RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	LEU1	P07264	779 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	RAD2	P07276	1031 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	SNA3	P14359	133 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	SAM2	P19358	384 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	DAL1	P32375	460 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	KAP122	P32767	1081 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	SMC1	P32908	1225 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	KTR3	P38130	404 aa	Predicted RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	OSH3	P38713	996 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	VAC8	P39968	578 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	DLD3	P39976	496 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	BSC2	Q05611	235 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	SPH1	Q06160	661 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	PIN2	Q12057	282 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	TRM11	Q12463	433 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	FLP1	P03870	423 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	NOT3	P06102	836 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	TKL1	P23254	680 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.82	□□□□□ -1.96	not detected
VTC3	YPL019C	DUT1	P33317	147 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	TGL1	P34163	548 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	SHP1	P34223	423 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	MCR1	P36060	302 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	YJR115W	P47152	169 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	YNR040W	P53736	256 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	ALO1	P54783	526 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	ERP3	Q12403	225 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	RVB2	Q12464	471 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	TOR2	P32600	2474 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	MYO1	P08964	1928 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	TY1B-A	O13527	1196 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	IRS4	P36115	615 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	POA1	P38218	177 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	DYS1	P38791	387 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	PIC2	P40035	300 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	ALA1	P40825	983 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	YJR098C	P47139	656 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	SGM1	P47166	707 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	SKP1	P52286	194 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	YGL039W	P53183	348 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	VPS72	Q03388	795 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	TMA64	Q04600	565 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	DUS3	Q06053	668 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	ESF1	Q06344	628 aa	Known RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	NOC3	Q07896	663 aa	Predicted RBP	2.82	□□□□□ -1.96
VTC3	YPL019C	YOR296W	Q08748	1289 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	DAP1	Q12091	152 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	TAH18	Q12181	623 aa		2.82	□□□□□ -1.96
VTC3	YPL019C	ACE2	P21192	770 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	DBP7	P36120	742 aa	Known RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	ECM21	P38167	1117 aa	Known RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	REG2	P38232	338 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	VPS45	P38932	577 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	ALD5	P40047	520 aa	Known RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	VTC4	P47075	721 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	SCS3	P53012	380 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	FOL1	P53848	824 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.81	□□□□□ -1.96	not detected
VTC3	YPL019C	CUS1	Q02554	436 aa	Predicted RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	GUD1	Q07729	489 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	SSF2	Q12153	453 aa	Predicted RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	MOT1	P32333	1867 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	RPP2B	P02400	110 aa	Known RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.81	□□□□□ -1.96	not detected
VTC3	YPL019C	SWI6	P09959	803 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	HEM13	P11353	328 aa	Known RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	IDI1	P15496	288 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	COQ1	P18900	473 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	GCD6	P32501	712 aa	Known RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	GIP1	P38229	639 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	NMD2	P38798	1089 aa	Known RBP	2.81	□□□□□ -1.96
VTC3	YPL019C	AZR1	P50080	613 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	SAM37	P50110	327 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	LSB1	P53281	241 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	VPS30	Q02948	557 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	DAL4	Q04895	635 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	YMR321C	Q04898	105 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	YDR461C-A	Q2V2P7	80 aa		2.81	□□□□□ -1.96
VTC3	YPL019C	TOR1	P35169	2470 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	OPI1	P21957	404 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	MCM5	P29496	775 aa	Known RBP	2.8	□□□□□ -1.96
VTC3	YPL019C	OYE3	P41816	400 aa	Predicted RBP	2.8	□□□□□ -1.96
VTC3	YPL019C	SPO74	P45819	413 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	YPL109C	Q02981	657 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	MSC2	Q03455	724 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	CLF1	Q12309	687 aa	Predicted RBP	2.8	□□□□□ -1.96
VTC3	YPL019C	RKM4	Q12504	494 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	MAS2	P11914	482 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	POL3	P15436	1097 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	RPL8B	P29453	256 aa	Known RBP	2.8	□□□□□ -1.96
VTC3	YPL019C	PYC2	P32327	1180 aa	Known RBP	2.8	□□□□□ -1.96
VTC3	YPL019C	FLR1	P38124	548 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	ISW1	P38144	1129 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	YIL165C	P40446	119 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	LIF1	P53150	421 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	NAM8	Q00539	523 aa	Known RBP	2.8	□□□□□ -1.96
VTC3	YPL019C	RPS15	Q01855	142 aa	Known RBP	2.8	□□□□□ -1.96
VTC3	YPL019C	BRE1	Q07457	700 aa	Known RBP	2.8	□□□□□ -1.96
VTC3	YPL019C	ATG11	Q12527	1178 aa		2.8	□□□□□ -1.96
VTC3	YPL019C	NUC1	P08466	329 aa		2.79	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms