RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Cdca8Q8BHX3 289 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Rrs1Q9CYH6 365 aaKnown RBP9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Eps15P42567 897 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Bicd1Q8BR07 835 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Rufy3Q9D394 469 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Bloc1s2Q9CWG9 143 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Krt8P11679 490 aaKnown RBP9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Nup133Q8R0G9 1155 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Atp2b1G5E829 1220 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Tmem67Q8BR76 992 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Mrpl44Q9CY73 333 aaKnown RBP9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Srek1ip1Q4V9W2 153 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Mtmr3Q8K296 1196 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 EsrrbQ61539 433 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 HscbQ8K3A0 234 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Olr1Q9EQ09 363 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Golga5Q9QYE6 729 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 TmpoQ61033 693 aaKnown RBP9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Kif5aP33175 1027 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Sh3bp1P55194 680 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Ddx27Q921N6 760 aaKnown RBP9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Uchl5Q9WUP7 329 aa9.3□□□□□ -0.92
Spen-201ENSMUST00000078886 Grpel1Q99LP6 217 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Klf15Q9EPW2 415 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Bcar3Q9QZK2 820 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Clip2Q9Z0H8 1047 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Ndufab1Q9CR21 156 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 AticQ9CWJ9 592 aaKnown RBP9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 NapbP28663 298 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Tubb4bP68372 445 aaKnown RBP9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Zfp397Q7TNK4 527 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Pip4k2bQ80XI4 416 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Ano10Q8BH79 659 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Mybbp1aQ7TPV4 1344 aaKnown RBP9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Top1Q04750 767 aaKnown RBP9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Btbd11Q6GQW0 1109 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Plekhm2Q80TQ5 1018 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Ccdc114Q3UX62 658 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Cnga2Q62398 664 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Trim34aQ99PP6 485 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Rai14Q9EP71 979 aaKnown RBP9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Api5O35841 504 aaKnown RBP9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Tnnc1P19123 161 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Spats2Q8K1N4 545 aaKnown RBP9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Krt23Q99PS0 422 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Dapk3O54784 448 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Rnf216P58283 853 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Capza3P70190 299 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Fam114a2Q8VE88 497 aa9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 LlphQ9D945 130 aaKnown RBP9.29□□□□□ -0.92
Spen-201ENSMUST00000078886 Gm28919A0A087WP35 240 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Cog7Q3UM29 770 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Gm136Q3V037 328 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Zc4h2Q68FG0 224 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Polr3dQ91WD1 398 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Zscan29E9Q5B4 869 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Ampd3O08739 766 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Snx13Q6PHS6 957 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Proca1B0QZF7 307 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Fermt2Q8CIB5 680 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Nuf2Q99P69 463 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Diaph2O70566 1098 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Rab44Q8CB87 725 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Srgap1Q91Z69 1062 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Tekt2Q922G7 430 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Naip1Q9QWK5 1403 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Tnni2P13412 182 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Ccdc160Q3UYG1 323 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 SkiQ60698 725 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Lig3P97386 1015 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Klhl30Q8C3F7 581 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Samd15F6XZJ7 620 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Zfp651E9PZ11 729 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Speer4aF8VPX6 267 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 ZfaP23607 742 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Gas8Q60779 478 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Gimap6Q8K349 305 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 KdrP35918 1367 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Tbc1d2bQ3U0J8 965 aa9.28□□□□□ -0.92
Spen-201ENSMUST00000078886 Sycp2Q9CUU3 1500 aa9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Nap1l2P51860 460 aa9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Stim2P83093 746 aa9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Ift88Q61371 824 aa9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Ccdc25Q78PG9 208 aa9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Hmgb1P63158 215 aaKnown RBP9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Cacna2d4Q5RJF7 1116 aa9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Jph4Q80WT0 628 aa9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Atf7Q8R0S1 413 aa9.27□□□□□ -0.92
Spen-201ENSMUST00000078886 Tubb5P99024 444 aaKnown RBP9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Ttll12Q3UDE2 639 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Ctdp1Q7TSG2 960 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Dhx9O70133 1380 aaKnown RBP9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Tsr2Q8C8T8 191 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 LrgukQ9D5S7 820 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 PalmdQ9JHU2 551 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Hmg20bQ9Z104 317 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Tbc1d8Q9Z1A9 1134 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Lrsam1Q80ZI6 727 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Cep128Q8BI22 1102 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms