RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR49, Length 165 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR49	snR49	LYP1	P32487	611 aa		3.08	□□□□□ -1.92
snR49	snR49	MOT2	P34909	587 aa	Known RBP	3.08	□□□□□ -1.92
snR49	snR49	MTH1	P35198	433 aa		3.08	□□□□□ -1.92
snR49	snR49	GND2	P53319	492 aa		3.08	□□□□□ -1.92
snR49	snR49	MUK1	Q02866	612 aa		3.08	□□□□□ -1.92
snR49	snR49	TMA46	Q12000	345 aa	Known RBP	3.08	□□□□□ -1.92
snR49	snR49	UPC2	Q12151	913 aa		3.08	□□□□□ -1.92
snR49	snR49	TRM13	Q12383	476 aa		3.08	□□□□□ -1.92
snR49	snR49	TRP2	P00899	507 aa	Known RBP	3.07	□□□□□ -1.92
snR49	snR49	DUT1	P33317	147 aa		3.07	□□□□□ -1.92
snR49	snR49	ATG19	P35193	415 aa		3.07	□□□□□ -1.92
snR49	snR49	NPP2	P39997	493 aa		3.07	□□□□□ -1.92
snR49	snR49	FYV10	P40492	516 aa		3.07	□□□□□ -1.92
snR49	snR49	SEN54	Q02825	467 aa	Predicted RBP	3.07	□□□□□ -1.92
snR49	snR49	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
snR49	snR49	ALG7	P07286	448 aa		3.06	□□□□□ -1.92
snR49	snR49	INO1	P11986	533 aa		3.06	□□□□□ -1.92
snR49	snR49	STE14	P32584	239 aa		3.06	□□□□□ -1.92
snR49	snR49	SPC42	P36094	363 aa		3.06	□□□□□ -1.92
snR49	snR49	YGL176C	P46945	554 aa		3.06	□□□□□ -1.92
snR49	snR49	YJR107W	P47145	328 aa		3.06	□□□□□ -1.92
snR49	snR49	SFB2	P53953	876 aa		3.06	□□□□□ -1.92
snR49	snR49	ERG5	P54781	538 aa		3.06	□□□□□ -1.92
snR49	snR49	RNT1	Q02555	471 aa		3.06	□□□□□ -1.92
snR49	snR49	SLU7	Q02775	382 aa	Known RBP	3.06	□□□□□ -1.92
snR49	snR49	EEB1	Q02891	456 aa		3.06	□□□□□ -1.92
snR49	snR49	RKM4	Q12504	494 aa		3.06	□□□□□ -1.92
snR49	snR49	PPR1	P07272	904 aa	Predicted RBP	3.05	□□□□□ -1.92
snR49	snR49	ATE1	P16639	503 aa		3.05	□□□□□ -1.92
snR49	snR49	MGE1	P38523	228 aa		3.05	□□□□□ -1.92
snR49	snR49	TYW3	P53177	273 aa		3.05	□□□□□ -1.92
snR49	snR49	TIM44	Q01852	431 aa		3.05	□□□□□ -1.92
snR49	snR49	ESF1	Q06344	628 aa	Known RBP	3.05	□□□□□ -1.92
snR49	snR49	POL32	P47110	350 aa		3.04	□□□□□ -1.92
snR49	snR49	YLR225C	Q05948	407 aa	Known RBP	3.04	□□□□□ -1.92
snR49	snR49	NDJ1	Q12366	352 aa		3.04	□□□□□ -1.92
snR49	snR49	SED4	P25365	1065 aa		3.03	□□□□□ -1.92
snR49	snR49	YKL107W	P34251	309 aa		3.03	□□□□□ -1.92
snR49	snR49	SAH1	P39954	449 aa	Known RBP	3.03	□□□□□ -1.92
snR49	snR49	YER158C	P40095	573 aa		3.03	□□□□□ -1.92
snR49	snR49	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
snR49	snR49	PEX2	P32800	271 aa		3.02	□□□□□ -1.93
snR49	snR49	CDC34	P14682	295 aa		3.01	□□□□□ -1.93
snR49	snR49	SLD2	P34252	453 aa		3.01	□□□□□ -1.93
snR49	snR49	SDS3	P40505	327 aa		3.01	□□□□□ -1.93
snR49	snR49	SUT2	Q12286	268 aa		3.01	□□□□□ -1.93
snR49	snR49	RPC82	P32349	654 aa		3	□□□□□ -1.93
snR49	snR49	PPS1	P38148	807 aa		3	□□□□□ -1.93
snR49	snR49	ESC2	Q06340	456 aa		3	□□□□□ -1.93
snR49	snR49	RRP15	Q06511	250 aa	Predicted RBP	3	□□□□□ -1.93
