RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	MSS4	P38994	779 aa		4.17	□□□□□ -1.74
TIF11	YMR260C	CCC2	P38995	1004 aa		4.17	□□□□□ -1.74
TIF11	YMR260C	PSP2	P50109	593 aa	Known RBP	4.17	□□□□□ -1.74
TIF11	YMR260C	SVF1	Q05515	481 aa		4.17	□□□□□ -1.74
TIF11	YMR260C	ENB1	Q08299	606 aa		4.17	□□□□□ -1.74
TIF11	YMR260C	SRP101	P32916	621 aa		4.16	□□□□□ -1.74
TIF11	YMR260C	GYP7	P48365	746 aa		4.16	□□□□□ -1.74
TIF11	YMR260C	KIN4	Q01919	800 aa		4.16	□□□□□ -1.74
TIF11	YMR260C	ESC2	Q06340	456 aa		4.16	□□□□□ -1.74
TIF11	YMR260C	GUP2	Q08929	609 aa		4.16	□□□□□ -1.74
TIF11	YMR260C	PIN2	Q12057	282 aa		4.16	□□□□□ -1.74
TIF11	YMR260C	RAD53	P22216	821 aa		4.15	□□□□□ -1.75
TIF11	YMR260C	ABD1	P32783	436 aa	Predicted RBP	4.15	□□□□□ -1.75
TIF11	YMR260C	YKR078W	P36158	585 aa	Known RBP	4.15	□□□□□ -1.75
TIF11	YMR260C	NCS6	P53088	359 aa		4.15	□□□□□ -1.75
TIF11	YMR260C	SRP1	Q02821	542 aa	Known RBP	4.15	□□□□□ -1.75
TIF11	YMR260C	GDE1	Q02979	1223 aa		4.15	□□□□□ -1.75
TIF11	YMR260C	SHE9	Q04172	456 aa		4.15	□□□□□ -1.75
TIF11	YMR260C	NPC2	Q12408	173 aa		4.15	□□□□□ -1.75
TIF11	YMR260C	PFK1	P16861	987 aa	Known RBP	4.14	□□□□□ -1.75
TIF11	YMR260C	YBR238C	P38330	731 aa	Known RBP	4.14	□□□□□ -1.75
TIF11	YMR260C	SAH1	P39954	449 aa	Known RBP	4.14	□□□□□ -1.75
TIF11	YMR260C	NPP2	P39997	493 aa		4.14	□□□□□ -1.75
TIF11	YMR260C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
TIF11	YMR260C	VPS16	Q03308	798 aa		4.14	□□□□□ -1.75
TIF11	YMR260C	LAS17	Q12446	633 aa		4.13	□□□□□ -1.75
TIF11	YMR260C	HRR25	P29295	494 aa	Known RBP	4.12	□□□□□ -1.75
TIF11	YMR260C	YER158C	P40095	573 aa		4.12	□□□□□ -1.75
TIF11	YMR260C	BUL1	P48524	976 aa		4.12	□□□□□ -1.75
TIF11	YMR260C	YKE2	P52553	114 aa		4.12	□□□□□ -1.75
TIF11	YMR260C	FAL1	Q12099	399 aa	Known RBP	4.12	□□□□□ -1.75
TIF11	YMR260C	TSL1	P38427	1098 aa	Known RBP	4.11	□□□□□ -1.75
TIF11	YMR260C	MBP1	P39678	833 aa		4.11	□□□□□ -1.75
TIF11	YMR260C	AIM39	Q08223	395 aa		4.11	□□□□□ -1.75
TIF11	YMR260C	UPC2	Q12151	913 aa		4.11	□□□□□ -1.75
TIF11	YMR260C	KAR4	P25583	335 aa		4.1	□□□□□ -1.75
TIF11	YMR260C	OAR1	P35731	278 aa		4.1	□□□□□ -1.75
TIF11	YMR260C	SIT1	P39980	628 aa		4.1	□□□□□ -1.75
TIF11	YMR260C	RAI1	P53063	387 aa	Known RBP	4.1	□□□□□ -1.75
TIF11	YMR260C	SFB2	P53953	876 aa		4.1	□□□□□ -1.75
TIF11	YMR260C	DUS3	Q06053	668 aa	Known RBP	4.1	□□□□□ -1.75
TIF11	YMR260C	OPI10	Q08202	246 aa		4.1	□□□□□ -1.75
TIF11	YMR260C	EFT1	P32324	842 aa	Known RBP	4.09	□□□□□ -1.75
TIF11	YMR260C	STE14	P32584	239 aa		4.09	□□□□□ -1.75
TIF11	YMR260C	MRP8	P35719	219 aa		4.09	□□□□□ -1.75
TIF11	YMR260C	VBA5	P36172	582 aa		4.09	□□□□□ -1.75
TIF11	YMR260C	MAD1	P40957	749 aa		4.09	□□□□□ -1.75
TIF11	YMR260C	CDC48	P25694	835 aa	Known RBP	4.08	□□□□□ -1.76
TIF11	YMR260C	WHI4	Q07655	649 aa	Known RBP	4.08	□□□□□ -1.76
TIF11	YMR260C	FBP1	P09201	348 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	SCT1	P32784	759 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	AFR1	P33304	620 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	YKL069W	P36088	180 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	KTR4	P38131	464 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	MOH1	P38191	138 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	PBY1	P38254	753 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	TPO2	P53283	614 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	CWC24	P53769	259 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	PPM2	Q08282	695 aa		4.07	□□□□□ -1.76
TIF11	YMR260C	TRP4	P07285	380 aa	Predicted RBP	4.06	□□□□□ -1.76
TIF11	YMR260C	NPP1	P25353	742 aa		4.06	□□□□□ -1.76
TIF11	YMR260C	SED4	P25365	1065 aa		4.06	□□□□□ -1.76
TIF11	YMR260C	YPT53	P36019	220 aa		4.06	□□□□□ -1.76
TIF11	YMR260C	YLR040C	Q07988	224 aa		4.06	□□□□□ -1.76
TIF11	YMR260C	STE13	P33894	931 aa		4.05	□□□□□ -1.76
TIF11	YMR260C	IRR1	P40541	1150 aa		4.05	□□□□□ -1.76
TIF11	YMR260C	SLU7	Q02775	382 aa	Known RBP	4.05	□□□□□ -1.76
TIF11	YMR260C	BUL2	Q03758	920 aa	Known RBP	4.05	□□□□□ -1.76
TIF11	YMR260C	YPR196W	Q06595	470 aa		4.05	□□□□□ -1.76
TIF11	YMR260C	YDR306C	Q06640	478 aa		4.05	□□□□□ -1.76
TIF11	YMR260C	OMS1	Q06668	471 aa		4.05	□□□□□ -1.76
TIF11	YMR260C	NOT3	P06102	836 aa	Known RBP	4.04	□□□□□ -1.76
TIF11	YMR260C	PPH3	P32345	308 aa		4.04	□□□□□ -1.76
TIF11	YMR260C	SPF1	P39986	1215 aa	Known RBP	4.04	□□□□□ -1.76
TIF11	YMR260C	ERG5	P54781	538 aa		4.04	□□□□□ -1.76
TIF11	YMR260C	YOL073C	Q08232	322 aa		4.04	□□□□□ -1.76
TIF11	YMR260C	ADE8	P04161	214 aa		4.03	□□□□□ -1.76
TIF11	YMR260C	PRP9	P19736	530 aa	Known RBP	4.03	□□□□□ -1.76
TIF11	YMR260C	ERG4	P25340	473 aa		4.03	□□□□□ -1.76
TIF11	YMR260C	CCM1	P48237	864 aa	Predicted RBP	4.03	□□□□□ -1.76
TIF11	YMR260C	JIP5	Q06214	492 aa	Predicted RBP	4.03	□□□□□ -1.76
TIF11	YMR260C	AAR2	P32357	355 aa	Predicted RBP	4.02	□□□□□ -1.77
TIF11	YMR260C	CTF8	P38877	133 aa		4.02	□□□□□ -1.77
TIF11	YMR260C	SDP1	P40479	209 aa		4.02	□□□□□ -1.77
TIF11	YMR260C	VPS30	Q02948	557 aa		4.02	□□□□□ -1.77
TIF11	YMR260C	PRI2	P20457	528 aa		4.01	□□□□□ -1.77
TIF11	YMR260C	CAD1	P24813	409 aa	Known RBP	4.01	□□□□□ -1.77
TIF11	YMR260C	SEC21	P32074	935 aa	Known RBP	4.01	□□□□□ -1.77
TIF11	YMR260C	HBS1	P32769	611 aa	Known RBP	4.01	□□□□□ -1.77
TIF11	YMR260C	YRO2	P38079	344 aa		4.01	□□□□□ -1.77
TIF11	YMR260C	PFD1	P46988	109 aa		4.01	□□□□□ -1.77
TIF11	YMR260C	LCD1	Q04377	747 aa		4.01	□□□□□ -1.77
TIF11	YMR260C	PPR1	P07272	904 aa	Predicted RBP	4	□□□□□ -1.77
TIF11	YMR260C	STE5	P32917	917 aa		4	□□□□□ -1.77
TIF11	YMR260C	SUL1	P38359	859 aa		4	□□□□□ -1.77
TIF11	YMR260C	QRI1	P43123	477 aa	Known RBP	4	□□□□□ -1.77
TIF11	YMR260C	UBA2	P52488	636 aa		4	□□□□□ -1.77
TIF11	YMR260C	SNU71	P53207	620 aa	Known RBP	4	□□□□□ -1.77
TIF11	YMR260C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	RIP-Chip
TIF11	YMR260C	RNT1	Q02555	471 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms