RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YKT6P36015 200 aaKnown RBP10.39□□□□□ -0.75
SSN3YPL042C EFM2P38347 419 aa10.39□□□□□ -0.75
SSN3YPL042C VPS41P38959 992 aa10.39□□□□□ -0.75
SSN3YPL042C YER034WP40022 185 aaKnown RBP10.39□□□□□ -0.75
SSN3YPL042C DAK2P43550 591 aa10.39□□□□□ -0.75
SSN3YPL042C LCD1Q04377 747 aa10.39□□□□□ -0.75
SSN3YPL042C EIS1Q05050 843 aaKnown RBP10.39□□□□□ -0.75
SSN3YPL042C SPP382Q06411 708 aaPredicted RBP10.39□□□□□ -0.75
SSN3YPL042C YLR352WQ06479 807 aa10.39□□□□□ -0.75
SSN3YPL042C PMT7Q06644 662 aa10.39□□□□□ -0.75
SSN3YPL042C RPL22AP05749 121 aaKnown RBP10.38□□□□□ -0.75
SSN3YPL042C THR4P16120 514 aaKnown RBP10.38□□□□□ -0.75
SSN3YPL042C RPB4P20433 221 aaPredicted RBP10.38□□□□□ -0.75
SSN3YPL042C MRPL25P23369 157 aa10.38□□□□□ -0.75
SSN3YPL042C RIM101P33400 625 aa10.38□□□□□ -0.75
SSN3YPL042C MMR1Q06324 491 aa10.38□□□□□ -0.75
SSN3YPL042C HMG1P12683 1054 aa10.38□□□□□ -0.75
SSN3YPL042C PHO84P25297 587 aaKnown RBP10.38□□□□□ -0.75
SSN3YPL042C ECM32P32644 1121 aaKnown RBP10.38□□□□□ -0.75
SSN3YPL042C OTU2P38747 307 aaKnown RBP10.38□□□□□ -0.75
SSN3YPL042C STT3P39007 718 aaKnown RBP10.38□□□□□ -0.75
SSN3YPL042C MNN1P39106 762 aa10.38□□□□□ -0.75
SSN3YPL042C IRR1P40541 1150 aa10.38□□□□□ -0.75
SSN3YPL042C YJL007CP47080 104 aa10.38□□□□□ -0.75
SSN3YPL042C BTN2P53286 410 aa10.38□□□□□ -0.75
SSN3YPL042C HST2P53686 357 aa10.38□□□□□ -0.75
SSN3YPL042C RTC4P53850 401 aa10.38□□□□□ -0.75
SSN3YPL042C FAP1P53971 965 aa10.38□□□□□ -0.75
SSN3YPL042C TUF1P02992 437 aaKnown RBP10.37□□□□□ -0.75
SSN3YPL042C TOM70P07213 617 aaKnown RBP10.37□□□□□ -0.75
SSN3YPL042C ATE1P16639 503 aa10.37□□□□□ -0.75
SSN3YPL042C VAC8P39968 578 aa10.37□□□□□ -0.75
SSN3YPL042C SDS3P40505 327 aa10.37□□□□□ -0.75
SSN3YPL042C LYS14P40971 790 aa10.37□□□□□ -0.75
SSN3YPL042C TRS120Q04183 1289 aa10.37□□□□□ -0.75
SSN3YPL042C SGD1Q06132 899 aa10.37□□□□□ -0.75
SSN3YPL042C YOR378WQ08902 515 aa10.37□□□□□ -0.75
SSN3YPL042C BMH1P29311 267 aaKnown RBP10.36□□□□□ -0.75
SSN3YPL042C GCD6P32501 712 aaKnown RBP10.36□□□□□ -0.75
SSN3YPL042C STO1P34160 861 aaKnown RBP10.36□□□□□ -0.75
SSN3YPL042C JJJ1P53863 590 aa10.36□□□□□ -0.75
SSN3YPL042C SPO20Q04359 397 aa10.36□□□□□ -0.75
SSN3YPL042C ATG26Q06321 1198 aa10.36□□□□□ -0.75
SSN3YPL042C SLK19Q08581 821 aaKnown RBP10.36□□□□□ -0.75
SSN3YPL042C RAD27P26793 382 aa10.35□□□□□ -0.75
SSN3YPL042C UBP14P38237 781 aaKnown RBP10.35□□□□□ -0.75
SSN3YPL042C RRM3P38766 723 aa10.35□□□□□ -0.75
SSN3YPL042C LAM1P38851 1228 aa10.35□□□□□ -0.75
SSN3YPL042C PNT1P38969 423 aa10.35□□□□□ -0.75
SSN3YPL042C CIT3P43635 486 aa10.35□□□□□ -0.75
SSN3YPL042C YGR153WP48238 217 aa10.35□□□□□ -0.75
SSN3YPL042C RRT6P53117 311 aaPredicted RBP10.35□□□□□ -0.75
SSN3YPL042C DSE4P53753 1117 aa10.35□□□□□ -0.75
SSN3YPL042C DSL1P53847 754 aa10.35□□□□□ -0.75
SSN3YPL042C SNZ1Q03148 297 aa10.35□□□□□ -0.75
SSN3YPL042C YML037CQ03703 340 aa10.35□□□□□ -0.75
SSN3YPL042C SWA2Q06677 668 aa10.35□□□□□ -0.75
SSN3YPL042C HIS4P00815 799 aaKnown RBP10.34□□□□□ -0.75
SSN3YPL042C SWI6P09959 803 aa10.34□□□□□ -0.75
SSN3YPL042C OCT1P35999 772 aa10.34□□□□□ -0.75
SSN3YPL042C PHO88P38264 188 aaPredicted RBP10.34□□□□□ -0.75
SSN3YPL042C CSM3Q04659 317 aa10.34□□□□□ -0.75
SSN3YPL042C ARR1Q06596 294 aa10.34□□□□□ -0.75
SSN3YPL042C YPL191CQ08930 360 aa10.34□□□□□ -0.75
SSN3YPL042C TYW1Q08960 810 aaKnown RBP10.34□□□□□ -0.75
SSN3YPL042C SRO9P25567 434 aaKnown RBP10.34□□□□□ -0.75
SSN3YPL042C MRPL10P36520 322 aa10.34□□□□□ -0.75
SSN3YPL042C PAN5P38787 379 aa10.34□□□□□ -0.75
SSN3YPL042C BFR1P38934 470 aaKnown RBP RIP-Chip data10.34□□□□□ -0.75not detected
SSN3YPL042C YTA6P40328 754 aa10.34□□□□□ -0.75
SSN3YPL042C YIL089WP40500 205 aa10.34□□□□□ -0.75
SSN3YPL042C FMS1P50264 508 aa10.34□□□□□ -0.75
SSN3YPL042C PEX29Q03370 554 aa10.34□□□□□ -0.75
SSN3YPL042C RAD33Q04231 177 aa10.34□□□□□ -0.75
SSN3YPL042C FBP1P09201 348 aa10.33□□□□□ -0.76
SSN3YPL042C RAD18P10862 487 aa10.33□□□□□ -0.76
SSN3YPL042C MEF1P25039 761 aa10.33□□□□□ -0.76
SSN3YPL042C MRE11P32829 692 aa10.33□□□□□ -0.76
SSN3YPL042C COY1P34237 679 aa10.33□□□□□ -0.76
SSN3YPL042C MTC2P34246 357 aa10.33□□□□□ -0.76
SSN3YPL042C NDT80P38830 627 aa10.33□□□□□ -0.76
SSN3YPL042C RTT105P40063 208 aa10.33□□□□□ -0.76
SSN3YPL042C SSL2Q00578 843 aa10.33□□□□□ -0.76
SSN3YPL042C HEH2Q03281 663 aa10.33□□□□□ -0.76
SSN3YPL042C YLR326WQ06170 240 aaKnown RBP10.33□□□□□ -0.76
SSN3YPL042C CSR1Q06705 408 aaKnown RBP10.33□□□□□ -0.76
SSN3YPL042C MDM38Q08179 573 aa10.33□□□□□ -0.76
SSN3YPL042C KAR3P17119 729 aa10.32□□□□□ -0.76
SSN3YPL042C PGS1P25578 521 aa10.32□□□□□ -0.76
SSN3YPL042C GSY2P27472 705 aa10.32□□□□□ -0.76
SSN3YPL042C PEX6P33760 1030 aa10.32□□□□□ -0.76
SSN3YPL042C ATP22P50273 684 aaPredicted RBP10.32□□□□□ -0.76
SSN3YPL042C PEX8P53248 589 aa10.32□□□□□ -0.76
SSN3YPL042C SDA1P53313 767 aaKnown RBP10.32□□□□□ -0.76
SSN3YPL042C DBP9Q06218 594 aaKnown RBP10.32□□□□□ -0.76
SSN3YPL042C PER1P25625 357 aa10.31□□□□□ -0.76
SSN3YPL042C SUL1P38359 859 aa10.31□□□□□ -0.76
SSN3YPL042C AIM33Q04516 312 aa10.31□□□□□ -0.76
SSN3YPL042C ARR2Q06597 130 aa10.31□□□□□ -0.76
SSN3YPL042C RTP1Q12751 981 aa10.31□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms