RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 C3orf18Q9UK00 162 aa5.55□□□□□ -1.52
USP39-213ENST00000467885 TCFL5Q9UL49 500 aa5.55□□□□□ -1.52
USP39-213ENST00000467885 PPIEQ9UNP9 301 aaKnown RBP5.55□□□□□ -1.52
USP39-213ENST00000467885 MRPS33Q9Y291 106 aaKnown RBP5.55□□□□□ -1.52
USP39-213ENST00000467885 MSRB2Q9Y3D2 182 aa5.55□□□□□ -1.52
USP39-213ENST00000467885 PTRH2Q9Y3E5 179 aaKnown RBP5.55□□□□□ -1.52
USP39-213ENST00000467885 PCDHGA6Q9Y5G7 932 aa5.55□□□□□ -1.52
USP39-213ENST00000467885 KCNE3Q9Y6H6 103 aa5.55□□□□□ -1.52
USP39-213ENST00000467885 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.55□□□□□ -1.52
USP39-213ENST00000467885 MDC1Q14676 2089 aaKnown RBP5.55□□□□□ -1.52
USP39-213ENST00000467885 SCN3AQ9NY46 2000 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 A0A1W2PQ72 361 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 PRORSD1PA6NEY8 169 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 TMEM200CA6NKL6 621 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 C21orf140B9A014 251 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ANKRD65E5RJM6 399 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 STMND1H3BQB6 276 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 NME4O00746 187 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 SOCS6O14544 535 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 GYG2O15488 501 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 BRINP1O60477 761 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 TNFRSF21O75509 655 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 SORBS2O94875 1100 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 PSMG1O95456 288 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 TFPTP0C1Z6 253 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 WT1P19544 449 aaPredicted RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 NT5EP21589 574 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 MATN1P21941 496 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 MMP11P24347 488 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 MSX2P35548 267 aaPredicted RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 ID4P47928 161 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 NUDT2P50583 147 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 PRKAG1P54619 331 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 CASP9P55211 416 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 SLC37A1P57057 533 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 OR4D2P58180 307 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 RPS18P62269 152 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 RPS15P62841 145 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 MRPS35P82673 323 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 EEF1A2Q05639 463 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 HSPB3Q12988 150 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ZNF267Q14586 743 aaPredicted RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 MYBPC3Q14896 1274 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.54□□□□□ -1.52
USP39-213ENST00000467885 TRMT5Q32P41 509 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 MINDY4Q4G0A6 757 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 SFT2D3Q587I9 215 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 PIGGQ5H8A4 983 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 COX20Q5RI15 118 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 C6orf10Q5SRN2 563 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 FAAH2Q6GMR7 532 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 TMEM107Q6UX40 140 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 TMEM64Q6YI46 380 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 LANCL3Q6ZV70 420 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 CPEB2Q7Z5Q1 589 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 DHDDSQ86SQ9 333 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ENDOVQ8N8Q3 282 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 SLC16A11Q8NCK7 471 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 MORN4Q8NDC4 146 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 NUP43Q8NFH3 380 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 OR8J3Q8NGG0 315 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 OR52N2Q8NGI0 321 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 FAM110BQ8TC76 370 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 MIPOL1Q8TD10 442 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ADAMTS17Q8TE56 1095 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ADIPOR1Q96A54 375 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 C8orf44Q96CB5 159 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 NEURL3Q96EH8 262 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 MAGED4Q96JG8 741 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 CLPTM1LQ96KA5 538 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ZNF578Q96N58 590 aaPredicted RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 DGAT2Q96PD7 388 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 CPPED1Q9BRF8 314 aaPredicted RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 THTPAQ9BU02 230 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 THUMPD3Q9BV44 507 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 SEMA4CQ9C0C4 833 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ZNF700Q9H0M5 742 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 LRMDAQ9H2I8 198 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 SERHL2Q9H4I8 314 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 C3orf14Q9HBI5 128 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 SEMA3GQ9NS98 782 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 GIMAP4Q9NUV9 329 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 C14orf105Q9NVL8 296 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 PTGFRNQ9P2B2 879 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 ABCD2Q9UBJ2 740 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 GPN3Q9UHW5 284 aaPredicted RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 ZNF223Q9UK11 482 aaPredicted RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 NXT1Q9UKK6 140 aaKnown RBP5.54□□□□□ -1.52
USP39-213ENST00000467885 PACSIN3Q9UKS6 424 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 VPS4AQ9UN37 437 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 USP22Q9UPT9 525 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 SNX8Q9Y5X2 465 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 HS3ST3B1Q9Y662 390 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 AK5Q9Y6K8 562 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 SEC16AO15027 2179 aa5.54□□□□□ -1.52
USP39-213ENST00000467885 CEP250Q9BV73 2442 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 IGHV1-45A0A0A0MS14 117 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 EVPLLA8MZ36 301 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 C17orf105B2RV13 164 aa5.53□□□□□ -1.52
USP39-213ENST00000467885 MASP2O00187 686 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms