RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 EBPQ15125 230 aaKnown RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 EXT1Q16394 746 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 CYP27C1Q4G0S4 372 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 CRB2Q5IJ48 1285 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 DCAF10Q5QP82 559 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 HSDL2Q6YN16 418 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 RNF111Q6ZNA4 994 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 VASH1Q7L8A9 365 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 ARPINQ7Z6K5 226 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 ZAR1Q86SH2 424 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 VASH2Q86V25 355 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 SLC44A2Q8IWA5 706 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 MICU2Q8IYU8 434 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 LGI4Q8N135 537 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 FAM13CQ8NE31 585 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 C17orf47Q8NEP4 570 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 OR2T12Q8NG77 320 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 OR52E4Q8NGH9 312 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 OR4C3Q8NH37 302 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 GPR151Q8TDV0 419 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 PIK3R3Q92569 461 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 SLC9A6Q92581 669 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 CDS1Q92903 461 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 NXPE2Q96DL1 559 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 OTUB1Q96FW1 271 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 VMP1Q96GC9 406 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 REXO5Q96IC2 774 aaKnown RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 LCORQ96JN0 433 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 ART5Q96L15 291 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 BTBD9Q96Q07 612 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 TRNT1Q96Q11 434 aaKnown RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 EFHD1Q9BUP0 239 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 SPATA9Q9BWV2 254 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 BTBD2Q9BX70 525 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 NXF5Q9H1B4 397 aaKnown RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 SLC38A1Q9H2H9 487 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 RAD21L1Q9H4I0 556 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 ALG2Q9H553 416 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 DENND2DQ9H6A0 471 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 RUBCNLQ9H714 662 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 ZNF160Q9HCG1 818 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 EQTNQ9NQ60 294 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 DUSP22Q9NRW4 184 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 THUMPD1Q9NXG2 353 aaKnown RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 ACTR3BQ9P1U1 418 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 MYOTQ9UBF9 498 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 PRODH2Q9UF12 536 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 C19orf25Q9UFG5 118 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 EGFL7Q9UHF1 273 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 FAF1Q9UNN5 650 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 CORO2BQ9UQ03 480 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 LIPT1Q9Y234 373 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 CFL2Q9Y281 166 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 PADI2Q9Y2J8 665 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 CHST2Q9Y4C5 530 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 PTPRBP23467 1997 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 AKAP13Q12802 2813 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 NSG1A0A0A6YYJ2 146 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 A0A0G2JPF8 293 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 TRBV11-1A0A0K0K1C0 115 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 TCRBV5S2A0A599 114 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CDC14CA4D256 554 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 SLC35F4A4IF30 521 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CFAP73A6NFT4 308 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 PRAMEF25A6NGN4 478 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 A8MUI8 341 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 FAM220BPB1ANY3 271 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 HNRNPCL2B2RXH8 293 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 HNRNPCL3B7ZW38 293 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 NPIPB9F8W1W9 429 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CXCR6O00574 342 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ADAM10O14672 748 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 KLK10O43240 276 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 TPST1O60507 370 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 TSPAN2O60636 221 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 PRAMEF2O60811 474 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 COQ9O75208 318 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 DNAJB5O75953 348 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 IL33O95760 270 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 AGR2O95994 175 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 IGHA1P01876 353 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 SERPINA7P05543 415 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CHRM4P08173 479 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 HNRNPCL4P0DMR1 293 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 NR2F1P10589 423 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ITGAMP11215 1152 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 NAGAP17050 411 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 TRHRP34981 398 aaPredicted RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 NR0B1P51843 470 aaKnown RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 MLF1P58340 268 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 MRPS22P82650 360 aaKnown RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 CHAF1BQ13112 559 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ATP1A4Q13733 1029 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 CCNIQ14094 377 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 SCARB2Q14108 478 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 MAPK14Q16539 360 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 DUSP7Q16829 419 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ZNF630Q2M218 657 aaPredicted RBP5.49□□□□□ -1.53
USP39-213ENST00000467885 BTBD16Q32M84 506 aa5.49□□□□□ -1.53
USP39-213ENST00000467885 ZNF791Q3KP31 576 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms