RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W LCD1Q04377 747 aa4.59□□□□□ -1.67
SRP1YNL189W YLR125WQ12138 136 aa4.59□□□□□ -1.67
SRP1YNL189W YLL058WQ12198 575 aa4.59□□□□□ -1.67
SRP1YNL189W YDL177CQ12257 170 aa4.59□□□□□ -1.67
SRP1YNL189W GYP7P48365 746 aa4.58□□□□□ -1.68
SRP1YNL189W HSV2P50079 448 aaPredicted RBP4.58□□□□□ -1.68
SRP1YNL189W LRG1P35688 1017 aa4.57□□□□□ -1.68
SRP1YNL189W SPC42P36094 363 aa4.57□□□□□ -1.68
SRP1YNL189W YAP1801P38856 637 aa4.57□□□□□ -1.68
SRP1YNL189W YER158CP40095 573 aa4.57□□□□□ -1.68
SRP1YNL189W NRD1P53617 575 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
SRP1YNL189W ORC3P54790 616 aa4.57□□□□□ -1.68
SRP1YNL189W OSW2Q12202 724 aa4.57□□□□□ -1.68
SRP1YNL189W PHR1P05066 565 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
SRP1YNL189W CMP2P14747 604 aa4.57□□□□□ -1.68
SRP1YNL189W FUN30P31380 1131 aa4.57□□□□□ -1.68
SRP1YNL189W REC104P33323 182 aa4.57□□□□□ -1.68
SRP1YNL189W BRN1P38170 754 aa4.57□□□□□ -1.68
SRP1YNL189W GYP8P43570 497 aa4.57□□□□□ -1.68
SRP1YNL189W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
SRP1YNL189W CYC1P00044 109 aaPredicted RBP4.56□□□□□ -1.68
SRP1YNL189W MEF1P25039 761 aa4.56□□□□□ -1.68
SRP1YNL189W MSH2P25847 964 aa4.56□□□□□ -1.68
SRP1YNL189W ECM21P38167 1117 aaKnown RBP4.56□□□□□ -1.68
SRP1YNL189W YKE2P52553 114 aa4.56□□□□□ -1.68
SRP1YNL189W PLB2Q03674 706 aa4.56□□□□□ -1.68
SRP1YNL189W YPR196WQ06595 470 aa4.56□□□□□ -1.68
SRP1YNL189W GAL10P04397 699 aa4.55□□□□□ -1.68
SRP1YNL189W CDC48P25694 835 aaKnown RBP4.55□□□□□ -1.68
SRP1YNL189W POL12P38121 705 aaPredicted RBP4.55□□□□□ -1.68
SRP1YNL189W MNN1P39106 762 aa4.55□□□□□ -1.68
SRP1YNL189W TY4A-JP47023 414 aa4.55□□□□□ -1.68
SRP1YNL189W MSC2Q03455 724 aa4.55□□□□□ -1.68
SRP1YNL189W RSM24Q03976 319 aa4.55□□□□□ -1.68
SRP1YNL189W NTG2Q08214 380 aa4.55□□□□□ -1.68
SRP1YNL189W ENV7Q12003 364 aa4.55□□□□□ -1.68
SRP1YNL189W RAD53P22216 821 aa4.54□□□□□ -1.68
SRP1YNL189W SRP101P32916 621 aa4.54□□□□□ -1.68
SRP1YNL189W MAC1P35192 417 aa4.54□□□□□ -1.68
SRP1YNL189W YKR078WP36158 585 aaKnown RBP4.54□□□□□ -1.68
SRP1YNL189W ALG2P43636 503 aa4.54□□□□□ -1.68
SRP1YNL189W CCM1P48237 864 aaPredicted RBP4.54□□□□□ -1.68
SRP1YNL189W FOL2P51601 243 aaKnown RBP4.54□□□□□ -1.68
SRP1YNL189W KIN2P13186 1147 aaKnown RBP4.54□□□□□ -1.68
SRP1YNL189W YBR238CP38330 731 aaKnown RBP4.54□□□□□ -1.68
SRP1YNL189W YGR283CP53336 341 aaPredicted RBP4.54□□□□□ -1.68
SRP1YNL189W ROT1Q03691 256 aa4.54□□□□□ -1.68
SRP1YNL189W DFG16Q99234 619 aa4.54□□□□□ -1.68
SRP1YNL189W DNM1P54861 757 aa4.53□□□□□ -1.68
SRP1YNL189W SIZ1Q04195 904 aa4.53□□□□□ -1.68
SRP1YNL189W CDA1Q06702 301 aa4.53□□□□□ -1.68
SRP1YNL189W NOT3P06102 836 aaKnown RBP4.52□□□□□ -1.69
SRP1YNL189W ENA1P13587 1091 aa4.52□□□□□ -1.69
SRP1YNL189W RPD3P32561 433 aa4.52□□□□□ -1.69
SRP1YNL189W SPC29P33419 253 aa4.52□□□□□ -1.69
SRP1YNL189W GCV2P49095 1034 aa4.52□□□□□ -1.69
SRP1YNL189W ENA2Q01896 1091 aa4.52□□□□□ -1.69
SRP1YNL189W POB3Q04636 552 aaKnown RBP4.52□□□□□ -1.69
SRP1YNL189W ENA5Q12691 1091 aa4.52□□□□□ -1.69
SRP1YNL189W MDM12Q92328 271 aa4.52□□□□□ -1.69
SRP1YNL189W YCL002CP25565 263 aa4.51□□□□□ -1.69
SRP1YNL189W PEX6P33760 1030 aa4.51□□□□□ -1.69
SRP1YNL189W DSS1P39112 969 aa4.51□□□□□ -1.69
SRP1YNL189W ZRG8P40021 1076 aa4.51□□□□□ -1.69
SRP1YNL189W YJR142WP47173 342 aa4.51□□□□□ -1.69
SRP1YNL189W GTF1P53260 183 aaPredicted RBP4.51□□□□□ -1.69
SRP1YNL189W CDC9P04819 755 aa4.5□□□□□ -1.69
SRP1YNL189W VBA3P25594 458 aa4.5□□□□□ -1.69
SRP1YNL189W PER1P25625 357 aa4.5□□□□□ -1.69
SRP1YNL189W SEG2P34250 1132 aa4.5□□□□□ -1.69
SRP1YNL189W EMC3P36039 253 aa4.5□□□□□ -1.69
SRP1YNL189W YGR012WP53206 393 aa4.5□□□□□ -1.69
SRP1YNL189W HDA1P53973 706 aa4.5□□□□□ -1.69
SRP1YNL189W DOS2P54858 310 aa4.5□□□□□ -1.69
SRP1YNL189W SSL1Q04673 461 aaPredicted RBP4.5□□□□□ -1.69
SRP1YNL189W MET7Q08645 548 aa4.5□□□□□ -1.69
SRP1YNL189W RFA1P22336 621 aaKnown RBP4.5□□□□□ -1.69
SRP1YNL189W MND2P40577 368 aa4.5□□□□□ -1.69
SRP1YNL189W MRPL22P53881 309 aa4.5□□□□□ -1.69
SRP1YNL189W TFB2Q02939 513 aa4.5□□□□□ -1.69
SRP1YNL189W LRS4Q04087 347 aaKnown RBP4.5□□□□□ -1.69
SRP1YNL189W WHI4Q07655 649 aaKnown RBP4.5□□□□□ -1.69
SRP1YNL189W MPH2P0CD99 609 aa4.49□□□□□ -1.69
SRP1YNL189W DAL7P21826 554 aa4.49□□□□□ -1.69
SRP1YNL189W STE13P33894 931 aa4.49□□□□□ -1.69
SRP1YNL189W CEP3P40969 608 aa4.49□□□□□ -1.69
SRP1YNL189W TAD1P53065 400 aa4.49□□□□□ -1.69
SRP1YNL189W UGO1Q03327 502 aa4.49□□□□□ -1.69
SRP1YNL189W SGD1Q06132 899 aa4.49□□□□□ -1.69
SRP1YNL189W NOP14Q99207 810 aaKnown RBP4.49□□□□□ -1.69
SRP1YNL189W RPL8AP17076 256 aaKnown RBP4.48□□□□□ -1.69
SRP1YNL189W LAM1P38851 1228 aa4.48□□□□□ -1.69
SRP1YNL189W RAI1P53063 387 aaKnown RBP4.48□□□□□ -1.69
SRP1YNL189W TPO1Q07824 586 aa4.48□□□□□ -1.69
SRP1YNL189W HSF1P10961 833 aa4.47□□□□□ -1.69
SRP1YNL189W URA1P28272 314 aaPredicted RBP4.47□□□□□ -1.69
SRP1YNL189W MTC2P34246 357 aa4.47□□□□□ -1.69
SRP1YNL189W MEF2P39677 819 aa4.47□□□□□ -1.69
SRP1YNL189W DAM1P53267 343 aa4.47□□□□□ -1.69
SRP1YNL189W SNO2P53823 222 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms