RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W YLR422WQ06409 1932 aa11.43□□□□□ -0.58
MSF1YPR047W ADE4P04046 510 aaKnown RBP11.43□□□□□ -0.58
MSF1YPR047W RPL19AP0CX82 189 aaKnown RBP11.43□□□□□ -0.58
MSF1YPR047W RPL19BP0CX83 189 aaPredicted RBP11.43□□□□□ -0.58
MSF1YPR047W DBP5P20449 482 aaKnown RBP11.43□□□□□ -0.58
MSF1YPR047W COT1P32798 439 aa11.43□□□□□ -0.58
MSF1YPR047W RFC5P38251 354 aa11.43□□□□□ -0.58
MSF1YPR047W PIH1P38768 344 aa11.43□□□□□ -0.58
MSF1YPR047W ADY4Q05955 493 aa11.43□□□□□ -0.58
MSF1YPR047W IES4Q08561 116 aa11.43□□□□□ -0.58
MSF1YPR047W OSW2Q12202 724 aa11.43□□□□□ -0.58
MSF1YPR047W PTC5Q12511 572 aa11.43□□□□□ -0.58
MSF1YPR047W GLN3P18494 730 aa11.42□□□□□ -0.58
MSF1YPR047W SEC21P32074 935 aaKnown RBP11.42□□□□□ -0.58
MSF1YPR047W APM2P38700 605 aa11.42□□□□□ -0.58
MSF1YPR047W YHR202WP38887 602 aa11.42□□□□□ -0.58
MSF1YPR047W MMF1P40185 145 aaKnown RBP11.42□□□□□ -0.58
MSF1YPR047W YNL146WP53906 100 aa11.42□□□□□ -0.58
MSF1YPR047W PIG1Q06216 648 aa11.42□□□□□ -0.58
MSF1YPR047W YOR022CQ12204 715 aa11.42□□□□□ -0.58
MSF1YPR047W YEL076C-AP0CX16 216 aa11.41□□□□□ -0.58
MSF1YPR047W YLR464WP0CX17 216 aa11.41□□□□□ -0.58
MSF1YPR047W MBR1P23493 339 aa11.41□□□□□ -0.58
MSF1YPR047W ERC1P38767 581 aa11.41□□□□□ -0.58
MSF1YPR047W YEL076CP39971 216 aa11.41□□□□□ -0.58
MSF1YPR047W MNP1P53163 194 aaPredicted RBP11.41□□□□□ -0.58
MSF1YPR047W PIL1P53252 339 aaKnown RBP11.41□□□□□ -0.58
MSF1YPR047W RAD59Q12223 238 aa11.41□□□□□ -0.58
MSF1YPR047W TTI1P36097 1038 aa11.4□□□□□ -0.58
MSF1YPR047W SPP1Q03012 353 aa11.4□□□□□ -0.58
MSF1YPR047W YPL150WQ12152 901 aa11.4□□□□□ -0.58
MSF1YPR047W CPA2P03965 1118 aaKnown RBP11.39□□□□□ -0.59
MSF1YPR047W CKA2P19454 339 aa11.39□□□□□ -0.59
MSF1YPR047W RPC53P25441 422 aa11.39□□□□□ -0.59
MSF1YPR047W SKG6P32900 734 aaPredicted RBP11.39□□□□□ -0.59
MSF1YPR047W NUP82P40368 713 aa11.39□□□□□ -0.59
MSF1YPR047W CAF130P53280 1122 aaPredicted RBP11.39□□□□□ -0.59
MSF1YPR047W FAR11P53917 953 aa11.39□□□□□ -0.59
MSF1YPR047W ARK1P53974 638 aa11.39□□□□□ -0.59
MSF1YPR047W COX4P04037 155 aa11.38□□□□□ -0.59
MSF1YPR047W PFK1P16861 987 aaKnown RBP11.38□□□□□ -0.59
MSF1YPR047W RSA4P25382 515 aaKnown RBP11.38□□□□□ -0.59
MSF1YPR047W BIO2P32451 375 aa11.38□□□□□ -0.59
MSF1YPR047W RPT1P33299 467 aaKnown RBP11.38□□□□□ -0.59
MSF1YPR047W PET10P36139 283 aa11.38□□□□□ -0.59
MSF1YPR047W CCL1P37366 393 aa11.38□□□□□ -0.59
MSF1YPR047W MRX3P38172 270 aa11.38□□□□□ -0.59
MSF1YPR047W VID24P38263 362 aa11.38□□□□□ -0.59
MSF1YPR047W CCC2P38995 1004 aa11.38□□□□□ -0.59
MSF1YPR047W XDJ1P39102 459 aa11.38□□□□□ -0.59
MSF1YPR047W ISM1P48526 1002 aa11.38□□□□□ -0.59
MSF1YPR047W CUL3P53202 744 aa11.38□□□□□ -0.59
MSF1YPR047W YDR090CQ03193 310 aa11.38□□□□□ -0.59
MSF1YPR047W SCP160P06105 1222 aaKnown RBP RIP-Chip data11.37□□□□□ -0.59not detected
MSF1YPR047W TOM70P07213 617 aaKnown RBP11.37□□□□□ -0.59
MSF1YPR047W PGI1P12709 554 aaKnown RBP11.37□□□□□ -0.59
MSF1YPR047W COQ8P27697 501 aa11.37□□□□□ -0.59
MSF1YPR047W RAM2P29703 316 aa11.37□□□□□ -0.59
MSF1YPR047W VPS35P34110 944 aa11.37□□□□□ -0.59
MSF1YPR047W PGM2P37012 569 aaKnown RBP11.37□□□□□ -0.59
MSF1YPR047W UBA2P52488 636 aa11.37□□□□□ -0.59
MSF1YPR047W ECM7Q06200 448 aa11.37□□□□□ -0.59
MSF1YPR047W MRN1Q08925 612 aaKnown RBP RIP-Chip data11.37□□□□□ -0.59not detected
MSF1YPR047W RPC31P17890 251 aa11.36□□□□□ -0.59
MSF1YPR047W GCS1P35197 352 aa11.36□□□□□ -0.59
MSF1YPR047W YIR016WP40572 265 aa11.36□□□□□ -0.59
MSF1YPR047W GUP1P53154 560 aa11.36□□□□□ -0.59
MSF1YPR047W MNL2Q12205 849 aa11.36□□□□□ -0.59
MSF1YPR047W PKH2Q12236 1081 aaKnown RBP11.36□□□□□ -0.59
MSF1YPR047W ZPS1Q12512 249 aa11.36□□□□□ -0.59
MSF1YPR047W HUL4P40985 892 aa11.35□□□□□ -0.59
MSF1YPR047W THI6P41835 540 aa11.35□□□□□ -0.59
MSF1YPR047W ENV11P53246 860 aa11.35□□□□□ -0.59
MSF1YPR047W MRI1Q06489 411 aaKnown RBP11.35□□□□□ -0.59
MSF1YPR047W ESC8Q08119 714 aa11.35□□□□□ -0.59
MSF1YPR047W HEL1P36113 551 aa11.35□□□□□ -0.59
MSF1YPR047W DSF2P38213 736 aa11.35□□□□□ -0.59
MSF1YPR047W DAK2P43550 591 aa11.35□□□□□ -0.59
MSF1YPR047W YJL045WP47052 634 aa11.35□□□□□ -0.59
MSF1YPR047W YLR257WQ06146 321 aaKnown RBP11.35□□□□□ -0.59
MSF1YPR047W RGP1P16664 663 aa11.34□□□□□ -0.59
MSF1YPR047W ISY1P21374 235 aaPredicted RBP11.34□□□□□ -0.59
MSF1YPR047W PPZ1P26570 692 aa11.34□□□□□ -0.59
MSF1YPR047W URA1P28272 314 aaPredicted RBP11.34□□□□□ -0.59
MSF1YPR047W NAM7P30771 971 aaKnown RBP11.34□□□□□ -0.59
MSF1YPR047W YSC83P32792 385 aa11.34□□□□□ -0.59
MSF1YPR047W YER186CP40101 306 aa11.34□□□□□ -0.59
MSF1YPR047W TAM41P53230 385 aa11.34□□□□□ -0.59
MSF1YPR047W VTC3Q02725 835 aa11.34□□□□□ -0.59
MSF1YPR047W TRS130Q03660 1102 aa11.34□□□□□ -0.59
MSF1YPR047W VPS20Q04272 221 aa11.34□□□□□ -0.59
MSF1YPR047W DNL4Q08387 944 aaPredicted RBP11.34□□□□□ -0.59
MSF1YPR047W FOB1O13329 566 aa11.33□□□□□ -0.6
MSF1YPR047W SNF1P06782 633 aaKnown RBP11.33□□□□□ -0.6
MSF1YPR047W SSD1P24276 1250 aaKnown RBP RIP-Chip data11.33□□□□□ -0.6not detected
MSF1YPR047W MAL33P38157 468 aa11.33□□□□□ -0.6
MSF1YPR047W YEL023CP39992 682 aa11.33□□□□□ -0.6
MSF1YPR047W MAF1P41910 395 aa11.33□□□□□ -0.6
MSF1YPR047W YGR130CP53278 816 aa11.33□□□□□ -0.6
MSF1YPR047W TOF1P53840 1238 aa11.33□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms