RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ACOT8O14734 319 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 PCDH17O14917 1159 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 PRKNO60260 465 aaPredicted RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 OR10H2O60403 315 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 CREG1O75629 220 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 DNAJC8O75937 253 aaPredicted RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 SLITRK5O94991 958 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 ANP32DO95626 131 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 KRT75O95678 551 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 IGHEP01854 428 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 IFNA16P05015 189 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 HMGN2P05204 90 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 CT45A8P0DMV1 189 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 CT45A9P0DMV2 189 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 HSD17B1P14061 328 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 DRD5P21918 477 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 NTSP30990 170 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 SSTR4P31391 388 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 GPC1P35052 558 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 PGM1P36871 562 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 DLSTP36957 453 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 MC3RP41968 323 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 MAGEA8P43361 318 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 PPICP45877 212 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 EEFSECP57772 596 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 MTPNP58546 118 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 PSG6Q00889 435 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 LIPEQ05469 1076 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 VAC14Q08AM6 782 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 Q0VFX4 171 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 SRSF6Q13247 344 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 CLN3Q13286 438 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 GAB1Q13480 694 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 DNASE1L3Q13609 305 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 EXOSC7Q15024 291 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 ELAVL1Q15717 326 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 FXNQ16595 210 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 TBC1D25Q3MII6 688 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 SPATS1Q496A3 300 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 CT45A2Q5DJT8 189 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 RNFT1Q5M7Z0 435 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.53□□□□□ -1.52
USP39-213ENST00000467885 MFSD4BQ5TF39 518 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 HEPHL1Q6MZM0 1159 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 ZCCHC12Q6PEW1 402 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 C16orf89Q6UX73 402 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 BNC2Q6ZN30 1099 aaPredicted RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 NDUFAF7Q7L592 441 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 PPP1R32Q7Z5V6 425 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 NET1Q7Z628 596 aaPredicted RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 RNF130Q86XS8 419 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 PTOV1Q86YD1 416 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 FBXW8Q8N3Y1 598 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 KIF2BQ8N4N8 673 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 HORMAD2Q8N7B1 307 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 RNF148Q8N7C7 305 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 APCDD1LQ8NCL9 501 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 OR7G1Q8NGA0 311 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 OR11G2Q8NGC1 345 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 OR52R1Q8NGF1 315 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 OR1N1Q8NGS0 311 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 OR10A6Q8NH74 314 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 OR5AK3PQ8NH89 298 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 ZFP28Q8NHY6 868 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 SFXN5Q8TD22 340 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 ELP5Q8TE02 316 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 XAGE5Q8WWM1 108 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 METTL21AQ8WXB1 218 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 NANOS1Q8WY41 292 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 DAZLQ92904 295 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 FGF11Q92914 225 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 RAB8BQ92930 207 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 MOAP1Q96BY2 351 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 ZG16BQ96DA0 208 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 FBXL20Q96IG2 436 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 VSTM2LQ96N03 204 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 SH3GL1Q99961 368 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 PELOQ9BRX2 385 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 SLC35A5Q9BS91 424 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 YIPF4Q9BSR8 244 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 CRB3Q9BUF7 120 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 OR10A5Q9H207 317 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 MMADHCQ9H3L0 296 aaPredicted RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 PIF1Q9H611 641 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 ADAP2Q9NPF8 381 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 THSD1Q9NS62 852 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 GIN1Q9NXP7 522 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 ENTPD4Q9Y227 616 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 GPR55Q9Y2T6 319 aaPredicted RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 MRPS18BQ9Y676 258 aaKnown RBP5.53□□□□□ -1.52
USP39-213ENST00000467885 CLCA3PQ9Y6N3 262 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 SYNDIG1LA6NDD5 238 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 ERICH4A6NGS2 130 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 TTLL8A6PVC2 850 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 TMEM229AB2RXF0 380 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 C9J4A7 227 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 HMGN4O00479 90 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 NKX2-8O15522 239 aa5.52□□□□□ -1.53
USP39-213ENST00000467885 TLX3O43711 291 aaPredicted RBP5.52□□□□□ -1.53
USP39-213ENST00000467885 FCMRO60667 390 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms