RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	IML2	P47031	731 aa		5.12	□□□□□ -1.59
TRE1	YPL176C	UBP15	P50101	1230 aa		5.12	□□□□□ -1.59
TRE1	YPL176C	SKP1	P52286	194 aa		5.12	□□□□□ -1.59
TRE1	YPL176C	CUS1	Q02554	436 aa	Predicted RBP	5.12	□□□□□ -1.59
TRE1	YPL176C	INP54	Q08227	384 aa	Known RBP	5.12	□□□□□ -1.59
TRE1	YPL176C	YOR296W	Q08748	1289 aa		5.12	□□□□□ -1.59
TRE1	YPL176C	SCM3	Q12334	223 aa		5.12	□□□□□ -1.59
TRE1	YPL176C	RED1	P14291	827 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	POL4	P25615	582 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	RAD16	P31244	790 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	ABD1	P32783	436 aa	Predicted RBP	5.11	□□□□□ -1.59
TRE1	YPL176C	RAD55	P38953	406 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	VPS41	P38959	992 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	ROG3	P43602	733 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	GTR1	Q00582	310 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	EIS1	Q05050	843 aa	Known RBP	5.11	□□□□□ -1.59
TRE1	YPL176C	GLK1	P17709	500 aa	Known RBP	5.11	□□□□□ -1.59
TRE1	YPL176C	MCM5	P29496	775 aa	Known RBP	5.11	□□□□□ -1.59
TRE1	YPL176C	GIP1	P38229	639 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	AMN1	P38285	549 aa	Predicted RBP	5.11	□□□□□ -1.59
TRE1	YPL176C	YTA6	P40328	754 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	NIT2	P47016	307 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	UPF3	P48412	387 aa	Known RBP	5.11	□□□□□ -1.59
TRE1	YPL176C	NAM8	Q00539	523 aa	Known RBP	5.11	□□□□□ -1.59
TRE1	YPL176C	TAF11	Q04226	346 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	BRE4	Q07660	1125 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	TY1A-BL	Q12266	440 aa		5.11	□□□□□ -1.59
TRE1	YPL176C	CCT8	P47079	568 aa	Known RBP	5.1	□□□□□ -1.59
TRE1	YPL176C	YML6	P51998	286 aa		5.1	□□□□□ -1.59
TRE1	YPL176C	CIA1	Q05583	330 aa		5.1	□□□□□ -1.59
TRE1	YPL176C	AVO1	Q08236	1176 aa		5.1	□□□□□ -1.59
TRE1	YPL176C	RRG1	Q12167	365 aa	Predicted RBP	5.1	□□□□□ -1.59
TRE1	YPL176C	DNF1	P32660	1571 aa		5.1	□□□□□ -1.59
TRE1	YPL176C	OSH7	P38755	437 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	PSY2	P40164	858 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	YIL166C	P40445	542 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	YAP1802	P53309	568 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	CTR9	P89105	1077 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	UBP2	Q01476	1272 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	VTC3	Q02725	835 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	TDA9	Q04545	1251 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	RNH1	Q04740	348 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	YCS4	Q06156	1176 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	EMG1	Q06287	252 aa	Known RBP	5.09	□□□□□ -1.59
TRE1	YPL176C	ESC8	Q08119	714 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	SPO21	Q12411	609 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	DPH6	Q12429	685 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	MRP7	P12687	371 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	PRP5	P21372	849 aa	Predicted RBP	5.09	□□□□□ -1.59
TRE1	YPL176C	AEP2	P22136	580 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	PET309	P32522	965 aa	Predicted RBP	5.09	□□□□□ -1.59
TRE1	YPL176C	SPC29	P33419	253 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	IRS4	P36115	615 aa	Known RBP	5.09	□□□□□ -1.59
TRE1	YPL176C	NPR3	P38742	1146 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	DSS1	P39112	969 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	ALR2	P43553	858 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	DUG1	P43616	481 aa	Known RBP	5.09	□□□□□ -1.59
TRE1	YPL176C	GNP1	P48813	663 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	ARA2	Q04212	335 aa		5.09	□□□□□ -1.59
TRE1	YPL176C	HSH49	Q99181	213 aa	Predicted RBP	5.09	□□□□□ -1.59
TRE1	YPL176C	HSL1	P34244	1518 aa		5.09	□□□□□ -1.6
TRE1	YPL176C	BNI1	P41832	1953 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	COB	P00163	385 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	TUF1	P02992	437 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	PGS1	P25578	521 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	VBA3	P25594	458 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	PBY1	P38254	753 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	UBS1	P38290	277 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	OCA1	P50946	238 aa	Predicted RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	YNR040W	P53736	256 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	CAF120	P53836	1060 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	ADI1	Q03677	179 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	YMR018W	Q04364	514 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	YKU80	Q04437	629 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	YLR287C	Q05881	355 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	LCB5	Q06147	687 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	RGA2	Q06407	1009 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	YDL124W	Q07551	312 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	TMA46	Q12000	345 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	IRC20	Q06554	1556 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	FUR1	P18562	216 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	SBA1	P28707	216 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	PIM1	P36775	1133 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	GLY1	P37303	387 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	TPA1	P40032	644 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	JEM1	P40358	645 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	MET13	P53128	600 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	KRE33	P53914	1056 aa	Known RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	ULP1	Q02724	621 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	RRP36	Q12481	300 aa	Predicted RBP	5.08	□□□□□ -1.6
TRE1	YPL176C	LTE1	P07866	1435 aa		5.08	□□□□□ -1.6
TRE1	YPL176C	TRP2	P00899	507 aa	Known RBP	5.07	□□□□□ -1.6
TRE1	YPL176C	APN1	P22936	367 aa		5.07	□□□□□ -1.6
TRE1	YPL176C	DAL3	P32459	195 aa		5.07	□□□□□ -1.6
TRE1	YPL176C	IME2	P32581	645 aa		5.07	□□□□□ -1.6
TRE1	YPL176C	MUD2	P36084	527 aa	Known RBP	5.07	□□□□□ -1.6
TRE1	YPL176C	FIR1	P40020	876 aa		5.07	□□□□□ -1.6
TRE1	YPL176C	QRI7	P43122	407 aa		5.07	□□□□□ -1.6
TRE1	YPL176C	RBG2	P53295	368 aa	Known RBP	5.07	□□□□□ -1.6
TRE1	YPL176C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms