RNA–Protein interactions for RNA: YPL180W

TCO89, Transcript of Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p), yeast

Gene TCO89, Length 2,400 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCO89	YPL180W	KAR2	P16474	682 aa	Known RBP	4.27	□□□□□ -1.73
TCO89	YPL180W	TRX1	P22217	103 aa	Known RBP	4.27	□□□□□ -1.73
TCO89	YPL180W	TRZ1	P36159	838 aa	Predicted RBP	4.27	□□□□□ -1.73
TCO89	YPL180W	LRP1	P38801	184 aa	Known RBP	4.27	□□□□□ -1.73
TCO89	YPL180W	TMA108	P40462	946 aa		4.27	□□□□□ -1.73
TCO89	YPL180W	ROK1	P45818	564 aa	Predicted RBP	4.27	□□□□□ -1.73
TCO89	YPL180W	UBP15	P50101	1230 aa		4.27	□□□□□ -1.73
TCO89	YPL180W	UBX4	P54730	416 aa		4.27	□□□□□ -1.73
TCO89	YPL180W	PLP1	Q04004	230 aa		4.27	□□□□□ -1.73
TCO89	YPL180W	BUD7	Q08754	746 aa		4.27	□□□□□ -1.73
TCO89	YPL180W	REX3	Q12090	404 aa		4.27	□□□□□ -1.73
TCO89	YPL180W	CHS5	Q12114	671 aa	Known RBP	4.27	□□□□□ -1.73
TCO89	YPL180W	APC11	Q12157	165 aa		4.27	□□□□□ -1.73
TCO89	YPL180W	MAK21	Q12176	1025 aa	Known RBP	4.27	□□□□□ -1.73
TCO89	YPL180W	ERG12	P07277	443 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	TIF1	P10081	395 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	MRPS28	P21771	286 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	CDC10	P25342	322 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	DAL1	P32375	460 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	TIF4631	P39935	952 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	PSY2	P40164	858 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	YJR061W	P40355	935 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	RLP7	P40693	322 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	ZIM17	P42844	174 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	EMP47	P43555	445 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	EPL1	P43572	832 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	URB2	P47108	1174 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	LYS4	P49367	693 aa	Predicted RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	MPS2	P53159	387 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	ALD6	P54115	500 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	GCR2	Q01722	534 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	RPM2	Q02773	1202 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	YML108W	Q03759	105 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	YML083C	Q04526	418 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	VAM6	Q07468	1049 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	ACF2	Q12168	779 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	MED4	Q12343	284 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	XRN1	P22147	1528 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	CTT1	P06115	562 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	HOM2	P13663	365 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	YAP1	P19880	650 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	HSP60	P19882	572 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	DIT2	P21595	489 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	IMP2'	P32351	346 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	SSO1	P32867	290 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	TFC4	P33339	1025 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	CUE2	P36075	443 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	STV1	P37296	890 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	MBP1	P39678	833 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	VPS8	P39702	1274 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	ROG3	P43602	733 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	YJR107W	P47145	328 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	SGM1	P47166	707 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	IPI3	P53877	555 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	TSR1	Q07381	788 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	YDL124W	Q07551	312 aa	Known RBP	4.26	□□□□□ -1.73
TCO89	YPL180W	SMC4	Q12267	1418 aa		4.26	□□□□□ -1.73
TCO89	YPL180W	AI2	P03876	854 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	FUS1	P11710	512 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	PRP6	P19735	899 aa	Predicted RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	MSH1	P25846	959 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	NAM7	P30771	971 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	FBP26	P32604	452 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	SLA2	P33338	968 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	VPS51	P36116	164 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	BOI1	P38041	980 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	SIP3	P38717	1229 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	GPD2	P41911	440 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	SBE2	P42223	864 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	BNA6	P43619	295 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	STU2	P46675	888 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	YGR266W	P53326	701 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	RET3	P53600	189 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	YNL193W	P53870	558 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	PHO92	Q06390	306 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	REH1	Q06709	432 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	TRM8	Q12009	286 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	BUG1	Q12191	341 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	YBL113C	Q7M4S9	792 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	HIS3	P06633	220 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	STE3	P06783	470 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	SRM1	P21827	482 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	MEI4	P29467	408 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	MGM1	P32266	881 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	NIP1	P32497	812 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	ATP3	P38077	311 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	ALG14	P38242	237 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	RFC1	P38630	861 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	SAK1	P38990	1142 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	GEM1	P39722	662 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	ZRG8	P40021	1076 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	JEM1	P40358	645 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	NEO1	P40527	1151 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	PKP1	P40530	394 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	MDE1	P47095	244 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	YML6	P51998	286 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	COP1	P53622	1201 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	BET4	Q00618	327 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	IVY1	Q04934	453 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	NOP6	Q07623	225 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 89.9 ms