snR49	snR49	MRH1	Q12117	320 aa	Predicted RBP	3	□□□□□ -1.93
snR49	snR49	CDC12	P32468	407 aa	Known RBP	2.99	□□□□□ -1.93
snR49	snR49	GYP7	P48365	746 aa		2.99	□□□□□ -1.93
snR49	snR49	RAI1	P53063	387 aa	Known RBP	2.99	□□□□□ -1.93
snR49	snR49	HBT1	Q07653	1046 aa	Known RBP	2.99	□□□□□ -1.93
snR49	snR49	FRE5	Q08908	694 aa		2.99	□□□□□ -1.93
snR49	snR49	BNR1	P40450	1375 aa		2.99	□□□□□ -1.93
snR49	snR49	MDM10	P18409	493 aa		2.98	□□□□□ -1.93
snR49	snR49	SEC21	P32074	935 aa	Known RBP	2.98	□□□□□ -1.93
snR49	snR49	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
snR49	snR49	MET10	P39692	1035 aa		2.98	□□□□□ -1.93
snR49	snR49	SRP1	Q02821	542 aa	Known RBP	2.98	□□□□□ -1.93
snR49	snR49	SSL1	Q04673	461 aa	Predicted RBP	2.98	□□□□□ -1.93
snR49	snR49	YPR196W	Q06595	470 aa		2.98	□□□□□ -1.93
snR49	snR49	PEX19	Q07418	342 aa		2.98	□□□□□ -1.93
snR49	snR49	YHL017W	P38745	532 aa		2.97	□□□□□ -1.93
snR49	snR49	MBP1	P39678	833 aa		2.97	□□□□□ -1.93
snR49	snR49	RMD1	Q03441	430 aa		2.97	□□□□□ -1.93
snR49	snR49	SPO20	Q04359	397 aa		2.97	□□□□□ -1.93
snR49	snR49	NOT3	P06102	836 aa	Known RBP	2.96	□□□□□ -1.94
snR49	snR49	FBP1	P09201	348 aa		2.96	□□□□□ -1.94
snR49	snR49	PPZ2	P33329	710 aa		2.96	□□□□□ -1.94
snR49	snR49	CTF13	P35203	478 aa		2.96	□□□□□ -1.94
snR49	snR49	TDP1	P38319	544 aa		2.96	□□□□□ -1.94
snR49	snR49	AFT2	Q08957	416 aa		2.96	□□□□□ -1.94
snR49	snR49	TUB3	P09734	445 aa	Known RBP	2.95	□□□□□ -1.94
snR49	snR49	ABD1	P32783	436 aa	Predicted RBP	2.95	□□□□□ -1.94
snR49	snR49	PET112	P33893	541 aa		2.95	□□□□□ -1.94
snR49	snR49	YKR078W	P36158	585 aa	Known RBP	2.95	□□□□□ -1.94
snR49	snR49	TSL1	P38427	1098 aa	Known RBP	2.95	□□□□□ -1.94
snR49	snR49	RIX1	P38883	763 aa	Predicted RBP	2.95	□□□□□ -1.94
snR49	snR49	SNF7	P39929	240 aa	Known RBP	2.95	□□□□□ -1.94
snR49	snR49	ELO3	P40319	345 aa		2.95	□□□□□ -1.94
snR49	snR49	TAH11	P47112	604 aa		2.95	□□□□□ -1.94
snR49	snR49	YKE2	P52553	114 aa		2.95	□□□□□ -1.94
snR49	snR49	IMO32	P53219	342 aa		2.95	□□□□□ -1.94
snR49	snR49	DLT1	Q04216	342 aa		2.95	□□□□□ -1.94
snR49	snR49	ADY4	Q05955	493 aa		2.95	□□□□□ -1.94
snR49	snR49	DUS3	Q06053	668 aa	Known RBP	2.95	□□□□□ -1.94
snR49	snR49	MET3	P08536	511 aa		2.94	□□□□□ -1.94
snR49	snR49	TUB1	P09733	447 aa	Known RBP	2.94	□□□□□ -1.94
snR49	snR49	STE13	P33894	931 aa		2.94	□□□□□ -1.94
snR49	snR49	FLO10	P36170	1169 aa		2.94	□□□□□ -1.94
snR49	snR49	YBR238C	P38330	731 aa	Known RBP	2.94	□□□□□ -1.94
snR49	snR49	SDP1	P40479	209 aa		2.94	□□□□□ -1.94
snR49	snR49	DAS1	P47005	663 aa		2.94	□□□□□ -1.94
snR49	snR49	VPS73	P53142	486 aa	Known RBP	2.94	□□□□□ -1.94
snR49	snR49	YGR053C	P53234	283 aa		2.94	□□□□□ -1.94
snR49	snR49	COQ11	Q05892	277 aa		2.94	□□□□□ -1.94
snR49	snR49	TRM11	Q12463	433 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms