RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C TY1A-LR3P0CX75 440 aa7.54□□□□□ -1.2
TSR3YOR006C TY1A-ML2P0CX76 440 aa7.54□□□□□ -1.2
TSR3YOR006C HPR1P17629 752 aaKnown RBP7.54□□□□□ -1.2
TSR3YOR006C VMA4P22203 233 aaKnown RBP7.54□□□□□ -1.2
TSR3YOR006C PRE9P23638 258 aaKnown RBP7.54□□□□□ -1.2
TSR3YOR006C PEX28P38848 579 aa7.54□□□□□ -1.2
TSR3YOR006C VPS4P52917 437 aa7.54□□□□□ -1.2
TSR3YOR006C SPO1P53541 631 aa7.54□□□□□ -1.2
TSR3YOR006C TY1A-GR1Q12085 440 aa7.54□□□□□ -1.2
TSR3YOR006C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.54□□□□□ -1.2
TSR3YOR006C TY1A-OLQ92392 440 aaKnown RBP7.54□□□□□ -1.2
TSR3YOR006C ADR1P07248 1323 aa7.53□□□□□ -1.2
TSR3YOR006C MCM2P29469 868 aa7.53□□□□□ -1.2
TSR3YOR006C FYV10P40492 516 aa7.53□□□□□ -1.2
TSR3YOR006C ESF1Q06344 628 aaKnown RBP7.53□□□□□ -1.2
TSR3YOR006C NCB2Q92317 146 aa7.53□□□□□ -1.2
TSR3YOR006C POM152P39685 1337 aa7.52□□□□□ -1.2
TSR3YOR006C FAS2P19097 1887 aaKnown RBP7.52□□□□□ -1.21
TSR3YOR006C TAF13P11747 167 aa7.52□□□□□ -1.21
TSR3YOR006C LCB1P25045 558 aaKnown RBP7.52□□□□□ -1.21
TSR3YOR006C COQ2P32378 372 aa7.52□□□□□ -1.21
TSR3YOR006C PEA2P40091 420 aa7.52□□□□□ -1.21
TSR3YOR006C DOT1Q04089 582 aaKnown RBP7.52□□□□□ -1.21
TSR3YOR006C SPR28Q04921 423 aa7.52□□□□□ -1.21
TSR3YOR006C ACK1Q07622 623 aaPredicted RBP7.52□□□□□ -1.21
TSR3YOR006C RRI2Q12348 645 aa7.52□□□□□ -1.21
TSR3YOR006C SEC18P18759 758 aaKnown RBP7.51□□□□□ -1.21
TSR3YOR006C GCD7P32502 381 aaPredicted RBP7.51□□□□□ -1.21
TSR3YOR006C PGM1P33401 570 aaKnown RBP7.51□□□□□ -1.21
TSR3YOR006C STV1P37296 890 aa7.51□□□□□ -1.21
TSR3YOR006C ATG14P38270 344 aa7.51□□□□□ -1.21
TSR3YOR006C FUN12P39730 1002 aaKnown RBP7.51□□□□□ -1.21
TSR3YOR006C YGL140CP53120 1219 aa7.51□□□□□ -1.21
TSR3YOR006C SNU71P53207 620 aaKnown RBP7.51□□□□□ -1.21
TSR3YOR006C WRS1Q12109 432 aaKnown RBP7.51□□□□□ -1.21
TSR3YOR006C RPS7AP26786 190 aaKnown RBP7.5□□□□□ -1.21
TSR3YOR006C PEP7P32609 515 aa7.5□□□□□ -1.21
TSR3YOR006C AVO1Q08236 1176 aa7.5□□□□□ -1.21
TSR3YOR006C FIG2P25653 1609 aa7.49□□□□□ -1.21
TSR3YOR006C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21 RIP-Chip
TSR3YOR006C PIF1P07271 859 aa7.49□□□□□ -1.21
TSR3YOR006C SEC23P15303 768 aaKnown RBP7.49□□□□□ -1.21
TSR3YOR006C NEM1P38757 446 aa7.49□□□□□ -1.21
TSR3YOR006C PIC2P40035 300 aa7.49□□□□□ -1.21
TSR3YOR006C YIL089WP40500 205 aa7.49□□□□□ -1.21
TSR3YOR006C SLS1P42900 643 aa7.49□□□□□ -1.21
TSR3YOR006C GIC2Q06648 383 aa7.49□□□□□ -1.21
TSR3YOR006C FLO11P08640 1367 aa7.48□□□□□ -1.21
TSR3YOR006C RPT3P33298 428 aaKnown RBP7.48□□□□□ -1.21
TSR3YOR006C SAF1P38352 637 aa7.48□□□□□ -1.21
TSR3YOR006C AKR1P39010 764 aa7.48□□□□□ -1.21
TSR3YOR006C YFH7P43591 353 aa7.48□□□□□ -1.21
TSR3YOR006C UTP5Q04177 643 aaKnown RBP7.48□□□□□ -1.21
TSR3YOR006C ALG6Q12001 544 aaKnown RBP7.48□□□□□ -1.21
TSR3YOR006C CBP1P07252 654 aa7.47□□□□□ -1.21
TSR3YOR006C GPT2P36148 743 aa7.47□□□□□ -1.21
TSR3YOR006C RDH54P38086 958 aa7.47□□□□□ -1.21
TSR3YOR006C NMD2P38798 1089 aaKnown RBP7.47□□□□□ -1.21
TSR3YOR006C YNL193WP53870 558 aa7.47□□□□□ -1.21
TSR3YOR006C INM2Q05533 292 aa7.47□□□□□ -1.21
TSR3YOR006C LAP2Q10740 671 aa7.47□□□□□ -1.21
TSR3YOR006C HSE1P38753 452 aa7.46□□□□□ -1.22
TSR3YOR006C YIR042CP40586 236 aa7.46□□□□□ -1.22
TSR3YOR006C YGR045CP53229 120 aa7.46□□□□□ -1.22
TSR3YOR006C SVF1Q05515 481 aa7.46□□□□□ -1.22
TSR3YOR006C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
TSR3YOR006C CHS2P14180 963 aa7.45□□□□□ -1.22
TSR3YOR006C MDL2P33311 773 aa7.45□□□□□ -1.22
TSR3YOR006C PTK1P36002 662 aaPredicted RBP7.45□□□□□ -1.22
TSR3YOR006C NNK1P36003 928 aa7.45□□□□□ -1.22
TSR3YOR006C ADD66P36040 267 aa7.45□□□□□ -1.22
TSR3YOR006C KAE1P36132 386 aa7.45□□□□□ -1.22
TSR3YOR006C YAR028WP39548 234 aa7.45□□□□□ -1.22
TSR3YOR006C RRT6P53117 311 aaPredicted RBP7.45□□□□□ -1.22
TSR3YOR006C RKM2Q03942 479 aa7.45□□□□□ -1.22
TSR3YOR006C RPN7Q06103 429 aaKnown RBP7.45□□□□□ -1.22
TSR3YOR006C NAM7P30771 971 aaKnown RBP7.44□□□□□ -1.22
TSR3YOR006C ETP1P38748 585 aaKnown RBP7.44□□□□□ -1.22
TSR3YOR006C FPR3P38911 411 aaKnown RBP7.44□□□□□ -1.22
TSR3YOR006C NIT1P40447 199 aa7.44□□□□□ -1.22
TSR3YOR006C ENT3P47160 408 aa7.44□□□□□ -1.22
TSR3YOR006C YGL242CP53066 181 aa7.44□□□□□ -1.22
TSR3YOR006C MTC3P53077 123 aa7.44□□□□□ -1.22
TSR3YOR006C ELA1P53861 379 aaPredicted RBP7.44□□□□□ -1.22
TSR3YOR006C CYB2P00175 591 aa7.43□□□□□ -1.22
TSR3YOR006C SMY2P32909 740 aaKnown RBP7.43□□□□□ -1.22
TSR3YOR006C MSH4P40965 878 aaPredicted RBP7.43□□□□□ -1.22
TSR3YOR006C SPO74P45819 413 aa7.43□□□□□ -1.22
TSR3YOR006C MLC1P53141 149 aa7.43□□□□□ -1.22
TSR3YOR006C EST2Q06163 884 aa7.43□□□□□ -1.22
TSR3YOR006C YLR122CQ12312 125 aa7.43□□□□□ -1.22
TSR3YOR006C PDR18P53756 1333 aa7.43□□□□□ -1.22
TSR3YOR006C DUR1,2P32528 1835 aaKnown RBP7.43□□□□□ -1.22
TSR3YOR006C SBP1P10080 294 aaKnown RBP7.42□□□□□ -1.22
TSR3YOR006C MSB1P21339 1137 aaKnown RBP7.42□□□□□ -1.22
TSR3YOR006C MMM1P41800 426 aa7.42□□□□□ -1.22
TSR3YOR006C DUS1P53759 423 aaKnown RBP7.42□□□□□ -1.22
TSR3YOR006C NOT3P06102 836 aaKnown RBP7.41□□□□□ -1.22
TSR3YOR006C SNF3P10870 884 aa7.41□□□□□ -1.22
TSR3YOR006C HEM13P11353 328 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms