RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	TY1A-ML1	Q04706	440 aa	Known RBP	3.77	□□□□□ -1.81
TOP1	YOL006C	YPQ2	Q06328	317 aa		3.77	□□□□□ -1.81
TOP1	YOL006C	MDM38	Q08179	573 aa		3.77	□□□□□ -1.81
TOP1	YOL006C	TY1A-BR	Q12217	440 aa		3.77	□□□□□ -1.81
TOP1	YOL006C	YOL114C	Q12322	202 aa		3.77	□□□□□ -1.81
TOP1	YOL006C	TY1A-NL2	Q12470	440 aa		3.77	□□□□□ -1.81
TOP1	YOL006C	TY1A-GR2	Q12485	440 aa		3.77	□□□□□ -1.81
TOP1	YOL006C	MSD1	P15179	658 aa	Known RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	MET8	P15807	274 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	SEC2	P17065	759 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	COX11	P19516	300 aa	Known RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	CMK1	P27466	446 aa	Known RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	GCD11	P32481	527 aa	Known RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	MDJ1	P35191	511 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	GTT3	P39996	337 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	ALG2	P43636	503 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	VPS53	P47061	822 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	PCL10	P53124	433 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	YAP1802	P53309	568 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	APP1	P53933	587 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	TIM50	Q02776	476 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	SYF1	Q04048	859 aa	Predicted RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	ADY3	Q07732	790 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	ESC8	Q08119	714 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	PEX15	Q08215	383 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	CFT2	Q12102	859 aa	Predicted RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	RKM4	Q12504	494 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	CHD1	P32657	1468 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
TOP1	YOL006C	DAT1	P13483	248 aa	Known RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	GFA1	P14742	717 aa	Known RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	GLK1	P17709	500 aa	Known RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	RPC53	P25441	422 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	ORC2	P32833	620 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	NPR3	P38742	1146 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	AXL1	P40851	1208 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	YGL176C	P46945	554 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	SET2	P46995	733 aa	Known RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	ENT3	P47160	408 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	SLD3	P53135	668 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	TIM10	P87108	93 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	ISU1	Q03020	165 aa		3.76	□□□□□ -1.81
TOP1	YOL006C	MON2	P48563	1636 aa	Predicted RBP	3.76	□□□□□ -1.81
TOP1	YOL006C	STF1	P01098	86 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	SUI2	P20459	304 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	PTC4	P38089	393 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	MCM7	P38132	845 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	TPA1	P40032	644 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	RRD1	P40454	393 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	VHR1	P40522	640 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	ROG3	P43602	733 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	CNM67	P53865	581 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	TIF35	Q04067	274 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	HIM1	Q06674	414 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	UTP4	Q06679	776 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	YPL066W	Q12194	479 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
TOP1	YOL006C	HEM13	P11353	328 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	DAL7	P21826	554 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	CDC48	P25694	835 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	IRE1	P32361	1115 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	DUR3	P33413	735 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	PET10	P36139	283 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	PCM1	P38628	557 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	QDR2	P40474	542 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	SBE2	P42223	864 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	YGR153W	P48238	217 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	RNR4	P49723	345 aa	Known RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	OCA1	P50946	238 aa	Predicted RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	ELA1	P53861	379 aa	Predicted RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	PEX13	P80667	386 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	ROD1	Q02805	837 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	SPO71	Q03868	1245 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	ECM38	Q05902	660 aa	Predicted RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	PMT7	Q06644	662 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	PLP2	Q12017	286 aa		3.75	□□□□□ -1.81
TOP1	YOL006C	SMF3	Q12078	473 aa	Predicted RBP	3.75	□□□□□ -1.81
TOP1	YOL006C	SAC3	P46674	1301 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	BI4	P03879	638 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	VMA2	P16140	517 aa	Known RBP	3.74	□□□□□ -1.81
TOP1	YOL006C	DBF4	P32325	704 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	YKU70	P32807	602 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	NPL6	P32832	435 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	BYE1	P36106	594 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	DID4	P36108	232 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	YEL068C	P39977	110 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	KAP123	P40069	1113 aa	Known RBP	3.74	□□□□□ -1.81
TOP1	YOL006C	MID1	P41821	548 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	SAP155	P43612	1002 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	ZIP2	P53061	704 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	NCS2	P53923	493 aa	Predicted RBP	3.74	□□□□□ -1.81
TOP1	YOL006C	RSC2	Q06488	889 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	GYP1	Q08484	637 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	APC5	Q08683	685 aa		3.74	□□□□□ -1.81
TOP1	YOL006C	TRX1	P22217	103 aa	Known RBP	3.73	□□□□□ -1.81
TOP1	YOL006C	MSH1	P25846	959 aa		3.73	□□□□□ -1.81
TOP1	YOL006C	YBR287W	P38355	427 aa		3.73	□□□□□ -1.81
TOP1	YOL006C	RGA1	P39083	1007 aa		3.73	□□□□□ -1.81
TOP1	YOL006C	RIC1	P40395	1056 aa		3.73	□□□□□ -1.81
TOP1	YOL006C	NMA111	P53920	997 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms