RNA–Protein interactions for RNA: YNL212W

VID27, Transcript of Cytoplasmic protein of unknown function, yeast

Gene VID27, Length 2,349 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID27	YNL212W	SSL1	Q04673	461 aa	Predicted RBP	4.24	□□□□□ -1.73
VID27	YNL212W	NOC3	Q07896	663 aa	Predicted RBP	4.24	□□□□□ -1.73
VID27	YNL212W	RRP6	Q12149	733 aa	Known RBP	4.24	□□□□□ -1.73
VID27	YNL212W	APC11	Q12157	165 aa		4.24	□□□□□ -1.73
VID27	YNL212W	MED1	Q12321	566 aa		4.24	□□□□□ -1.73
VID27	YNL212W	APA1	P16550	321 aa	Known RBP	4.24	□□□□□ -1.73
VID27	YNL212W	MCM10	P32354	571 aa		4.24	□□□□□ -1.73
VID27	YNL212W	YBR197C	P38306	217 aa		4.24	□□□□□ -1.73
VID27	YNL212W	RIM4	P38741	713 aa		4.24	□□□□□ -1.73
VID27	YNL212W	CAJ1	P39101	391 aa		4.24	□□□□□ -1.73
VID27	YNL212W	GEM1	P39722	662 aa		4.24	□□□□□ -1.73
VID27	YNL212W	VAB2	P40003	282 aa		4.24	□□□□□ -1.73
VID27	YNL212W	BFA1	P47113	574 aa		4.24	□□□□□ -1.73
VID27	YNL212W	TBF1	Q02457	562 aa		4.24	□□□□□ -1.73
VID27	YNL212W	VTI1	Q04338	217 aa		4.24	□□□□□ -1.73
VID27	YNL212W	FMP25	Q08023	583 aa		4.24	□□□□□ -1.73
VID27	YNL212W	TRE2	Q08693	809 aa		4.24	□□□□□ -1.73
VID27	YNL212W	MCD1	Q12158	566 aa		4.24	□□□□□ -1.73
VID27	YNL212W	TRP2	P00899	507 aa	Known RBP	4.23	□□□□□ -1.73
VID27	YNL212W	ARE1	P25628	610 aa		4.23	□□□□□ -1.73
VID27	YNL212W	ILV3	P39522	585 aa	Known RBP	4.23	□□□□□ -1.73
VID27	YNL212W	DAL4	Q04895	635 aa		4.23	□□□□□ -1.73
VID27	YNL212W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
VID27	YNL212W	YDR056C	Q12025	205 aa		4.23	□□□□□ -1.73
VID27	YNL212W	HSP82	P02829	709 aa	Known RBP	4.23	□□□□□ -1.73
VID27	YNL212W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
VID27	YNL212W	KRR1	P25586	316 aa	Predicted RBP	4.23	□□□□□ -1.73
VID27	YNL212W	CHS3	P29465	1165 aa		4.23	□□□□□ -1.73
VID27	YNL212W	HSP78	P33416	811 aa		4.23	□□□□□ -1.73
VID27	YNL212W	NUP120	P35729	1037 aa		4.23	□□□□□ -1.73
VID27	YNL212W	RKM3	P38222	552 aa		4.23	□□□□□ -1.73
VID27	YNL212W	AFG3	P39925	761 aa		4.23	□□□□□ -1.73
VID27	YNL212W	UTP7	P40055	554 aa	Known RBP	4.23	□□□□□ -1.73
VID27	YNL212W	HSV2	P50079	448 aa	Predicted RBP	4.23	□□□□□ -1.73
VID27	YNL212W	SSP2	Q08646	371 aa		4.23	□□□□□ -1.73
VID27	YNL212W	DBF20	P32328	564 aa		4.22	□□□□□ -1.73
VID27	YNL212W	STO1	P34160	861 aa	Known RBP	4.22	□□□□□ -1.73
VID27	YNL212W	YKL050C	P35736	922 aa		4.22	□□□□□ -1.73
VID27	YNL212W	OCT1	P35999	772 aa		4.22	□□□□□ -1.73
VID27	YNL212W	EAP1	P36041	632 aa	Known RBP	4.22	□□□□□ -1.73
VID27	YNL212W	FIG4	P42837	879 aa		4.22	□□□□□ -1.73
VID27	YNL212W	YFL034W	P43564	1073 aa		4.22	□□□□□ -1.73
VID27	YNL212W	ENV11	P53246	860 aa		4.22	□□□□□ -1.73
VID27	YNL212W	BTN2	P53286	410 aa		4.22	□□□□□ -1.73
VID27	YNL212W	YNL058C	P53947	316 aa		4.22	□□□□□ -1.73
VID27	YNL212W	ALR1	Q08269	859 aa		4.22	□□□□□ -1.73
VID27	YNL212W	NEW1	Q08972	1196 aa	Known RBP	4.22	□□□□□ -1.73
VID27	YNL212W	IMG2	P25642	146 aa	Predicted RBP	4.22	□□□□□ -1.73
VID27	YNL212W	MRF1	P30775	413 aa	Predicted RBP	4.22	□□□□□ -1.73
VID27	YNL212W	VMA8	P32610	256 aa	Known RBP	4.22	□□□□□ -1.73
VID27	YNL212W	ESL2	P36168	1195 aa		4.22	□□□□□ -1.73
VID27	YNL212W	AIM9	P40053	627 aa	Known RBP	4.22	□□□□□ -1.73
VID27	YNL212W	TMA108	P40462	946 aa		4.22	□□□□□ -1.73
VID27	YNL212W	SUT1	P53032	299 aa	Known RBP	4.22	□□□□□ -1.73
VID27	YNL212W	ERP6	P53198	216 aa		4.22	□□□□□ -1.73
VID27	YNL212W	SDA1	P53313	767 aa	Known RBP	4.22	□□□□□ -1.73
VID27	YNL212W	HEL2	Q05580	639 aa	Known RBP	4.22	□□□□□ -1.73
VID27	YNL212W	TOM70	P07213	617 aa	Known RBP	4.21	□□□□□ -1.74
VID27	YNL212W	AAD3	P25612	363 aa		4.21	□□□□□ -1.74
VID27	YNL212W	NIC96	P34077	839 aa		4.21	□□□□□ -1.74
VID27	YNL212W	NTH2	P35172	780 aa		4.21	□□□□□ -1.74
VID27	YNL212W	ARP1	P38696	384 aa		4.21	□□□□□ -1.74
VID27	YNL212W	SUM1	P46676	1062 aa		4.21	□□□□□ -1.74
VID27	YNL212W	ATP22	P50273	684 aa	Predicted RBP	4.21	□□□□□ -1.74
VID27	YNL212W	RSC4	Q02206	625 aa		4.21	□□□□□ -1.74
VID27	YNL212W	HEH2	Q03281	663 aa		4.21	□□□□□ -1.74
VID27	YNL212W	YLR257W	Q06146	321 aa	Known RBP	4.21	□□□□□ -1.74
VID27	YNL212W	SPN1	Q06505	410 aa	Predicted RBP	4.21	□□□□□ -1.74
VID27	YNL212W	CDC73	Q06697	393 aa		4.21	□□□□□ -1.74
VID27	YNL212W	ACK1	Q07622	623 aa	Predicted RBP	4.21	□□□□□ -1.74
VID27	YNL212W	QCR6	P00127	147 aa		4.21	□□□□□ -1.74
VID27	YNL212W	TPM1	P17536	199 aa	Known RBP	4.21	□□□□□ -1.74
VID27	YNL212W	IMP2'	P32351	346 aa		4.21	□□□□□ -1.74
VID27	YNL212W	BET3	P36149	193 aa		4.21	□□□□□ -1.74
VID27	YNL212W	BAP2	P38084	609 aa		4.21	□□□□□ -1.74
VID27	YNL212W	TGL3	P40308	642 aa		4.21	□□□□□ -1.74
VID27	YNL212W	SEC27	P41811	889 aa	Known RBP	4.21	□□□□□ -1.74
VID27	YNL212W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
VID27	YNL212W	RRP9	Q06506	573 aa	Known RBP	4.21	□□□□□ -1.74
VID27	YNL212W	RTT10	Q08924	1013 aa		4.21	□□□□□ -1.74
VID27	YNL212W	GYP5	Q12344	894 aa		4.21	□□□□□ -1.74
VID27	YNL212W	FRD1	P32614	470 aa	Known RBP	4.2	□□□□□ -1.74
VID27	YNL212W	NGR1	P32831	672 aa	Known RBP	4.2	□□□□□ -1.74
VID27	YNL212W	KTR2	P33550	425 aa		4.2	□□□□□ -1.74
VID27	YNL212W	PXA2	P34230	853 aa		4.2	□□□□□ -1.74
VID27	YNL212W	MCD4	P36051	919 aa		4.2	□□□□□ -1.74
VID27	YNL212W	CCT3	P39077	534 aa	Known RBP	4.2	□□□□□ -1.74
VID27	YNL212W	GDH3	P39708	457 aa		4.2	□□□□□ -1.74
VID27	YNL212W	MAL11	P53048	616 aa		4.2	□□□□□ -1.74
VID27	YNL212W	EEB1	Q02891	456 aa		4.2	□□□□□ -1.74
VID27	YNL212W	HFD1	Q04458	532 aa		4.2	□□□□□ -1.74
VID27	YNL212W	MLC2	Q06580	163 aa		4.2	□□□□□ -1.74
VID27	YNL212W	YDL206W	Q12424	762 aa		4.2	□□□□□ -1.74
VID27	YNL212W	CEX1	Q12453	761 aa		4.2	□□□□□ -1.74
VID27	YNL212W	GCR1	P07261	785 aa		4.2	□□□□□ -1.74
VID27	YNL212W	NAT1	P12945	854 aa	Known RBP	4.2	□□□□□ -1.74
VID27	YNL212W	MEF1	P25039	761 aa		4.2	□□□□□ -1.74
VID27	YNL212W	RGT1	P32862	1170 aa		4.2	□□□□□ -1.74
VID27	YNL212W	SMY2	P32909	740 aa	Known RBP	4.2	□□□□□ -1.74
VID27	YNL212W	MRP8	P35719	219 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms