RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ZNF354AO60765 605 aaPredicted RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 BCAS2O75934 225 aaPredicted RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 SEC24DO94855 1032 aaPredicted RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 NKX2-2O95096 273 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ADRB1P08588 477 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 OR12D1P0DN82 309 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ACP2P11117 423 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 LIPCP11150 499 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 COX6A1P12074 109 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ETFAP13804 333 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 LIFP15018 202 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 PPIBP23284 216 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 HTR1EP28566 365 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 GABRA3P34903 492 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 FOLR3P41439 243 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 CRATP43155 626 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 GSK3BP49841 420 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 PGDP52209 483 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 SLC7A2P52569 658 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 SLC26A5P58743 744 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 RPS26P62854 115 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 KCNJ2P63252 427 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 MXRA7P84157 204 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 TRIM25Q14258 630 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 PCOLCEQ15113 449 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 DUSP5Q16690 384 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 KIF26BQ2KJY2 2108 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 DNAL1Q4LDG9 190 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 MFSD12Q6NUT3 480 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 H3F3CQ6NXT2 135 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 CDC73Q6P1J9 531 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 BHLHB9Q6PI77 547 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 WDR53Q7Z5U6 358 aaPredicted RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 SERPINA11Q86U17 422 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 PTRH1Q86Y79 214 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 HPS6Q86YV9 775 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 GALNT12Q8IXK2 581 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ZZZ3Q8IYH5 903 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ARHGAP24Q8N264 748 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ARMC10Q8N2F6 343 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 VWA5B2Q8N398 1253 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 SVOPQ8N4V2 548 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 TRIML2Q8N7C3 387 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 FAM156AQ8NDB6 213 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 B3GNT7Q8NFL0 401 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 OR4N2Q8NGD1 307 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 OR56A1Q8NGH5 318 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 OR14A16Q8NHC5 309 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 C16orf52Q8NHV5 167 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 M1APQ8TC57 530 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 PNPT1Q8TCS8 783 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 SLC2A12Q8TD20 617 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 SLC38A5Q8WUX1 472 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 PSMF1Q92530 271 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 TP53INP1Q96A56 240 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 OR7D2Q96RA2 312 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 SDF2Q99470 211 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ECSITQ9BQ95 431 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 LMF2Q9BU23 707 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 ACTRT3Q9BYD9 372 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 OR8D2Q9GZM6 311 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 PCDHAC1Q9H158 963 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 OR51I1Q9H343 314 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 PIGUQ9H490 435 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 TMEM38AQ9H6F2 299 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 LIN28AQ9H9Z2 209 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 NEUROD4Q9HD90 331 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 SPAG4Q9NPE6 437 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ZCCHC3Q9NUD5 404 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.52□□□□□ -1.53
USP39-213ENST00000467885 FBXO34Q9NWN3 711 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 NDE1Q9NXR1 346 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ADA2Q9NZK5 511 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 DKK4Q9UBT3 224 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 BCAP29Q9UHQ4 241 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 KCND3Q9UK17 655 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 PRPF19Q9UMS4 504 aaKnown RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 ERVK-19Q9WJR5 959 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 DTX4Q9Y2E6 619 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 AP3M1Q9Y2T2 418 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 L3MBTL1Q9Y468 752 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 HEMK1Q9Y5R4 338 aaPredicted RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 CNOT1A5YKK6 2376 aaKnown RBP5.51□□□□□ -1.53
USP39-213ENST00000467885 RNF103-CHMP3A0A140T963 221 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 C2orf92A0A1B0GVN3 265 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 GXYLT2A0PJZ3 443 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ELOVL7A1L3X0 281 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 SAGE2PA6NJ88 616 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 DUXAA6NLW8 204 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 FIGNL2A6NMB9 653 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 M0QX08 132 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 TAF4O00268 1085 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 TO15178 435 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 DNAJA2O60884 412 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 ZFAND5O76080 213 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 SOX30O94993 753 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 PGM3O95394 542 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 IGKV1D-16P01601 117 aa5.51□□□□□ -1.53
USP39-213ENST00000467885 GUSBP08236 651 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms