RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C SAM2P19358 384 aaKnown RBP9.31□□□□□ -0.92
RPD3YNL330C SUL1P38359 859 aa9.31□□□□□ -0.92
RPD3YNL330C PIH1P38768 344 aa9.31□□□□□ -0.92
RPD3YNL330C DSN1P40568 576 aa9.31□□□□□ -0.92
RPD3YNL330C TRS85P46944 698 aa9.31□□□□□ -0.92
RPD3YNL330C RPC17P47076 161 aa9.31□□□□□ -0.92
RPD3YNL330C COS5P47187 383 aa9.31□□□□□ -0.92
RPD3YNL330C NBP1P52919 319 aaPredicted RBP9.31□□□□□ -0.92
RPD3YNL330C SNU71P53207 620 aaKnown RBP9.31□□□□□ -0.92
RPD3YNL330C PGA2P53903 129 aa9.31□□□□□ -0.92
RPD3YNL330C OYE2Q03558 400 aaKnown RBP9.31□□□□□ -0.92
RPD3YNL330C ECI1Q05871 280 aa9.31□□□□□ -0.92
RPD3YNL330C SEC8P32855 1065 aa9.31□□□□□ -0.92
RPD3YNL330C YBL086CP38177 466 aa9.31□□□□□ -0.92
RPD3YNL330C TPS3P38426 1054 aaKnown RBP9.31□□□□□ -0.92
RPD3YNL330C YJL171CP46992 396 aa9.31□□□□□ -0.92
RPD3YNL330C DPL1Q05567 589 aa9.31□□□□□ -0.92
RPD3YNL330C UTP4Q06679 776 aaKnown RBP9.31□□□□□ -0.92
RPD3YNL330C OXR1Q08952 273 aa9.31□□□□□ -0.92
RPD3YNL330C YPL277CQ08989 487 aa9.31□□□□□ -0.92
RPD3YNL330C SWI6P09959 803 aa9.3□□□□□ -0.92
RPD3YNL330C ERG11P10614 530 aa9.3□□□□□ -0.92
RPD3YNL330C TRK2P28584 889 aa9.3□□□□□ -0.92
RPD3YNL330C YBL028CP38202 106 aa9.3□□□□□ -0.92
RPD3YNL330C YJR039WP47107 1121 aa9.3□□□□□ -0.92
RPD3YNL330C SYH1Q02875 849 aaKnown RBP9.3□□□□□ -0.92
RPD3YNL330C EEB1Q02891 456 aa9.3□□□□□ -0.92
RPD3YNL330C SUE1Q06524 206 aa9.3□□□□□ -0.92
RPD3YNL330C FLO11P08640 1367 aa9.29□□□□□ -0.92
RPD3YNL330C PCK1P10963 549 aa9.29□□□□□ -0.92
RPD3YNL330C DAL7P21826 554 aa9.29□□□□□ -0.92
RPD3YNL330C ADP1P25371 1049 aa9.29□□□□□ -0.92
RPD3YNL330C AFG2P32794 780 aa9.29□□□□□ -0.92
RPD3YNL330C RCK2P38623 610 aa9.29□□□□□ -0.92
RPD3YNL330C YMR018WQ04364 514 aa9.29□□□□□ -0.92
RPD3YNL330C UTP14Q04500 899 aaKnown RBP9.29□□□□□ -0.92
RPD3YNL330C YLR297WQ05899 129 aa9.29□□□□□ -0.92
RPD3YNL330C YDL057WQ07379 328 aa9.29□□□□□ -0.92
RPD3YNL330C YPL225WQ08971 146 aaKnown RBP9.29□□□□□ -0.92
RPD3YNL330C FAL1Q12099 399 aaKnown RBP9.29□□□□□ -0.92
RPD3YNL330C BLI1P35727 113 aa9.28□□□□□ -0.92
RPD3YNL330C MCD4P36051 919 aa9.28□□□□□ -0.92
RPD3YNL330C YSW1P38280 609 aa9.28□□□□□ -0.92
RPD3YNL330C FIG4P42837 879 aa9.28□□□□□ -0.92
RPD3YNL330C FMS1P50264 508 aa9.28□□□□□ -0.92
RPD3YNL330C JJJ1P53863 590 aa9.28□□□□□ -0.92
RPD3YNL330C CRF1Q04930 467 aa9.28□□□□□ -0.92
RPD3YNL330C TRP2P00899 507 aaKnown RBP9.27□□□□□ -0.93
RPD3YNL330C CDC10P25342 322 aaKnown RBP9.27□□□□□ -0.93
RPD3YNL330C ICL1P28240 557 aaPredicted RBP9.27□□□□□ -0.93
RPD3YNL330C PGM1P33401 570 aaKnown RBP9.27□□□□□ -0.93
RPD3YNL330C SQT1P35184 431 aa9.27□□□□□ -0.93
RPD3YNL330C RIX1P38883 763 aaPredicted RBP9.27□□□□□ -0.93
RPD3YNL330C ESBP6P53918 673 aa9.27□□□□□ -0.93
RPD3YNL330C ORC4P54791 529 aa9.27□□□□□ -0.93
RPD3YNL330C SEN54Q02825 467 aaPredicted RBP9.27□□□□□ -0.93
RPD3YNL330C DIG1Q03063 452 aaKnown RBP9.27□□□□□ -0.93
RPD3YNL330C LAP2Q10740 671 aa9.27□□□□□ -0.93
RPD3YNL330C PMA1P05030 918 aaKnown RBP9.26□□□□□ -0.93
RPD3YNL330C SCP160P06105 1222 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93 RIP-Chip
RPD3YNL330C RPB2P08518 1224 aaKnown RBP9.26□□□□□ -0.93
RPD3YNL330C SAK1P38990 1142 aa9.26□□□□□ -0.93
RPD3YNL330C PSY2P40164 858 aa9.26□□□□□ -0.93
RPD3YNL330C TGL3P40308 642 aa9.26□□□□□ -0.93
RPD3YNL330C SOL4P53315 255 aa9.26□□□□□ -0.93
RPD3YNL330C CNM67P53865 581 aaKnown RBP9.26□□□□□ -0.93
RPD3YNL330C CSR1Q06705 408 aaKnown RBP9.26□□□□□ -0.93
RPD3YNL330C ARP6Q12509 438 aa9.26□□□□□ -0.93
RPD3YNL330C CTT1P06115 562 aa9.25□□□□□ -0.93
RPD3YNL330C SRD1P09007 221 aa9.25□□□□□ -0.93
RPD3YNL330C PRE10P21242 288 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
RPD3YNL330C YKL023WP36103 277 aaKnown RBP9.25□□□□□ -0.93
RPD3YNL330C UBP13P38187 747 aa9.25□□□□□ -0.93
RPD3YNL330C CCT2P39076 527 aaKnown RBP9.25□□□□□ -0.93
RPD3YNL330C SPC72P39723 622 aa9.25□□□□□ -0.93
RPD3YNL330C YNL320WP42840 284 aa9.25□□□□□ -0.93
RPD3YNL330C VPS4P52917 437 aa9.25□□□□□ -0.93
RPD3YNL330C CUR1Q06469 252 aa9.25□□□□□ -0.93
RPD3YNL330C RLP24Q07915 199 aaKnown RBP9.25□□□□□ -0.93
RPD3YNL330C SDH5Q08230 162 aa9.25□□□□□ -0.93
RPD3YNL330C AIM41Q12032 185 aa9.25□□□□□ -0.93
RPD3YNL330C SPO21Q12411 609 aa9.25□□□□□ -0.93
RPD3YNL330C GSC2P40989 1895 aa9.25□□□□□ -0.93
RPD3YNL330C ARG4P04076 463 aaPredicted RBP9.24□□□□□ -0.93
RPD3YNL330C SNF1P06782 633 aaKnown RBP9.24□□□□□ -0.93
RPD3YNL330C PHO8P11491 566 aa9.24□□□□□ -0.93
RPD3YNL330C CLN3P13365 580 aa9.24□□□□□ -0.93
RPD3YNL330C PRP16P15938 1071 aaPredicted RBP9.24□□□□□ -0.93
RPD3YNL330C YKL050CP35736 922 aa9.24□□□□□ -0.93
RPD3YNL330C OAF3P36023 863 aa9.24□□□□□ -0.93
RPD3YNL330C BRE2P43132 505 aa9.24□□□□□ -0.93
RPD3YNL330C MTC3P53077 123 aa9.24□□□□□ -0.93
RPD3YNL330C YLR462WO13556 202 aa9.23□□□□□ -0.93
RPD3YNL330C ARD1P07347 238 aaPredicted RBP9.23□□□□□ -0.93
RPD3YNL330C RNA1P11745 407 aaKnown RBP9.23□□□□□ -0.93
RPD3YNL330C CHS2P14180 963 aa9.23□□□□□ -0.93
RPD3YNL330C SEC21P32074 935 aaKnown RBP9.23□□□□□ -0.93
RPD3YNL330C UGA4P32837 571 aa9.23□□□□□ -0.93
RPD3YNL330C LOS1P33418 1100 aaPredicted RBP9.23□□□□□ -0.93
RPD3YNL330C YHL049CP38722 271 aa9.23□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms