RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Sept6Q9R1T4 434 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Smarcc2Q6PDG5 1213 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Zfp597E9Q6S0 419 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Evi5lH3BKQ3 813 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Diaph1O08808 1255 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Eva1cP58659 440 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Akap8Q9DBR0 687 aaKnown RBP11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Zkscan16A2ALW2 728 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 AU019823E9PUQ3 292 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Zranb3Q6NZP1 1069 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Nol11Q8BJW5 723 aaKnown RBP11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Fgd6Q69ZL1 1399 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Capn2O08529 700 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Bmp2kQ91Z96 1138 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Yeats4Q9CR11 227 aaKnown RBP11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ssr1Q9CY50 286 aaKnown RBP11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Rufy3Q9D394 469 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Pde3aQ9Z0X4 1141 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Mcmdc2E9Q956 681 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Rsrc1Q9DBU6 334 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Gm14025A2AP89 1413 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 InsrP15208 1372 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 NapbP28663 298 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Sptlc2P97363 560 aaKnown RBP11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Mis12Q9CY25 206 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Echdc1Q9D9V3 322 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Egfl6Q9JJZ5 550 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Myo1bP46735 1107 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Gm21985Q6P6P5 1106 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Zscan25B2RX31 543 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Tshz1Q5DTH5 1084 aa11.6□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ggt6Q6PDE7 497 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Cc2d1bQ8BRN9 848 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 4930548H24RikQ9D496 437 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Tnnc1P19123 161 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ttc41Q692V3 1318 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ncbp1Q3UYV9 790 aaKnown RBP11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ttc27Q8CD92 847 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Mug2P28666 1451 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 1700006A11RikB9EHI3 544 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Erbb3Q61526 1339 aa11.59□□□□□ -0.55
Ubr1-201ENSMUST00000028728 EappQ5BU09 281 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ubn2Q80WC1 1314 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Trappc8E9PWG2 1437 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Zfp91Q62511 572 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Cplx4Q80WM3 160 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tti2Q8BGV4 512 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ttc19Q8CC21 365 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Synpo2Q91YE8 1087 aaKnown RBP11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 PpanQ91YU8 470 aaKnown RBP11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 SarnpQ9D1J3 210 aaKnown RBP11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Il1rapl2Q9ERS6 686 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Aox1O54754 1333 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Gm44503E9PYU5 387 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 E9QMW4 1145 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 U2af1l4Q8BGJ9 220 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 4930572O03RikQ8C5Y0 211 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Klhl10Q9D5V2 608 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Metap2O08663 478 aaKnown RBP11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Rrp1P56183 494 aaKnown RBP11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Luc7l2Q7TNC4 392 aaKnown RBP11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Rab3il1Q8VDV3 383 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tbc1d2bQ3U0J8 965 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 GpkowQ56A08 488 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 SfpqQ8VIJ6 699 aaKnown RBP11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Osbpl5Q9ER64 874 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Traf3ip1Q149C2 625 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Rrs1Q9CYH6 365 aaKnown RBP11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Znf287Q9EQB9 759 aa11.58□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ccdc157Q5SPX1 718 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tbc1d31Q6NXY1 996 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Shroom2A2ALU4 1481 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tagap1P0CAX8 505 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Fgfr1opQ66JX5 399 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ccdc57Q6PHN1 1016 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Gbp2Q9Z0E6 589 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ankrd50F7BE84 1390 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Kdm3aQ6PCM1 1323 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Btn2a2A4QPC6 514 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Znf568E9PYI1 671 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Vamp4O70480 141 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 EsrrbQ61539 433 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 BrapQ99MP8 591 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Lamc3Q9R0B6 1581 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Gas8Q60779 478 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ddx10Q80Y44 875 aaKnown RBP11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Fam177a1Q8BR63 207 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ccdc122Q8BVN0 290 aa11.57□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Dclk3Q8BWQ5 790 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Adcy3Q8VHH7 1145 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 RestQ8VIG1 1082 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ces1hD3Z298 562 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Zfp51Q3U4L8 781 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Micall1Q8BGT6 870 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Maip1Q8BHE8 291 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Mex3cQ05A36 652 aaKnown RBP11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Fnbp4Q6ZQ03 1031 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ribc1Q9D0B8 379 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Armc9Q9D2I5 817 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms