RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ICAM2P13598 275 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 NQO1P15559 274 aaKnown RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 ME2P23368 584 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 KDELR2P33947 212 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 CHI3L1P36222 383 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 CRYBA2P53672 197 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 SOX8P57073 446 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 RNF4P78317 190 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 PRR5P85299 388 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 RBBP4Q09028 425 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 TRAP1Q12931 704 aaKnown RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 TP53BP2Q13625 1128 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 IL10RAQ13651 578 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 VEZF1Q14119 521 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 LASP1Q14847 261 aaKnown RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 SYPL1Q16563 259 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 VMACQ2NL98 169 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ARHGAP11BQ3KRB8 267 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 SPDYE7PQ495Y7 208 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 CRTC2Q53ET0 693 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 SAMD4BQ5PRF9 694 aaKnown RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 PLAG1Q6DJT9 500 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 GLYATQ6IB77 296 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 TNFAIP8L2Q6P589 184 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 PAPD4Q6PIY7 484 aaKnown RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 NPSR1Q6W5P4 371 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 C16orf47Q6ZP98 133 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 CCDC80Q76M96 950 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ZNF771Q7L3S4 317 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 OLIG3Q7RTU3 272 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 IFNEQ86WN2 208 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 C9orf40Q8IXQ3 194 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ULK2Q8IYT8 1036 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 IL22RA1Q8N6P7 574 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 METTL25Q8N6Q8 603 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ZNF441Q8N8Z8 693 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ANKFN1Q8N957 763 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 CDRT4Q8N9R6 151 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 CHDHQ8NE62 594 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 OR5D16Q8NGK9 328 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 OR8K3Q8NH51 312 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ADAMTS15Q8TE58 950 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 WDR60Q8WVS4 1066 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 GATA6Q92908 595 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 MAL2Q969L2 176 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 NCLNQ969V3 563 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 NTNG2Q96CW9 530 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 STACQ99469 402 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 LPAR4Q99677 370 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 CNPPD1Q9BV87 410 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 DPH1Q9BZG8 443 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 SAP130Q9H0E3 1048 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 GORASP2Q9H8Y8 452 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 MTHFD2LQ9H903 347 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 GPN2Q9H9Y4 310 aaPredicted RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 FOLH1BQ9HBA9 442 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 BCL2L10Q9HD36 194 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 MMP25Q9NPA2 562 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 A4GALTQ9NPC4 353 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 DDX18Q9NVP1 670 aaKnown RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 P4HTMQ9NXG6 502 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 SLC7A8Q9UHI5 535 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 KCNE5Q9UJ90 142 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 POMPQ9Y244 141 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 DCHS1Q96JQ0 3298 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ADAMTS20P59510 1910 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 C15orf38-AP3S2A0A0A6YYH1 394 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 TTC36A6NLP5 189 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 OR6C76A6NM76 312 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 A8MVJ9 347 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 ASNA1O43681 348 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 DYRK3O43781 588 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 PDE5AO76074 875 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 KCNK2O95069 426 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 MFN2O95140 757 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 NADKO95544 446 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 HPP00738 406 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 CELA2AP08217 269 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 ALOX5P09917 674 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 ARAFP10398 606 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 NCK1P16333 377 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 GGT1P19440 569 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 TCN1P20061 433 aaPredicted RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 OTX2P32243 289 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 SOAT1P35610 550 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 SOX11P35716 441 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 PIGAP37287 484 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 EIF2S3P41091 472 aaKnown RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 PRIM2P49643 509 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 CLCN2P51788 898 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 PCBP3P57721 371 aaKnown RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 CORO7P57737 925 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 DSTNP60981 165 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 DCAF7P61962 342 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 TXNL4AP83876 142 aaKnown RBP5.5□□□□□ -1.53
USP39-213ENST00000467885 CDK6Q00534 326 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 CHRNEQ04844 493 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 FUT5Q11128 374 aa5.5□□□□□ -1.53
USP39-213ENST00000467885 FADDQ13158 208 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms