P80314 535 aaKnown RBP20.19■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 MlecQ6ZQI3 291 aaKnown RBP20.19■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Ccer1Q9CQL2 403 aa20.19■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 NktrP30415 1453 aa20.19■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Kcnk13Q8R1P5 405 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Rbm33Q9CXK9 1231 aaKnown RBP20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Akap12Q9WTQ5 1684 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Spef2Q8C9J3 1734 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Znf532Q6NXK2 1036 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 R3hcc1Q8BSI6 488 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Tpm1P58771 284 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Arhgef1Q61210 920 aaKnown RBP20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Dnaaf2Q8BPI1 814 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Zbtb3Q91X45 518 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Srgap1Q91Z69 1062 aa20.18■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Znf568E9PYI1 671 aa20.17■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Atp2b1G5E829 1220 aa20.17■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Psma5Q9Z2U1 241 aaKnown RBP20.17■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Arhgef28P97433 1693 aa20.17■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Usp28Q5I043 1051 aa20.17■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Dennd6aQ8BH65 605 aa20.17■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 AcrbpQ3V140 540 aa20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Zkscan4Q5SZT6 480 aa20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Igsf3Q6ZQA6 1194 aa20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Ano10Q8BH79 659 aa20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Odf2lQ9D478 642 aa20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Atf7Q8R0S1 413 aa20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Osbpl5Q9ER64 874 aa20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Hoxb7P09024 217 aa20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Pes1Q9EQ61 584 aaKnown RBP20.16■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 AceP09470 1312 aa20.15■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Rnf20Q5DTM8 973 aa20.15■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Zfp317Q8C0Q5 607 aa20.15■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Mcm6P97311 821 aa20.14■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Ubxn4Q8VCH8 506 aa20.14■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Mrvi1Q9WUX5 899 aaKnown RBP20.14■□□□□ 0.82
Ptpdc1-204ENSMUST00000222028 Znf326O88291 580 aa20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Rtel1Q0VGM9 1203 aa20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Map3k2Q61083 619 aa20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Bag3Q9JLV1 577 aaKnown RBP20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Aox4Q3TYQ9 1336 aa20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Prr29B1ARI9 187 aa20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Wdr3Q8BHB4 942 aaKnown RBP20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Pnpla2Q8BJ56 486 aa20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Rps6kb1Q8BSK8 525 aa20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Golph3lQ8R088 285 aaKnown RBP20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Snw1Q9CSN1 536 aaKnown RBP20.14■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Tbc1d4Q8BYJ6 1307 aa20.13■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Vps18Q8R307 973 aa20.13■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Stat1P42225 749 aa20.13■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Paxbp1P58501 919 aa20.13■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Bend3Q6PAL0 825 aa20.13■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Prdm2A2A7B5 1709 aaKnown RBP20.12■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Chd4Q6PDQ2 1915 aaKnown RBP20.12■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Irgm2A0A140LIF8 407 aa20.12■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Atf5O70191 283 aa20.12■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Csrnp1P59054 583 aa20.12■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Sp8Q8BMJ8 486 aa20.12■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Dip2aQ8BWT5 1523 aa20.12■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Ppp1r18Q8BQ30 594 aa20.11■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Mical1Q8VDP3 1048 aa20.11■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Actn3O88990 900 aaKnown RBP20.11■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Atp8b3Q6UQ17 1335 aa20.11■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Capn2O08529 700 aa20.11■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Trim25Q61510 634 aaKnown RBP20.11■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Dmrt2Q8BG36 561 aa20.11■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Qser1A2BIE1 1698 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Ahdc1Q6PAL7 1594 aaKnown RBP20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Stx1aO35526 288 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 CtcfQ61164 736 aaKnown RBP20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Drc7Q6V3W6 876 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Amotl2Q8K371 772 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Dusp10Q9ESS0 483 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Kcnb2A6H8H5 907 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Gpatch3Q8BIY1 525 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Aox1O54754 1333 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Msh6P54276 1358 aaKnown RBP20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Parp14Q2EMV9 1817 aa20.1■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Dnajc25A2ALW5 357 aa20.09■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Ccdc102aQ3TMW1 549 aa20.09■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Spag5Q7TME2 1165 aa20.09■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Q8C5K5 320 aa20.09■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 AglF8VPN4 1532 aa20.09■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Surf1P09925 306 aa20.09■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Bmp2kQ91Z96 1138 aa20.09■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 FancaQ9JL70 1439 aa20.09■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 Klhl34A2AI76 644 aa20.08■□□□□ 0.81
Ptpdc1-204ENSMUST00000222028 1700006A11RikB9EHI3 544 aa20.08■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms