RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 FCRL1Q96LA6 429 aa8.62□□□□□ -1.03
GTF2A1-203ENST00000553612 MICU1Q9BPX6 476 aa8.62□□□□□ -1.03
GTF2A1-203ENST00000553612 TDP1Q9NUW8 608 aa8.62□□□□□ -1.03
GTF2A1-203ENST00000553612 PURGQ9UJV8 347 aaKnown RBP8.62□□□□□ -1.03
GTF2A1-203ENST00000553612 ADAM18Q9Y3Q7 739 aa8.62□□□□□ -1.03
GTF2A1-203ENST00000553612 HCN1O60741 890 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 PCDH8O95206 1070 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ADRA2BP18089 450 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 KIR2DL3P43628 341 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ACTBP60709 375 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ACTG1P63261 375 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 SLC36A4Q6YBV0 504 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ZDHHC21Q8IVQ6 265 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 C9orf62Q8N4C0 152 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 SAMD12Q8N8I0 201 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 L3HYPDHQ96EM0 354 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ZNF514Q96K75 400 aaPredicted RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 SULT4A1Q9BR01 284 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ISCA1Q9BUE6 129 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 PIRTP0C851 137 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 NR2F6P10588 404 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 HOXB3P14651 431 aaPredicted RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 NFYBP25208 207 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 TAP2Q03519 686 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 MFSD14CQ5VZR4 134 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 LEMD1Q68G75 181 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 OR2A2Q6IF42 318 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 GALNT10Q86SR1 603 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 PHACTR4Q8IZ21 702 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 GPR137CQ8N3F9 429 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ZCCHC4Q9H5U6 513 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ACOT13Q9NPJ3 140 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 MIOSQ9NXC5 875 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 MS4A12Q9NXJ0 267 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 PUS1Q9Y606 427 aaKnown RBP eCLIP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 CEMIPQ8WUJ3 1361 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 C2orf92A0A1B0GVN3 265 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 LRCH4O75427 683 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ITGAVP06756 1048 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 FGF3P11487 239 aaPredicted RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 NTSP30990 170 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 POLR2JP52435 117 aaKnown RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 RIPPLY3P57055 190 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 MTMR1Q13613 665 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 COL9A2Q14055 689 aaPredicted RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 BAIAP2L2Q6UXY1 529 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ZNF836Q6ZNA1 936 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 RANBP3LQ86VV4 465 aaPredicted RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 OR8S1Q8NH09 359 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 GLYATL2Q8WU03 294 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 SMARCD2Q92925 531 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 CASD1Q96PB1 797 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 CDK15Q96Q40 435 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 OR14A2Q96R54 314 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 MGLLQ99685 303 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 NCOR1P1Q9H4R4 102 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 FN3KRPQ9HA64 309 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 TRPV4Q9HBA0 871 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 PGAP2Q9UHJ9 254 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 SAMD4AQ9UPU9 718 aaKnown RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ZNF587BE7ETH6 402 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 OGTO15294 1046 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 SOX14O95416 240 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 SDHAP31040 664 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 CTF1Q16619 201 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 TMEM71Q6P5X7 295 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 TMUB2Q71RG4 321 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 PLEKHH3Q7Z736 793 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 B3GNT8Q7Z7M8 397 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 CREB3L4Q8TEY5 395 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 OR52E6Q96RD3 313 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 NXF2Q9GZY0 626 aaKnown RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ENKD1Q9H0I2 346 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 MUTYHQ9UIF7 546 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 KLRG2A4D1S0 409 aaPredicted RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 CNIH1O95406 144 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 AHSGP02765 367 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 SORDQ00796 357 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 TNFRSF9Q07011 255 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 CEBPEQ15744 281 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ABLIM2Q6H8Q1 611 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 MCEMP1Q8IX19 187 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 FOXJ1Q92949 421 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 FBXO32Q969P5 355 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 PARD6GQ9BYG4 376 aaPredicted RBP8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ALOXE3Q9BYJ1 711 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 ZIM2Q9NZV7 527 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 TLR6Q9Y2C9 796 aa8.61□□□□□ -1.03
GTF2A1-203ENST00000553612 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TRAV34A0A0B4J273 112 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 A0A1W2PP18 115 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 DUXAA6NLW8 204 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 AP4M1O00189 453 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 LRRTM2O43300 516 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CPNE6O95741 557 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 PHKG2P15735 406 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TBXA2RP21731 343 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 NDUFS1P28331 727 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 SERTAD2Q14140 314 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 SMIM5Q71RC9 77 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms