RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SERPINI1Q99574 410 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SH3GL2Q99962 352 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 NTMT1Q9BV86 223 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ITPAQ9BY32 194 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 UGT2B28Q9BY64 529 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ANGPTL4Q9BY76 406 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CDC42EP4Q9H3Q1 356 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 METTL7AQ9H8H3 244 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 WDR41Q9HAD4 459 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 GALNT9Q9HCQ5 603 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SERHLQ9NQF3 203 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 RASSF1Q9NS23 344 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SIRT5Q9NXA8 310 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 PSD3Q9NYI0 1048 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 MAT2BQ9NZL9 334 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 TMEM216Q9P0N5 145 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 XPR1Q9UBH6 696 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 HEY2Q9UBP5 337 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF225Q9UK10 706 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 PCTPQ9UKL6 214 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CES1P1Q9UKY3 287 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC12A4Q9UP95 1085 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 RTTNQ86VV8 2226 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 DCHS2Q6V1P9 2916 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 HIVEP1P15822 2718 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ADGRG4Q8IZF6 3080 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 C1orf226A1L170 272 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 TUBAL3A6NHL2 446 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 A6NNC1 897 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CAPN14A8MX76 684 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 STX16-NPEPL1H3BU86 382 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 GOLGA8RI6L899 631 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 STX16O14662 325 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 SMIM24O75264 130 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 UGT2B11O75310 529 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 REM1O75628 298 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 KRT38O76015 456 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 URI1O94763 535 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ESRRBO95718 433 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 HPNP05981 417 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 INHBAP08476 426 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 RBP1P09455 135 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CTAGE8P0CG41 777 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CD1EP15812 388 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CSNK2A2P19784 350 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 KLK2P20151 261 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CNTFP26441 200 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 PTPN6P29350 595 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 PHBP35232 272 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 TIMP3P35625 211 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 HSD17B3P37058 310 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 MAGEA12P43365 314 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 LIMS1P48059 325 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 EMDP50402 254 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 SERPINB8P50452 374 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ARFIP1P53367 373 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 NRG3P56975 720 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 PHC1P78364 1004 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 RAE1P78406 368 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 DBPQ10586 325 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 TBL3Q12788 808 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 IFT88Q13099 833 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 NAB1Q13506 487 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 RPS6KA2Q15349 733 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ACSF3Q4G176 576 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 UNC50Q53HI1 259 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 NSUN5P2Q63ZY6 315 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 TIGD3Q6B0B8 471 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 OR52E8Q6IFG1 317 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 C8orf74Q6P047 294 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC48A1Q6P1K1 146 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 PGM2L1Q6PCE3 622 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 Q71RC1 249 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF572Q7Z3I7 529 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 COMMD6Q7Z4G1 85 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CCDC91Q7Z6B0 441 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 LUZP2Q86TE4 346 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CTAGE4Q8IX94 777 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 DND1Q8IYX4 353 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 C1orf52Q8N6N3 182 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CDYL2Q8N8U2 506 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 C9orf106Q8NAJ2 232 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 NOA1Q8NC60 698 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 C7orf57Q8NEG2 295 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 MYRIPQ8NFW9 859 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 OR7G1Q8NGA0 311 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 OR4N2Q8NGD1 307 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 GOT1L1Q8NHS2 421 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 DCAKDQ8WVC6 231 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 RNASE6Q93091 150 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 HGDQ93099 445 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 TMBIM1Q969X1 311 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 EXOSC8Q96B26 276 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 INTS12Q96CB8 462 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 KLHL29Q96CT2 875 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 FOXRED1Q96CU9 486 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 NTNG2Q96CW9 530 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 OMA1Q96E52 524 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CNRIP1Q96F85 164 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms