RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W VPS38Q05919 439 aa9.33□□□□□ -0.92
SFL1YOR140W CRD1Q07560 283 aa9.33□□□□□ -0.92
SFL1YOR140W PPR1P07272 904 aaPredicted RBP9.33□□□□□ -0.92
SFL1YOR140W SRD1P09007 221 aa9.33□□□□□ -0.92
SFL1YOR140W PDC6P26263 563 aaKnown RBP9.33□□□□□ -0.92
SFL1YOR140W SHQ1P40486 507 aaPredicted RBP9.33□□□□□ -0.92
SFL1YOR140W YFL034WP43564 1073 aa9.33□□□□□ -0.92
SFL1YOR140W ERG5P54781 538 aa9.33□□□□□ -0.92
SFL1YOR140W PER1P25625 357 aa9.32□□□□□ -0.92
SFL1YOR140W IES1P43579 692 aa9.32□□□□□ -0.92
SFL1YOR140W COG4Q06096 861 aa9.32□□□□□ -0.92
SFL1YOR140W GUD1Q07729 489 aa9.32□□□□□ -0.92
SFL1YOR140W RPC53P25441 422 aa9.32□□□□□ -0.92
SFL1YOR140W RPN3P40016 523 aaKnown RBP9.32□□□□□ -0.92
SFL1YOR140W AIM20P40451 204 aa9.32□□□□□ -0.92
SFL1YOR140W YLR001CQ07895 862 aa9.32□□□□□ -0.92
SFL1YOR140W PGK1P00560 416 aaKnown RBP9.31□□□□□ -0.92
SFL1YOR140W VMA2P16140 517 aaKnown RBP9.31□□□□□ -0.92
SFL1YOR140W XRS2P33301 854 aa9.31□□□□□ -0.92
SFL1YOR140W EFM2P38347 419 aa9.31□□□□□ -0.92
SFL1YOR140W FIS1P40515 155 aa9.31□□□□□ -0.92
SFL1YOR140W APT1P49435 187 aaKnown RBP9.31□□□□□ -0.92
SFL1YOR140W PHM6Q05637 104 aa9.31□□□□□ -0.92
SFL1YOR140W YPL277CQ08989 487 aa9.31□□□□□ -0.92
SFL1YOR140W CFT2Q12102 859 aaPredicted RBP9.31□□□□□ -0.92
SFL1YOR140W ERP3Q12403 225 aa9.31□□□□□ -0.92
SFL1YOR140W MCD4P36051 919 aa9.31□□□□□ -0.92
SFL1YOR140W REG2P38232 338 aa9.31□□□□□ -0.92
SFL1YOR140W VAB2P40003 282 aa9.31□□□□□ -0.92
SFL1YOR140W RCF1Q03713 159 aa9.31□□□□□ -0.92
SFL1YOR140W FAL1Q12099 399 aaKnown RBP9.31□□□□□ -0.92
SFL1YOR140W MCM16Q12262 181 aa9.31□□□□□ -0.92
SFL1YOR140W MTF2P10849 440 aa9.3□□□□□ -0.92
SFL1YOR140W SSA4P22202 642 aaKnown RBP9.3□□□□□ -0.92
SFL1YOR140W CDC48P25694 835 aaKnown RBP9.3□□□□□ -0.92
SFL1YOR140W CLB5P30283 435 aa9.3□□□□□ -0.92
SFL1YOR140W YKL023WP36103 277 aaKnown RBP9.3□□□□□ -0.92
SFL1YOR140W PCS60P38137 543 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92 RIP-Chip
SFL1YOR140W SSB1P11484 613 aaKnown RBP9.3□□□□□ -0.92
SFL1YOR140W UBC1P21734 215 aaKnown RBP9.3□□□□□ -0.92
SFL1YOR140W CDC60P26637 1090 aaKnown RBP9.3□□□□□ -0.92
SFL1YOR140W SSB2P40150 613 aaKnown RBP9.3□□□□□ -0.92
SFL1YOR140W AVT1P47082 602 aa9.3□□□□□ -0.92
SFL1YOR140W RRT6P53117 311 aaPredicted RBP9.3□□□□□ -0.92
SFL1YOR140W CNM67P53865 581 aaKnown RBP9.3□□□□□ -0.92
SFL1YOR140W ALF1P53904 254 aa9.3□□□□□ -0.92
SFL1YOR140W SLD5Q03406 294 aa9.3□□□□□ -0.92
SFL1YOR140W DUS4Q06063 367 aa9.3□□□□□ -0.92
SFL1YOR140W ISA1Q07821 250 aaPredicted RBP9.3□□□□□ -0.92
SFL1YOR140W TOM70P07213 617 aaKnown RBP9.29□□□□□ -0.92
SFL1YOR140W MAK16P10962 306 aaPredicted RBP9.29□□□□□ -0.92
SFL1YOR140W TKL1P23254 680 aaKnown RBP9.29□□□□□ -0.92
SFL1YOR140W LCB2P40970 561 aa9.29□□□□□ -0.92
SFL1YOR140W CCM1P48237 864 aaPredicted RBP9.29□□□□□ -0.92
SFL1YOR140W NOP56Q12460 504 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92 RIP-Chip
SFL1YOR140W RAD57P25301 460 aa9.28□□□□□ -0.92
SFL1YOR140W NAB3P38996 802 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
SFL1YOR140W YAP5P40574 245 aa9.28□□□□□ -0.92
SFL1YOR140W UBP15P50101 1230 aa9.28□□□□□ -0.92
SFL1YOR140W NCS2P53923 493 aaPredicted RBP9.28□□□□□ -0.92
SFL1YOR140W BOP3P53958 396 aa9.28□□□□□ -0.92
SFL1YOR140W SVF1Q05515 481 aa9.28□□□□□ -0.92
SFL1YOR140W MED1Q12321 566 aa9.28□□□□□ -0.92
SFL1YOR140W RPC82P32349 654 aa9.28□□□□□ -0.92
SFL1YOR140W EFM4P40516 257 aa9.28□□□□□ -0.92
SFL1YOR140W NET1P47035 1189 aa9.28□□□□□ -0.92
SFL1YOR140W SCS3P53012 380 aa9.28□□□□□ -0.92
SFL1YOR140W SEC5P89102 971 aa9.28□□□□□ -0.92
SFL1YOR140W SFI1Q12369 946 aa9.28□□□□□ -0.92
SFL1YOR140W RAD51P25454 400 aa9.27□□□□□ -0.92
SFL1YOR140W MRF1P30775 413 aaPredicted RBP9.27□□□□□ -0.92
SFL1YOR140W DBP7P36120 742 aaKnown RBP9.27□□□□□ -0.92
SFL1YOR140W PIM1P36775 1133 aa9.27□□□□□ -0.92
SFL1YOR140W VPS29P38759 282 aa9.27□□□□□ -0.92
SFL1YOR140W VID30P53076 958 aa9.27□□□□□ -0.92
SFL1YOR140W YMR321CQ04898 105 aa9.27□□□□□ -0.92
SFL1YOR140W APL1P27351 700 aa9.27□□□□□ -0.93
SFL1YOR140W CAJ1P39101 391 aa9.27□□□□□ -0.93
SFL1YOR140W MMM1P41800 426 aa9.27□□□□□ -0.93
SFL1YOR140W CEF1Q03654 590 aaPredicted RBP9.27□□□□□ -0.93
SFL1YOR140W SOV1Q04748 898 aa9.27□□□□□ -0.93
SFL1YOR140W RRP15Q06511 250 aaPredicted RBP9.27□□□□□ -0.93
SFL1YOR140W NEW1Q08972 1196 aaKnown RBP9.27□□□□□ -0.93
SFL1YOR140W SEC23P15303 768 aaKnown RBP9.26□□□□□ -0.93
SFL1YOR140W EUG1P32474 517 aa9.26□□□□□ -0.93
SFL1YOR140W SMC1P32908 1225 aa9.26□□□□□ -0.93
SFL1YOR140W GPB2P39717 880 aa9.26□□□□□ -0.93
SFL1YOR140W CEP3P40969 608 aa9.26□□□□□ -0.93
SFL1YOR140W ZPR1P53303 486 aaKnown RBP9.26□□□□□ -0.93
SFL1YOR140W PCK1P10963 549 aa9.26□□□□□ -0.93
SFL1YOR140W DBP5P20449 482 aaKnown RBP9.26□□□□□ -0.93
SFL1YOR140W PRP31P49704 494 aaPredicted RBP9.26□□□□□ -0.93
SFL1YOR140W TAM41P53230 385 aa9.26□□□□□ -0.93
SFL1YOR140W UBP3Q01477 912 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
SFL1YOR140W NOC3Q07896 663 aaPredicted RBP9.26□□□□□ -0.93
SFL1YOR140W VPS5Q92331 675 aa9.26□□□□□ -0.93
SFL1YOR140W ECM29P38737 1868 aa9.25□□□□□ -0.93
SFL1YOR140W DED1P06634 604 aaKnown RBP9.25□□□□□ -0.93
SFL1YOR140W SET5P38890 526 aaKnown RBP9.25□□□□□ -0.93
SFL1YOR140W RPS7BP48164 190 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms