RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Kdm4aQ8BW72 1064 aa29.66■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Cdca7lQ922M5 438 aa29.66■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 NmiO35309 314 aa29.66■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Ppp4r3aQ6P2K6 820 aa29.66■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Zfp804bA0A0G2JGH6 1343 aa29.65■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Nlrp1aQ2LKU9 1182 aa29.65■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Amigo3Q8C2S7 508 aa29.65■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Hmg20bQ9Z104 317 aa29.65■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Ric1Q69ZJ7 1422 aa29.65■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Mdm2P23804 489 aa29.65■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Gtf2a1Q99PM3 378 aa29.65■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 AceP09470 1312 aa29.64■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 RubcnlQ3TD16 648 aa29.64■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 DbnlQ62418 436 aa29.64■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Bms1Q6PGF5 1284 aaKnown RBP29.64■■■□□ 2.34
Cldnd1-201ENSMUST00000023426 Ddrgk1Q80WW9 315 aa29.63■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Neurod6P48986 337 aa29.63■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Syde2E9PUP1 1314 aa29.62■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Col22a1E9Q7P1 1613 aa29.62■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Slx1bQ8BX32 270 aa29.62■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Tubb6Q922F4 447 aa29.62■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Paxip1Q6NZQ4 1056 aa29.61■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Polr3dQ91WD1 398 aa29.61■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Prl3d3A0A0M6L0J6 224 aa29.6■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Rbbp8nlA2ABX0 614 aa29.6■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 StrbpQ91WM1 672 aaKnown RBP29.6■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Zfp142G5E869 1843 aa29.6■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Ugt1a5B2RT14 529 aa29.6■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Dis3l2Q8CI75 870 aaKnown RBP29.6■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Fez1Q8K0X8 392 aa29.6■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Stard3nlQ9DCI3 235 aa29.59■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Gm21680A0A0G2JGR8 267 aa29.59■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Ube2hP62257 183 aa29.59■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Pkp1P97350 728 aaKnown RBP29.59■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Rrp12Q6P5B0 1295 aaKnown RBP29.59■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Sp8Q8BMJ8 486 aa29.59■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Nek11Q8C0Q4 628 aa29.59■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Cers3Q1A3B0 383 aa29.58■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Ints5Q8CHT3 1018 aa29.58■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 NaspQ99MD9 773 aaKnown RBP29.58■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Tiam2Q6ZPF3 1715 aa29.58■■■□□ 2.33
Cldnd1-201ENSMUST00000023426 Eef2kO08796 724 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 AppP12023 770 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Rbm27Q5SFM8 1060 aaKnown RBP29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Nol12Q8BG17 217 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Rps6kb1Q8BSK8 525 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Ehd4Q9EQP2 541 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Txnrd1Q9JMH6 613 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Mst1rQ62190 1378 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Fbxl16A2RT62 479 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 NfkbibQ60778 359 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Jarid2Q62315 1234 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Bmp2kQ91Z96 1138 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Med4Q9CQA5 270 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Cwc25Q9DBF7 416 aa29.57■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Sult6b1P0CC03 303 aa29.56■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Smc4Q8CG47 1286 aa29.56■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Aox1O54754 1333 aa29.56■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 F2rP30558 430 aa29.56■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Tbc1d30Q69ZT9 766 aa29.56■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Mrpl50Q8VDT9 159 aaKnown RBP29.56■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 AK157302I3ITR1 129 aa29.55■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 SrrtQ99MR6 875 aaKnown RBP29.55■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Isca1Q9D924 129 aa29.55■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Dhx38Q80X98 1228 aa29.54■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 AbraQ8BUZ1 375 aa29.54■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Ccdc178Q8CDV0 866 aa29.54■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 AtrnQ9WU60 1428 aa29.54■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Casc1Q6TDU8 730 aa29.54■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Prl3d2F6R3P9 224 aa29.53■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Tmc2Q8R4P4 888 aa29.53■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Rcan3Q9JKK0 239 aa29.53■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Usp48Q3V0C5 1052 aa29.52■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Fam184aE9PW83 1143 aa29.51■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Pdcl2Q78Y63 240 aa29.51■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Erich6bQ9D4S6 220 aa29.51■■■□□ 2.32
Cldnd1-201ENSMUST00000023426 Ppp6r1Q7TSI3 856 aa29.51■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Mrc1Q61830 1456 aa29.51■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 FanccP50652 591 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Fam102bQ8BQS4 339 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 DpydQ8CHR6 1025 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Mylk2Q8VCR8 613 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Erc1Q99MI1 1120 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Bloc1s2Q9CWG9 143 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Igbp1bQ9QZ29 343 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Brinp3Q499E0 766 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Atg9aQ68FE2 551 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Zfp113Q8C689 439 aa29.5■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Scn4aQ9ER60 1841 aa29.49■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Myd88P22366 296 aa29.49■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Mctp2Q5RJH2 878 aa29.49■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Vps54Q5SPW0 977 aa29.49■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Cep57l1Q8VDS7 400 aa29.49■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 LratQ9JI60 231 aa29.49■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Cdhr2E9Q7P9 1308 aa29.49■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Ank1Q02357 1862 aa29.48■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Rrp9Q91WM3 475 aaKnown RBP29.48■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Fam213aQ9CYH2 218 aa29.48■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Sos2Q02384 1333 aa29.47■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Atp8b3Q6UQ17 1335 aa29.47■■■□□ 2.31
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms