RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TRAPPC6AO75865 159 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 SNX4O95219 450 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 HPNP05981 417 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 CSNK2A2P19784 350 aaPredicted RBP10.82□□□□□ -0.68
GABPB1-206ENST00000543881 PTGDSP41222 190 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 ALDH9A1P49189 494 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 TMED10P49755 219 aaKnown RBP10.82□□□□□ -0.68
GABPB1-206ENST00000543881 CDK9P50750 372 aaKnown RBP10.82□□□□□ -0.68
GABPB1-206ENST00000543881 NRG3P56975 720 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 MRPS35P82673 323 aaKnown RBP10.82□□□□□ -0.68
GABPB1-206ENST00000543881 SHEQ5VZ18 495 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 LIX1Q8N485 282 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 NAXEQ8NCW5 288 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 LRRN4CLQ8ND94 238 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 SPATA3Q8NHX4 192 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 HGDQ93099 445 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 KLHL29Q96CT2 875 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 NODALQ96S42 347 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 ZNF382Q96SR6 550 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 TIMP4Q99727 224 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 TXLNGYQ9BZA5 131 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 ACPTQ9BZG2 426 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 EPB41L4BQ9H329 900 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 BEX4Q9NWD9 120 aaPredicted RBP10.82□□□□□ -0.68
GABPB1-206ENST00000543881 BCAP29Q9UHQ4 241 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 C15orf41Q9Y2V0 281 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 PLLPQ9Y342 182 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 SLC6A5Q9Y345 797 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 CSPG4Q6UVK1 2322 aa10.82□□□□□ -0.68
GABPB1-206ENST00000543881 KIAA1549Q9HCM3 1950 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 GOLGA8RI6L899 631 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 GNB5O14775 395 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 NME6O75414 186 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 PPM1BO75688 479 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 PCSK2P16519 638 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 CD53P19397 219 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 TAC1P20366 129 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 IMPDH1P20839 514 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 ATP5F1P24539 256 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 PCSK6P29122 969 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 PTPN6P29350 595 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 EMDP50402 254 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 TRA2BP62995 288 aaKnown RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 RASA2Q15283 850 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 ACSF3Q4G176 576 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 EIPR1Q53HC9 387 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 DCST1Q5T197 706 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 LGSNQ5TDP6 509 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 C6orf163Q5TEZ5 329 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 POMZP3Q6PJE2 187 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 GPRIN3Q6ZVF9 776 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 TRMT10CQ7L0Y3 403 aaKnown RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 PACS2Q86VP3 889 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 TNIP2Q8NFZ5 429 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 OR52R1Q8NGF1 315 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 LINC01560Q8TB33 94 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 MZB1Q8WU39 189 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 NANOS1Q8WY41 292 aaKnown RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 MTBPQ96DY7 904 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 OMA1Q96E52 524 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 APIPQ96GX9 242 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 TMEM41AQ96HV5 264 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 LCORQ96JN0 433 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 KCNA7Q96RP8 456 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 ANKRA2Q9H9E1 313 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 EHD3Q9NZN3 535 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 CLCA1A8K7I4 914 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 AHRRA9YTQ3 701 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 EPPINO95925 133 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 KRT6AP02538 564 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 KRT6BP04259 564 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 IL3P08700 152 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 HSD3B1P14060 373 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 NAGAP17050 411 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 BMP7P18075 431 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 HSD3B2P26439 372 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 CEACAM8P31997 349 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 KRT6CP48668 564 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 MASP1P48740 699 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 PRKAA2P54646 552 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 HMGCS1Q01581 520 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 CSTF3Q12996 717 aaKnown RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 SLC29A2Q14542 456 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 ZNF628Q5EBL2 1059 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 WIPI1Q5MNZ9 446 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 TIGD3Q6B0B8 471 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 VASNQ6EMK4 673 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 SCIMPQ6UWF3 145 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 CXXC5Q7LFL8 322 aaKnown RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 KIF18BQ86Y91 864 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 CCDC116Q8IYX3 515 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 METTL6Q8TCB7 284 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 L3HYPDHQ96EM0 354 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 C11orf24Q96F05 449 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-206ENST00000543881 FAIM2Q9BWQ8 316 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 UGT2B28Q9BY64 529 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 PRDM14Q9GZV8 571 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 GSTO2Q9H4Y5 243 aa10.81□□□□□ -0.68
GABPB1-206ENST00000543881 GALNT9Q9HCQ5 603 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms