RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 VN1R1Q9GZP7 353 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 CXorf36Q9H7Y0 433 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 WDR54Q9H977 334 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ANKRA2Q9H9E1 313 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 WDR41Q9HAD4 459 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 CXorf21Q9HAI6 301 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MIEF1Q9NQG6 463 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 SIRT3Q9NTG7 399 aaPredicted RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 ATAD3AQ9NVI7 634 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 FAM120CQ9NX05 1096 aaKnown RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 TAS2R9Q9NYW1 312 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 VAPAQ9P0L0 249 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 IFT80Q9P2H3 777 aaPredicted RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 CTSFQ9UBX1 484 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 CD300AQ9UGN4 299 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 LEF1Q9UJU2 399 aaPredicted RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 ACSL6Q9UKU0 697 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MKL2Q9ULH7 1088 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MMACHCQ9Y4U1 282 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 NEUROG3Q9Y4Z2 214 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ZNF780BQ9Y6R6 833 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 SPACA6W5XKT8 324 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 KNTC1P50748 2209 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 SNRNP200O75643 2136 aaKnown RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 FAM186AA6NE01 2351 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 LOC102723996A0A087X1L8 192 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 TCRBV16S1A1N1A0A5B0 115 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 BBIP1A8MTZ0 92 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 IDSB3KWA1 339 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 HRKO00198 91 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 UPK1AO00322 258 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 RFXANKO14593 260 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 MRASO14807 208 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 EFSO43281 561 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 PLOD3O60568 738 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 NME6O75414 186 aaPredicted RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 CDC123O75794 336 aaPredicted RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 ABCB1P08183 1280 aaPredicted RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 KRT16P08779 473 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 CD63P08962 238 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 CT62P0C5K7 136 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 GPX2P18283 190 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 SPINK2P20155 84 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 UQCRC2P22695 453 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 SLC6A2P23975 617 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 RBMS1P29558 406 aaKnown RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 PTGER1P34995 402 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 HPCAL1P37235 193 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 PLA2G5P39877 138 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 MAP3K8P41279 467 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 STT3AP46977 705 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 CCT3P49368 545 aaKnown RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 MAN2A2P49641 1150 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 CDK9P50750 372 aaKnown RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 NCALDP61601 193 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 GABREP78334 506 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 LRRC74AQ0VAA2 488 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 FUT7Q11130 342 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 SLC13A2Q13183 592 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 DUSP8Q13202 625 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 ART3Q13508 389 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 SERTAD2Q14140 314 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 SSPNQ14714 243 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 TGIF1Q15583 401 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 LTB4RQ15722 352 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 NSDHLQ15738 373 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 MMEL1Q495T6 779 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 TIGD2Q4W5G0 525 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 EXOSC6Q5RKV6 272 aaKnown RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 ARHGAP40Q5TG30 622 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 AP1ARQ63HQ0 302 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 REP15Q6BDI9 236 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 OR52E8Q6IFG1 317 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 FAM198BQ6UWH4 519 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 QSOX2Q6ZRP7 698 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 SHISA6Q6ZSJ9 500 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 CCDC121Q6ZUS5 278 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 C6orf120Q7Z4R8 191 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 PRSS58Q8IYP2 241 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 SAMD14Q8IZD0 417 aaPredicted RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 ST13P4Q8IZP2 240 aaPredicted RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 NLGN4XQ8N0W4 816 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 C10orf111Q8N326 155 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 ESX1Q8N693 406 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 ZNF615Q8N8J6 731 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 PCYOX1LQ8NBM8 494 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 C7orf57Q8NEG2 295 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 NLGN4YQ8NFZ3 816 aaPredicted RBP5.56□□□□□ -1.52
USP39-213ENST00000467885 OR7G2Q8NG99 324 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 OR2Y1Q8NGV0 311 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 DNAJB8Q8NHS0 232 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 ADAMTS18Q8TE60 1221 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 ZFP90Q8TF47 636 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 CT55Q8WUE5 264 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 KAT2AQ92830 837 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 TSLPQ969D9 159 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 FKBP10Q96AY3 582 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 ROPN1LQ96C74 230 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 KLHL29Q96CT2 875 aa5.56□□□□□ -1.52
USP39-213ENST00000467885 FAM122AQ96E09 287 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms