RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TCN1P20061 433 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 ZNF10P21506 573 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 EDNRAP25101 427 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 ATP5DP30049 168 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 RPL22P35268 128 aaKnown RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 PPARGP37231 505 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 STXBP1P61764 594 aaKnown RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 CDH17Q12864 832 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 ZNF154Q13106 437 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 GANABQ14697 944 aaKnown RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 RBBP5Q15291 538 aaKnown RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 SLC9B1Q4ZJI4 515 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 TCTEX1D4Q5JR98 221 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 AARS2Q5JTZ9 985 aaKnown RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 ZBTB37Q5TC79 503 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 SLC9A4Q6AI14 798 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 CASC4Q6P4E1 433 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 AFTPHQ6ULP2 937 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 Q6YL49 198 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 LRRC70Q7Z2Q7 622 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 SPATA21Q7Z572 469 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 CPNE8Q86YQ8 564 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 REXO1L1PQ8IX06 675 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 KLHDC8AQ8IYD2 350 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 CDK20Q8IZL9 346 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 TMEM86BQ8N661 226 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 OR52E2Q8NGJ4 325 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 ADAMTS16Q8TE57 1224 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 ADIPOR1Q96A54 375 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 OMA1Q96E52 524 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 TBL1YQ9BQ87 522 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 TBCDQ9BTW9 1192 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 NXF5Q9H1B4 397 aaKnown RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 GBA3Q9H227 469 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 DSN1Q9H410 356 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 C16orf95Q9H693 158 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 ZBTB26Q9HCK0 441 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 PIH1D1Q9NWS0 290 aaKnown RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 PAQR5Q9NXK6 330 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 PURGQ9UJV8 347 aaKnown RBP5.61□□□□□ -1.51
HDAC3-206ENST00000471968 FOXJ3Q9UPW0 622 aa5.61□□□□□ -1.51
HDAC3-206ENST00000471968 C3orf70A6NLC5 250 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 IFNW1P05000 195 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 YES1P07947 543 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 MELTFP08582 738 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 PABPC4LP0CB38 370 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 NPPBP16860 134 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 NAGAP17050 411 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 KDELR1P24390 212 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 HNRNPH1P31943 449 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 FEN1P39748 380 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 SKIV2L2P42285 1042 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 MAGEA1P43355 309 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 OR3A2P47893 321 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 RAB10P61026 200 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 IGLV3-21P80748 117 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 EGFEM1PQ0D2K5 195 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 PLCXD2Q0VAA5 305 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 NAE1Q13564 534 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 RNPS1Q15287 305 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 SPRED3Q2MJR0 410 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 ARL13AQ5H913 290 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 LGSNQ5TDP6 509 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 PPP1R2P3Q6NXS1 205 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 ZNF534Q76KX8 674 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 LUZP1Q86V48 1076 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 GSPT2Q8IYD1 628 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 SAMD14Q8IZD0 417 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 GBP7Q8N8V2 638 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 WFDC9Q8NEX5 89 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 OR4F17Q8NGA8 305 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 OR4L1Q8NH43 312 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 OR2V1Q8NHB1 315 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 RNF128Q8TEB7 428 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 CCT6BQ92526 530 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 RIT1Q92963 219 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 MS4A6EQ96DS6 147 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 REXO5Q96IC2 774 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 OR4F4Q96R69 305 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 TCF12Q99081 682 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 VAT1Q99536 393 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 KCNS3Q9BQ31 491 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 MRI1Q9BV20 369 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 MAK16Q9BXY0 300 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 P2RY12Q9H244 342 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 PRDM13Q9H4Q3 707 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 COPS7BQ9H9Q2 264 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 IP6K2Q9UHH9 426 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 SOX13Q9UN79 622 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 AAR2Q9Y312 384 aaKnown RBP5.6□□□□□ -1.51
HDAC3-206ENST00000471968 POMT1Q9Y6A1 747 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
HDAC3-206ENST00000471968 MROH6A6NGR9 719 aa5.59□□□□□ -1.51
HDAC3-206ENST00000471968 CLGNO14967 610 aa5.59□□□□□ -1.51
HDAC3-206ENST00000471968 ZBTB14O43829 449 aa5.59□□□□□ -1.51
HDAC3-206ENST00000471968 MGRN1O60291 552 aa5.59□□□□□ -1.51
HDAC3-206ENST00000471968 NIPSNAP2O75323 286 aa5.59□□□□□ -1.51
HDAC3-206ENST00000471968 EEDO75530 441 aaKnown RBP5.59□□□□□ -1.51
HDAC3-206ENST00000471968 CBX7O95931 251 aa5.59□□□□□ -1.51
HDAC3-206ENST00000471968 IGHV3-9P01782 118 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms