RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C UME1Q03010 460 aa4.43□□□□□ -1.7
WHI3YNL197C RSC3Q06639 885 aa4.43□□□□□ -1.7
WHI3YNL197C THI72Q08579 599 aa4.43□□□□□ -1.7
WHI3YNL197C GSY1P23337 708 aa4.42□□□□□ -1.7
WHI3YNL197C MCD4P36051 919 aa4.42□□□□□ -1.7
WHI3YNL197C CAF16P43569 289 aa4.42□□□□□ -1.7
WHI3YNL197C PRY1P47032 299 aa4.42□□□□□ -1.7
WHI3YNL197C SFB2P53953 876 aa4.42□□□□□ -1.7
WHI3YNL197C YOL057WQ08225 711 aa4.42□□□□□ -1.7
WHI3YNL197C TMA17Q12513 150 aa4.42□□□□□ -1.7
WHI3YNL197C RSC6P25632 483 aa4.42□□□□□ -1.7
WHI3YNL197C NAM7P30771 971 aaKnown RBP4.42□□□□□ -1.7
WHI3YNL197C YHL012WP38709 493 aa4.42□□□□□ -1.7
WHI3YNL197C YER158CP40095 573 aa4.42□□□□□ -1.7
WHI3YNL197C RRT14P40470 206 aa4.42□□□□□ -1.7
WHI3YNL197C MET13P53128 600 aa4.42□□□□□ -1.7
WHI3YNL197C RTS3P53289 263 aa4.42□□□□□ -1.7
WHI3YNL197C NRD1P53617 575 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
WHI3YNL197C XYL2Q07993 356 aa4.42□□□□□ -1.7
WHI3YNL197C YDR215CQ12240 137 aa4.42□□□□□ -1.7
WHI3YNL197C NUP145P49687 1317 aa4.41□□□□□ -1.7
WHI3YNL197C COQ4O13525 335 aa4.41□□□□□ -1.7
WHI3YNL197C THS1P04801 734 aaKnown RBP4.41□□□□□ -1.7
WHI3YNL197C YCK2P23292 546 aaKnown RBP4.41□□□□□ -1.7
WHI3YNL197C SRO9P25567 434 aaKnown RBP4.41□□□□□ -1.7
WHI3YNL197C SCT1P32784 759 aa4.41□□□□□ -1.7
WHI3YNL197C YEL1P34225 687 aa4.41□□□□□ -1.7
WHI3YNL197C GPP1P41277 250 aaKnown RBP4.41□□□□□ -1.7
WHI3YNL197C OYE3P41816 400 aaPredicted RBP4.41□□□□□ -1.7
WHI3YNL197C CCT8P47079 568 aaKnown RBP4.41□□□□□ -1.7
WHI3YNL197C HXT16P47185 567 aa4.41□□□□□ -1.7
WHI3YNL197C MET7Q08645 548 aa4.41□□□□□ -1.7
WHI3YNL197C RAD18P10862 487 aa4.4□□□□□ -1.7
WHI3YNL197C SFL1P20134 766 aa4.4□□□□□ -1.7
WHI3YNL197C MIH1P23748 554 aa4.4□□□□□ -1.7
WHI3YNL197C CDC48P25694 835 aaKnown RBP4.4□□□□□ -1.7
WHI3YNL197C FUN30P31380 1131 aa4.4□□□□□ -1.7
WHI3YNL197C PGM1P33401 570 aaKnown RBP4.4□□□□□ -1.7
WHI3YNL197C WHI3P34761 661 aaKnown RBP4.4□□□□□ -1.7
WHI3YNL197C PCM1P38628 557 aaKnown RBP4.4□□□□□ -1.7
WHI3YNL197C SLN1P39928 1220 aaPredicted RBP4.4□□□□□ -1.7
WHI3YNL197C MMM1P41800 426 aa4.4□□□□□ -1.7
WHI3YNL197C HFM1P51979 1187 aa4.4□□□□□ -1.7
WHI3YNL197C PEX8P53248 589 aa4.4□□□□□ -1.7
WHI3YNL197C ALO1P54783 526 aaKnown RBP4.4□□□□□ -1.7
WHI3YNL197C MTQ2Q03920 221 aaPredicted RBP4.4□□□□□ -1.7
WHI3YNL197C RSC58Q07979 502 aa4.4□□□□□ -1.7
WHI3YNL197C ABZ1P37254 787 aaPredicted RBP4.4□□□□□ -1.71
WHI3YNL197C CCZ1P38273 704 aa4.4□□□□□ -1.71
WHI3YNL197C AKR1P39010 764 aa4.4□□□□□ -1.71
WHI3YNL197C PEX7P39108 375 aa4.4□□□□□ -1.71
WHI3YNL197C DAM1P53267 343 aa4.4□□□□□ -1.71
WHI3YNL197C SDH1Q00711 640 aa4.4□□□□□ -1.71
WHI3YNL197C RIB2Q12362 591 aaKnown RBP4.4□□□□□ -1.71
WHI3YNL197C MDL2P33311 773 aa4.39□□□□□ -1.71
WHI3YNL197C TYS1P36421 394 aaKnown RBP4.39□□□□□ -1.71
WHI3YNL197C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
WHI3YNL197C PER1P25625 357 aa4.38□□□□□ -1.71
WHI3YNL197C YAP1801P38856 637 aa4.38□□□□□ -1.71
WHI3YNL197C CIT3P43635 486 aa4.38□□□□□ -1.71
WHI3YNL197C COG6P53959 839 aa4.38□□□□□ -1.71
WHI3YNL197C TOP1P04786 769 aa4.38□□□□□ -1.71
WHI3YNL197C EUG1P32474 517 aa4.38□□□□□ -1.71
WHI3YNL197C STO1P34160 861 aaKnown RBP4.38□□□□□ -1.71
WHI3YNL197C YJR096WP47137 282 aa4.38□□□□□ -1.71
WHI3YNL197C ATG33Q06485 197 aa4.38□□□□□ -1.71
WHI3YNL197C FAP7Q12055 197 aaPredicted RBP4.38□□□□□ -1.71
WHI3YNL197C SVS1Q12254 260 aa4.38□□□□□ -1.71
WHI3YNL197C MPH2P0CD99 609 aa4.37□□□□□ -1.71
WHI3YNL197C HOG1P32485 435 aa4.37□□□□□ -1.71
WHI3YNL197C ECM21P38167 1117 aaKnown RBP4.37□□□□□ -1.71
WHI3YNL197C YBR071WP38243 211 aa4.37□□□□□ -1.71
WHI3YNL197C TPM2P40414 161 aa4.37□□□□□ -1.71
WHI3YNL197C TAD1P53065 400 aa4.37□□□□□ -1.71
WHI3YNL197C SNP1Q00916 300 aaPredicted RBP4.37□□□□□ -1.71
WHI3YNL197C YOR059CQ08448 450 aaKnown RBP4.37□□□□□ -1.71
WHI3YNL197C HMG1P12683 1054 aa4.36□□□□□ -1.71
WHI3YNL197C YCL002CP25565 263 aa4.36□□□□□ -1.71
WHI3YNL197C SAF1P38352 637 aa4.36□□□□□ -1.71
WHI3YNL197C NUG1P40010 520 aaKnown RBP4.36□□□□□ -1.71
WHI3YNL197C NIT3P49954 291 aa4.36□□□□□ -1.71
WHI3YNL197C AIM14P53109 570 aa4.36□□□□□ -1.71
WHI3YNL197C RCM1P53972 490 aa4.36□□□□□ -1.71
WHI3YNL197C TGL2P54857 326 aa4.36□□□□□ -1.71
WHI3YNL197C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
WHI3YNL197C LRS4Q04087 347 aaKnown RBP4.36□□□□□ -1.71
WHI3YNL197C YPR053CQ6Q5F3 151 aa4.36□□□□□ -1.71
WHI3YNL197C GRX7P38068 203 aa4.36□□□□□ -1.71
WHI3YNL197C YDR514CQ04408 483 aa4.36□□□□□ -1.71
WHI3YNL197C COG8Q04632 607 aa4.36□□□□□ -1.71
WHI3YNL197C TRE1Q08919 783 aa4.36□□□□□ -1.71
WHI3YNL197C YBR182C-AQ8TGU6 64 aa4.36□□□□□ -1.71
WHI3YNL197C RPC82P32349 654 aa4.35□□□□□ -1.71
WHI3YNL197C HDA1P53973 706 aa4.35□□□□□ -1.71
WHI3YNL197C HFD1Q04458 532 aa4.35□□□□□ -1.71
WHI3YNL197C YDR338CQ05497 695 aa4.35□□□□□ -1.71
WHI3YNL197C GUP2Q08929 609 aa4.35□□□□□ -1.71
WHI3YNL197C DAL7P21826 554 aa4.34□□□□□ -1.71
WHI3YNL197C URA1P28272 314 aaPredicted RBP4.34□□□□□ -1.71
WHI3YNL197C SKN7P38889 622 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 91.3 ms